ZMP

usp42

Ensembl ID:

ENSDARG00000077300

ZFIN ID:

ZDB-GENE-030131-5739

Description:

Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL;Acc:Q802X0]

Human Orthologue:

USP42

Human Description:

ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:20068]

Mouse Orthologue:

Usp42

Mouse Description:

ubiquitin specific peptidase 42 Gene [Source:MGI Symbol;Acc:MGI:1924050]

Alleles

There are 6 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa10774	Essential Splice Site	Available for shipment	Available now
sa35249	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa10774

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
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Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000003375	Essential Splice Site	464	1047	12	16
ENSDART00000134597	None	None	74	None	4

Genomic Location (Zv9):

Chromosome 12 (position 18652169)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	12	17462746
GRCz11	12	17584620

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TACCACCACGTCCTTCATTGGCCCTCAACTGCCACCTCATATGCTGAAGG[T/A]AMTGCAAGACAATRAAACATCCTAGCAAAATCAGCACTGTGATGGATGTT

Long Flanking Sequence:

GTTCATTCTGGGTTCAGTTGCCACGCTGGACATTACTACTGCTACATTAAGGTATGTTGTCAAGAGCAGAACTGTATTCTTCTTTACTTTAATAGAATTTATAAATTAACATATTTATTTAATTGACCCTTTTATTTTAGGCTAGCAATGGGCAGTGGTATCAGATGAATGACTCGTCGGTATCTCTCAGCGATATAAGAACAGTTCTTAACCAACAAGCATACTTGCTCTTCTACATCAGGTAATATTCAAAATTCATTTGTCTCTTAAATGGGTAGTTAGTTGTATGAATGGAACTAAAAAAGATTCTGACAATTCATCAAAAAAATCTCCGTGTTAATTCAGGTCACCTGATGTAAAAAATGGAGGCGACTTTAGCCAGATGAACCATACTCCAGGTCAGTCTTCTCCAAGACCATCCATTCCACTCAAGATGAATGGGCCTCAGTATACCACCACGTCCTTCATTGGCCCTCAACTGCCACCTCATATGCTGAAGG[T/A]ACTGCAAGACAATGAAACATCCTAGCAAAATCAGCACTGTGATGGATGTTTTGAAAAATGTAGCTACAGGAAGAACTTTAAGTTATTTATTATATATCGGACTGAAAAATCATAAATGTAATTTTTTTTGTGTTACTGAATTATGAAGTTGTAATTACTATGTAATATGTTTTTATCTATATTAATCTTGCCATAAGTTCATAAGAAGGAACGTTCATAAGAATAAGTTCAGCCTTGATAAGCTTTTGTTTTTTCAATTTCTTCTGTTAAACTGGTCATTGTTTTTGCAGAACTCGTCATATGTTAATGGAAATGGTTCTTCAAAGGAATACCATGGTGGCTCTAAACCCAACAGAAATTTTGGTGGTGTGACCAAAATAGGCCCATCTCATACATCTTCCTCTGCATCTGCGTCCTCTTCTTCTTTGCCTGTTCGGTCCATGGGCATTCCAGATTCATCCAAAAGGCCGAAGCTGACGTTTCTCATTGGTCAAGGCAAA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa35249

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000003375	Nonsense	857	1047	15	16
ENSDART00000134597	None	None	74	None	4

Genomic Location (Zv9):

Chromosome 12 (position 18649251)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	12	17459828
GRCz11	12	17581702

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GAGGTCAGGTGAGGACCGGAACAGAGGGTCAGATCGACCACATTTTTCTT[C/A]AACCCCGAAGGACAGGGAACGATACAGGCACTATAGGGATCATAGTGATA

Long Flanking Sequence:

ATCTTAATTTTTTGTGTCCTCAATCCGAGGCCATTTCTCATGTAATAAACTTCTTTTGGGTTTTCTTCATTCATTCAGAAGCTCCAATCCAGCAAGTTCTGATGACCATCCTTGTTCCTCACCTTCAAACAAAAGGTTGAACCTTCCTTCTGAGTCTTCATCTCAGTCTGTGGCACAGATACAATCTTCACCTAAAGAATCACTAGTCTTAAAGACTACAGATACTGACCTTCATACCGAGACCGCTTCTAAAGTTGAGTTGACTCAGAGGCATGCTACGCATACAGCAACTGGCACGTCAGACCTTCAGGTCAACAACAATGTTAGCCTTCATGTTAGTCATGGTCACACGAGTCCACACAAGTTAAAGGAGGTGTACAGGTGCAGTGAAGGAGAGAGCAAAGAGGCAAAACCATCACACTCAGACAAATTTGGCTCTGGAGATGGATGGAGGTCAGGTGAGGACCGGAACAGAGGGTCAGATCGACCACATTTTTCTT[C/A]AACCCCGAAGGACAGGGAACGATACAGGCACTATAGGGATCATAGTGATAGAAGCCGGAGTCGCTATGGGCACAGCTATCAAGATAGTCGTCGCTCCACCAGTAGAGAGCGCTATTATAGAGATCGAGATTTGGAGAGACACTGGGACAGATTCTCACACCACCGTCGAGAGCACCATTATTTCCAGAGAAGACACCGAGATGAACGCGACTGGAATAGAGATCGTAGGTTTGGGAGTGACTCTTATCGCCCTTCTGGATACCATAACAGGAATGGATATTCCAATCACAGTCATCGTGGGATGGAAGAGGCCCATGGAAGAGCGACTCATACAGTGAACGGTTCAAAAGGCAGGCCCTCGTCACCTCATTCCGTTAGTCCACTTCCTAGACATCACAAGCGGAAACGCAGTCCATCGGTTGATGCAAGGGAAAGTTCTGATGAGTGCAAAGCAAAGAAATCCAAAAAGAAAAAGAGAAACAAAGATAAACACAGGTAAG

Associated Phenotype:

Not determined