ZMP

LOC562928

Ensembl ID:

ENSDARG00000031463

Human Orthologue:

SYT6

Human Description:

synaptotagmin VI [Source:HGNC Symbol;Acc:18638]

Mouse Orthologue:

Syt6

Mouse Description:

synaptotagmin VI Gene [Source:MGI Symbol;Acc:MGI:1859544]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa41836	Nonsense	Mutation detected in F1 DNA	Not yet available
sa38841	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa41836

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > G

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000048365	Nonsense	321	471	4	7

Genomic Location (Zv9):

Chromosome 11 (position 25591825)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	11	24420650
GRCz11	11	24658266

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ACTCTGCAGGAGAGTGTGGATCTCGGAGAGATAATGTTCTCTCTGTGCTA[C/G]TTGCCGACTGCAGGGAGACTCACACTTACAGTCATCAAATGTAGGAACCT

Long Flanking Sequence:

GGTCTTGGCCTATCATTTAAGCCATTTCTGATATCAAATGATCAAACAGAAGTCAATTTATTATTTGTTGTTCCTAAAACTTGCATAGGTGGCAAGACTTTTATTAGGTAGTGTATATACTATGGCGAATATATACTCACGCACTGATAGACTTTGGTCTGTTGGTAAAACCGGAGCACCAGGAGGAAACCCACACAAAGCTGTGGAGAACATCCAAACACCTCACAAAAATACGACCTGACCCGAACCAGTGACCTTCTTGCTGTCCAATCAATCAATCAATCAATCAGTCAACTGCTTTTGATAGTTATAATTAGGAGTATAGATCACCCCTACATGTGTTCATCATTTAATTCCATTCAAGTCATTTATAAATTAACATTATTTGTAACCATGGTAACTTTTTTGTAAGTACACCATTATGTAGTAGATTTGATACATGTTTGTTTGACTCTGCAGGAGAGTGTGGATCTCGGAGAGATAATGTTCTCTCTGTGCTA[C/G]TTGCCGACTGCAGGGAGACTCACACTTACAGTCATCAAATGTAGGAACCTCAAAGCTATGGATATTACTGGTTATTCAGGTATGCAGCTGTCCTCCTGTGCATCTTCATTTTCTCACATCTGTCGGCTTGCTTCCCTCTTCCTGTTTTACACTTGGACAGCCACATTTATCATTGTCAGAAAGTCAGACATATTAGGATCATGGGAAGACAAGGGGAAGATGTGTTGAGAAAAGTGTGTCACACCTCCCTGCTCTCTTGACAGATCCGTACGTGAAGGTTTCGCTGATTTGTGATGGGAGACGCTTGAAAAAGAAGAAAACGTCCATAAAAAAGAACACGCTGAATCCAACATACAATGAGGCGATCATCTTTGACATTCCCCCGGAGAATATGGATCAAGTCAGCTTACACATATCGGTTATGGACTACGATCTGTAAGTGCTATTTGAGTGTTTCTTTGTACAAACATCGGTAACACTTTACTTTAAGGTGCAGTAGA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa38841

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000048365	Essential Splice Site	348	471	5	7

Genomic Location (Zv9):

Chromosome 11 (position 25592087)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	11	24420912
GRCz11	11	24658528

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGGGGAAGATGTGTTGAGAAAAGTGTGTCACACCTCCCTGCTCTCTTGAC[A/T]GATCCGTACGTGAAGGTTTCGCTGATTTGTGATGGGAGACGCTTGAAAAA

Long Flanking Sequence:

CTGTCCAATCAATCAATCAATCAATCAGTCAACTGCTTTTGATAGTTATAATTAGGAGTATAGATCACCCCTACATGTGTTCATCATTTAATTCCATTCAAGTCATTTATAAATTAACATTATTTGTAACCATGGTAACTTTTTTGTAAGTACACCATTATGTAGTAGATTTGATACATGTTTGTTTGACTCTGCAGGAGAGTGTGGATCTCGGAGAGATAATGTTCTCTCTGTGCTACTTGCCGACTGCAGGGAGACTCACACTTACAGTCATCAAATGTAGGAACCTCAAAGCTATGGATATTACTGGTTATTCAGGTATGCAGCTGTCCTCCTGTGCATCTTCATTTTCTCACATCTGTCGGCTTGCTTCCCTCTTCCTGTTTTACACTTGGACAGCCACATTTATCATTGTCAGAAAGTCAGACATATTAGGATCATGGGAAGACAAGGGGAAGATGTGTTGAGAAAAGTGTGTCACACCTCCCTGCTCTCTTGAC[A/T]GATCCGTACGTGAAGGTTTCGCTGATTTGTGATGGGAGACGCTTGAAAAAGAAGAAAACGTCCATAAAAAAGAACACGCTGAATCCAACATACAATGAGGCGATCATCTTTGACATTCCCCCGGAGAATATGGATCAAGTCAGCTTACACATATCGGTTATGGACTACGATCTGTAAGTGCTATTTGAGTGTTTCTTTGTACAAACATCGGTAACACTTTACTTTAAGGTGCAGTAGATGATTGTCTTCAGAAACATGTATTGTTGTGCTAGTTTTAAAAGTCTCTTCACAATCCAATAGTGATGATTAAAGTAAATGATCTAAATGTGTTTATATGTATTTTATTCTTGGTAAGGCATAAAACTAAAAAATGTTCATCCAATTAAATATTGTCGGGCCAACATCTCCCATAATTCCGATAAGTAGCCCAAACTGTCTGGCAACAAATGTAGATTTGGACTGCTCATCTCTGTTCATGTATATCCACCATTAGCGTGTGC

Associated Phenotype:

Not determined