ZMP
si:ch211-187d7.3
Ensembl ID:
ZFIN ID:
Description:
LOC402861 protein [Source:UniProtKB/TrEMBL;Acc:Q6PFJ8]
Human Orthologue:
RAB11FIP1
Human Description:
RAB11 family interacting protein 1 (class I) [Source:HGNC Symbol;Acc:30265]
Mouse Orthologue:
Rab11fip1
Mouse Description:
RAB11 family interacting protein 1 (class I) Gene [Source:MGI Symbol;Acc:MGI:1923017]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa41731 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa21811 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa41731
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000052971 | Nonsense | 249 | 652 | 2 | 5 |
| ENSDART00000128156 | None | None | 116 | None | 1 |
Genomic Location (Zv9):
Chromosome 10 (position 42686640)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 41400194 |
| GRCz11 | 10 | 41322074 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCCAAAAAGAAGAACAAGCTCAAGTCTTTATTTGTACCCAAGTCTGGTT[T/A]GCAACGTAACATGTCGCAGTCCATGTCCACCCTCCCCACGCTGCCTGAAA
Long Flanking Sequence:
TCCAACTGGTTTTGGAATTTTGATTCTAAAGTTGCCCCAGTGTGACTACAAAGCCCAGTCCCATTCCATAATCTCATATCTTCCATCTTAGTCTTTTATCTTTGTCCTTTGATGACAGCAGTTCTGCAGGAAATGAAGAACGCCTGAAACCAAACATCCTGTTCTGTTTGTTTCCAACAGATGGTTCAAACTGTTGGGCAAGACAGGGAAGGCTGACAAAGACCGAGGAGAAGTCCTTCTAGACATCCAATTCATGAAGAACAACATGACGGCCAGCATGTACGATCTCTCCAGCCAGGATAAATCCCGCTCGCGCCTCGGCAAGCTCAAAGATAAACTGAAGGGGAAGAAGAAAGACGGGATGTCAGACTCCGCTTCCGCCATCGTGCCCTCAGTCGGACAGGTACTGACTGACAGCGAGGCCGAAGACGAGCAAAACAACACATCTGGAGCCAAAAAGAAGAACAAGCTCAAGTCTTTATTTGTACCCAAGTCTGGTT[T/A]GCAACGTAACATGTCGCAGTCCATGTCCACCCTCCCCACGCTGCCTGAAAAAGACTCAGCCATCAGTCTGAGCAGATCATCTGGCCTCAACGTAGAGTCTCCTGAAGGTAACATTTACAGCTTTATAGATGTGTGATTTCAGATTTTTCTTGTGGCTCAAACAGAAGACAGTGTGCTAGAAATAGCAATGTTATGAGTTCCAGTCAATGCATTATCTATTAAATTTGTGTCTGTCTCACTCTGAAAGCATTGGCCAAATGCAGAATGTGATGTAAATAATAATGTTGTATCAATATTAGTGAGACCAGCAAGATAAATTCTAGACATCTCCACTATCATATATACACTACCTGACAAAAGTCTTGTCGCCTATCCAAGTTTTAGGAACAACAGATAATAAGTTGACTTCTAGTTGATCATTTGGTATCAGAAGTGGCTTATATAAAAGGTAAAGGCCTCTAGATGGCGCTTATTTGACCAAAATAAAATATGATCATGCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21811
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000052971 | Essential Splice Site | 492 | 652 | 3 | 5 |
| ENSDART00000128156 | None | None | 116 | None | 1 |
Genomic Location (Zv9):
Chromosome 10 (position 42682140)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 41395694 |
| GRCz11 | 10 | 41317574 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAGGAAGAAGCTAGAGGAAGAGGAGAGGAAAAGAGTTGCGAGAGAGGAG[G/A]AAAGAAAGAGGGAAGAGGAAAAGAGACGAGAGGAAGAGAAGAGGAAGAAG
Long Flanking Sequence:
AAGAGCCAGAGACCAGAGGATCCAGAGCCGGTTCAACCTTCAGTCTGAACAGCTCAGGACATGGGTCAATGGAGGACCTGCGCAGAGGTCACGACAGAAAAACCTCCAACACGTCTGTGGACTCGCTTAAAACCTCTGAGCTGCACACCCAAGAGAAAACAGTGGAGGACATGCACAGGAGACAAGAAGAACAGAGGAAGCAGGAAGAGGAAGTTAGGAAGAGACTGGAGGAAGAAGAGAGGATGGAACGGTTGGAGAGGGAGGAAGAGATGAGGAAGCTGGAGAAACAAGAAGAGGAGAGGAAAAGGATTGCGAGAGAGGAGGAAAAGAAACGAGAGGAAGAGAAGAGGAAGAAGCTAGAGGAAGAGGAAGTGGAGAGGAAAAGGATTGCGAGAGAGGAGGAAAGAAAGAGGATGGAGAGGGAAGAGGAAAAGAAACGAGAGGAAGAGAAGAGGAAGAAGCTAGAGGAAGAGGAGAGGAAAAGAGTTGCGAGAGAGGAG[G/A]AAAGAAAGAGGGAAGAGGAAAAGAGACGAGAGGAAGAGAAGAGGAAGAAGCTAGAGGAAGAGGAAGTGGAGAGGAAAAGGGTTGCGAGAGAGGAGGAAAGAAAGAGGGAAGAGGAAAAGAGACGAGAGGAAGAGAAGAGGAAGAAGCTAGAGGAAGAGGAAGTGGAGAGGAAAAGGGTTGCGAGAGAGGAGGAAAGAAAGAGGGAAGAGGAAAAGAGACGAGAGGAAGAGAAGAGGAAGAAGCTAGAGGAAGAGGAAGTGGAGAGGAAAAGGGTTGCGAGAGAGGAGGAAAGAAAGAGGGAAGAGGAGAGGAAACGAGAGGAAGAGAGAAAAAGGATTGCAATGGAGGAGGAAGGAAGAAGAATGGAGAGGGAACAGGAAGAGAAGAGGAAGCTAGTGAAACTGGAAGAGGAAAAGAGAAGGGTTGAGGAAGAACGGATGAGGATTGAGCAGGAACAAAAGATCAGAGGGAGGAAGGAAGAGGAAATGAGAAAGGCAGAG
Associated Phenotype:
Not determined