Busch Lab

ZMP

vcanb

Ensembl ID:
ENSDARG00000009401
ZFIN ID:
ZDB-GENE-030131-2185
Description:
versican b [Source:RefSeq peptide;Acc:NP_999853]
Human Orthologue:
VCAN
Human Description:
versican [Source:HGNC Symbol;Acc:2464]
Mouse Orthologue:
Vcan
Mouse Description:
versican Gene [Source:MGI Symbol;Acc:MGI:102889]

Alleles

There are 12 alleles of this gene:

Allele Name Consequence Status Availability
sa31805 Nonsense Available for shipment Available now
sa17214 Nonsense Available for shipment Available now
sa923 Nonsense Available for shipment Available now
sa847 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa31805
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000012522 Nonsense 826 1570 7 14
ENSDART00000134304 Nonsense 825 1569 8 15
Genomic Location (Zv9):
Chromosome 10 (position 44709219)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 43402807
GRCz11 10 43231187
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGCAACCATGAGTGAATTGCCCATATTTTCAACCAAATCTCCAAGCCAG[G/T]AGATAACCCCACAAGCCATATCATTTAGCACATCAATCAATGAAGAAAGT
Long Flanking Sequence:
TGACCCCTCCAATTGAAGAAATCATCCCTGACGATGAGATAGTAATTCTTATGTCAGAATTTGAAGGTGTTGTATCTTCCCCTAAAACAGATGAATCTGGCTTGACTACGAGAAGTCCAGTTGAGCCCCATTTCACAACAAAAATCTCAAAGCCAGACTTGGGCAGTGGAGATCTTGAAATATATTCTTCAGCTTCTGTTACCGTCACCCCAGAAGTGAGTTTCATTAATGGAAAGCATGAGTTGACCCTGAAACCAGACGTTGAACATGAGGCTAGAGGAGATCAGTTTGACACTGCGACCCCTCCAATGGAAGAAATTATTCCTGATGATGAGGTTGTAATAGTTCTGGCCGAAGCTGAAGGTCTTACATCTTCCTACAAAACGGATGAATCTGGCTTGACTACAAGAAGCCCAGTTGAGCCCTATTTCACAACAAAGATCTCAGAAAGTGCAACCATGAGTGAATTGCCCATATTTTCAACCAAATCTCCAAGCCAG[G/T]AGATAACCCCACAAGCCATATCATTTAGCACATCAATCAATGAAGAAAGTTCAGGGATGCGCCCAACAGATGATGAAGAGGAGCTGACTACATTGGAAGGCTCTGCGGATGACCTGCAGTCAGCTACAGCTTCTACTGACCCAGATATGGTGGCTACTGACGAGACTGAAATAGGTGGAACAGAGAAGCCTACACAGGCATATGGGGTGCATTGCTCCACCCAAGGACCAATTACAACTCCAGAAACATCTCAAACTACAGCATCCAGCCCTGTAGAAAAAGAAATAAAGCCGGAAAGAGATGATTTTGAGGGTTCCACCTCAGCAGAAGAAGAGAGCTCTGGACAAGATATGTATTCTCGAGAGGAACCAAAACAACCGATTTTATCTCCAACTCTCTCTGTTCCTTCTCACTCCTTTACAACTTCCTCAACAAGTACTCATCCCAAAGACCCAAGGGAACCTGCTAGTTTACTCTTGCCTAGTGCAGAGCCTGCAGTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17214
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000012522 Nonsense 1231 1570 7 14
ENSDART00000134304 Nonsense 1230 1569 8 15
Genomic Location (Zv9):
Chromosome 10 (position 44710434)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 43404022
GRCz11 10 43232402
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGACTGTTGTAGATTATGAAGATRTGCAGGGTGCCTCAGTTGTTGAAAGA[C/T]AAYCACCAATCAGGGAAGAGTTCACCACAAAWAAGCCAGAGGTCTGGACY
Long Flanking Sequence:
AAACTGTTGAAACTAGTGTTGATGCAAATGAACCAACTAAAGCATTTGAAGGTTCTGCTGAAGACACAACGCCATTGTCTTTCACCACTGCCCGAACTGAAACTAAATTCACAACACAAAGATCAGATGCTAGAATTCTGCCCACGGATAGTCTAAGAGCAATAATGTCTTCCTCCCAAGAAACTGTTCTAATCCAAAAAACTCATTCGGAAGAGACAACCACTTTAGTGGTGCCATCAGAGACTACAGAAGAGACGATGTTACCTTCTAAATTTGGATTCTCAACAGAGGAGCCTCTCATCTCAACGTCTGTACATTCCAGTGGCCCCATCACTATTGCTGATACAAATTTAAGCATTTCAGAGTCAGTCCAGGATATTACAAGTACTTCTTCTACAACAGAAGACATGATCACCACCCCTAAAGCCACAAGTACTTCGTCATTTGAAGAGACTGTTGTAGATTATGAAGATATGCAGGGTGCCTCAGTTGTTGAAAGA[C/T]AACCACCAATCAGGGAAGAGTTCACCACAAAAAAGCCAGAGGTCTGGACTGATTCCAGCTACACTGTGGAGAGCCATGTGGTGGATTTGCAAGGTAGAGTTTTGAGCTGTATTTTTGCAAAGCATACAGAATTTCCACAGTGCTGATTTGTCCATAGTGGATTTGTCCTTTCACTGAAAGTTATGACTTTGTTGTTTTAGATCACGCACTTTGCTCGGTCAGTGTGTGTGAAAACGGCGGAACATGCTTCTCCAGCAGAAAAGGAAATGTTTGTGTCTGCATGCCTGGATTTAGTGGGGAACGCTGTGAAAACGGTTTGTAGCTTTTAGCATTTTAAGTTTTATTCACTCTTGATGAACGCGTTTCTTGGTATAGTGGGACATTTTCATTTCCTATTTCCTGCAGATGTCGATGAATGCCAGTCGAATCCTTGCCGCAATGGTGCTACATGCATTGATGGAATGAACTCTTTCAAATGTGTCTGTCTGCCCAGCTATTCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa923
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000012522 Nonsense 1375 1570 10 14
ENSDART00000134304 Nonsense 1374 1569 11 15
Genomic Location (Zv9):
Chromosome 10 (position 44726579)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 43420167
GRCz11 10 43248547
KASP Assay ID:
554-0829.1 (used for ordering genotyping assays)
KASP Sequence:
CCCACCGGCGGACRTGGGAGGCAGCAGAAAGAGAGTGTCGTCTGCAGGGC[G/T]GACACCTGACCAGCGTCCTGTCCCACGAGGAGCAGCTCTTCGTAAATCGT
Long Flanking Sequence:
ACCACCTGCTTCATTATATATCATTATGCTATTACTACAGCCACGGTCAAGCTTTAAATAGAAAAATGATCTAATTTCAAGATGCTAATGGTCTAATCTGATTCAATGATTTATGCTAAGCTAAGCTATAAGTGTTCTTATCAGACCCGAAAATCGACTGAATGTACGCAAACATGGTAAAACCTAACTATTTAACTCTAGGAGAGCTTTAAATGAGCCTGTTTTTAAAAATAAAAGTGTTTTTCTTTATTTTACATTACAGCAGCTTATGCCGTTTGAATAGGAGTGCACAGGCTGATAGTGCTTGTGTTAGGGAAGCTACACGTCGGCTTTTATTCTCATTCAAATGTTAGTTTCTTATATCTCGATGTCTCTCATTTGAACTTTCAGATACGGAGGTGTGCGACTTTGGTTGGCAGAAGTTTCAGAGCCACTGCTATAAGTACTTCACCCACCGGCGGACATGGGAGGCAGCAGAAAGAGAGTGTCGTCTGCAGGGC[G/T]GACACCTGACCAGCGTCCTGTCCCACGAGGAGCAGCTCTTCGTAAATCGTAAGTTCTTCTTTATGAAATGTTTTATAGTGATTGTAAAGCTTATAGTATTCGACAAATTCTCCTCTCCGTATGCACCAGACACTTTCTTATCAACACTCCATACTTTTGGAAAATCCTGTCTTATAAGTTACAGATAAAAGTGTCTGCTATATAAATGGAGGGGGGGGGGGGGGTAGAAAGGGAAGAAGAAAGTTGCAGCCAATCTGCAGTAGGGGGTGTGTCCTCTAATGGTCACGGAGGAGGAAGTTGTATTCGATCAGCAGTAGGGGGTGTGTCCTAATTTTGGGGGAGAAAATTGTGGTCAAATCTGCAGTAGGGGGTGTGTCCTCTAATGGTCACGGAGGAGGAAGTTTTATTCGATTAGCTGTAGGGGGTGTGTCCTAATTTTGGGGGAGAAAATTGTGGTCAAATCTGCAGTAGGGGGTGTGTCCTTTTATGGTCACGAAGGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa847
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000012522 Essential Splice Site 1527 1570 13 14
ENSDART00000134304 Essential Splice Site 1526 1569 14 15
Genomic Location (Zv9):
Chromosome 10 (position 44737974)
Other Location(s):
Assembly Chromosome Position
GRCz10 10 43431562
GRCz11 10 43259942
KASP Assay ID:
554-0750.1 (used for ordering genotyping assays)
KASP Sequence:
ATGCAGAGAAGACGGACAGTGGGACAAGCCCAAAATCACATGCTTGAATC[G/A]TAAGTTGTATGAGTTATTCTGTATAAYAAAACTAAAGCCATGAAAACAAT
Long Flanking Sequence:
CATAACCTGAACATCATCTGAAAGTAACCTGAACATAACCAGAACATTACCAGAACAAAATTTAAATATAACCTGAAAATAAACTGATCCTATTTAACCTGAAAATAACTTAATTTAACATAACCTGAACAAAACCAGAACATAACCTGAACATATCCTGCAAATATCCTGAACATTACCAGAACATAACCTTAAAATAACCAGAACATAACCTAAACAAAACCAAAACATAACCCGAAAATAACCTTAACATTACTGTAATGTATCCACAACATAACCTGACCATAATATGAAAATATCTTTATCCTGTTTCCCAGTGTCCTGCGGTCAGCCTCCTCTCATAAAGGACGCTCAAGTCTATGGCAGCATGAAGCCGCGATACGAGATCAACTCTCTGGTTCGATATCACTGTAAAGAAGGCTTCATCCAGAGACATGTCCCTACTATCAGATGCAGAGAAGACGGACAGTGGGACAAGCCCAAAATCACATGCTTGAATC[G/A]TAAGTTGTATGAGTTATTCTGTATAATAAAACTAAAGCCATGAAAACAATTTAATATGTAACTTAATATTAATCTTTTTAAAAACATTTTTTATTTATTTTCTTGCAAACGTTTTATTATTTTAATTTTTTCATTTCTTCAATCAGATTTAAAATGTTATTTATTTATTTTTAGCTTTTAGTTCAAAATAAAAATTCACGCTAGACAAAAGAAGATATATATTGTAATAAAATACTCTTTAACATTTTATTTTACAAAAAAAGGTATAGATATTAATGAAATTTACTAAAAGATTAAAGACATTAGTGAATTATAGAGGACGAAACCTATTTAATTTTTATTTATTTATATATTTATTTATGCGGGAATTTGTGTATTTTATATATATATTCTTGTGTTTATTTGCATTTTTATTTATTGTTTTATTCATGCAAGAATTTGTGTTTTTATATATATTTATTTATTGATTTATTTATGCAGGCATTTTAGAATTTATTATT
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461