ZMP
si:ch211-124n19.2
Ensembl ID:
ZFIN ID:
Description:
Novel prptein similar to vertebrate SH3 domain containing ring finger 1 (SH3RF1) [Source:UniProtKB/T
Human Orthologue:
SH3RF3
Human Description:
SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:24699]
Mouse Orthologue:
Sh3rf3
Mouse Description:
SH3 domain containing ring finger 3 Gene [Source:MGI Symbol;Acc:MGI:2444637]
Alleles
There are 3 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa14831 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa41560 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa14831
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085042 | Nonsense | 11 | 675 | 1 | 17 |
ENSDART00000133366 | Nonsense | 8 | 138 | 1 | 2 |
ENSDART00000134648 | None | None | 164 | None | 2 |
ENSDART00000138876 | None | None | 57 | None | 1 |
Genomic Location (Zv9):
Chromosome 9 (position 57606795)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 56596617 |
GRCz11 | 9 | 55946279 |
KASP Assay ID:
1641-0506.1 (used for ordering genotyping assays)
KASP Sequence:
TGTGTTCATGTGTGYTYTCTCTCTCACAGGATGAGATTCTGACYGTCRTA[C/T]GAAGAGTRGACGATAACTGGGCAGAAGGCATGCTGGGAGATAAAATYGGG
Long Flanking Sequence:
TTGAACCTTTGCATTGTTTTGTTTGTTTAATCCTGTTTGCTGCCTGCCTCTGACCACTTGCCTATTGACCATGATTCTGGATTGCCTGTATACATCTGCGTGCCCCTGTGTTGGGCATTGCTGGCCTGACCTCGCTAATAACCCTGCATGTGGATCCGCATCTCTGTTGTCAGTGTCACTTCCCAGGTTACAGTTCTGCACAGAAATCTTCAAAATGAAGCTTGGTTTCTGTGAAATATTCCTTGACATCAGCCATGTGTAAACGACTCAAAAAGACTGTTTGTTTTACATATATTAAAAGGCTTTAGGAGATTGTACCTGAAATGATATTGTGGTGTTTTATTCATTTATTTCTGAATATGCAAATGAAGTGTGTTATACAGGTATCAGGGTTTTTAATCAGTAACTGTGAGTCTTTCTACAATGCCAGAATGAAGTGCTACATCTGCATGTGTTCATGTGTGTTTTCTCTCTCACAGGATGAGATTCTGACCGTCATA[C/T]GAAGAGTGGACGATAACTGGGCAGAAGGCATGCTGGGAGATAAAATCGGGATTTTTCCAATCTTATATGTGGAGGTGAGTGCCTGTAAATAAACTGCGATGGAGATTATGAACAATAACTAGCATGTACGTTTTCAGAAGAAAATGAGAGTCGTACTCGCCAAAACTCAGCACTGGGTTGATGCTAAGACATTGAGACATCAGACTGGTTGCTAGGTGGTTTCTAATGCTGCGTTCACACCAGACGCGGAACGCACGTCAAGAGTGAGTGATTTACATGTTAAGTCAATGCAAACACACAAATAGACATCCTGCGGCGCGATACACGTAAATGGTGCGGCGCGAATTATGCGAATTGCGCGAATGACGCAGTGCGAATTTTGTGCGAAGCTCTCGAGTTTGAAAATCTGAACTTCAGTGGACATTTGCGCCGCGTTAACCAATCAGGAGCTTGCTCTTGTGGGGGCGTTATTGTGACGTATCGCCGGGGATACGTCACAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa41560
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085042 | Essential Splice Site | 158 | 675 | 3 | 17 |
ENSDART00000133366 | None | None | 138 | None | 2 |
ENSDART00000134648 | None | None | 164 | None | 2 |
ENSDART00000138876 | None | None | 57 | None | 1 |
Genomic Location (Zv9):
Chromosome 9 (position 57589619)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 56579441 |
GRCz11 | 9 | 55929103 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTTGCGCCCCTGCCTCCAGCACAGCTGCTGCACAGGTACAGCACACATG[T/A]ATGTCTGCATCAAGCGGCAACCTCCTGGTCTCCCTTGGGTAGCCAATTCG
Long Flanking Sequence:
CGCAAAAAGGGGGTATGCAGTATATGCGGCGCATAGGGGCGCCACACATGGGGGGGGGGGCGCCATTGTGCCAAAACTATTTTTTAAATTACCCTTATTAAAAGTTTTAAATAATAAAAATAAATAAATATGTTTTGTTAAAAAAATTTATTTGGCATTTTATAAAAATATAACATTGTTATTGTTTAATTCAAAATCATTTAACACAATAACATGCAGTCCCACAGCCGAAAGTGTTCATGTAGATGTAACTGTTTAGATTTGTTTTATTTTTATCAAAATAAACTGTCAAATCATGCATAATGTCAAAAGTTATAAGGTTAATCTGAAAATTTGTCTTCATTTATTATTAATTTCCACTTAATTACTAATAATTAATTTAATTATTAGTTTGCCAAAATAAGAGGGATCCCACAAAATTTGAACCCGCATACCCCTCAGTAAATGTGTAGTTGCGCCCCTGCCTCCAGCACAGCTGCTGCACAGGTACAGCACACATG[T/A]ATGTCTGCATCAAGCGGCAACCTCCTGGTCTCCCTTGGGTAGCCAATTCGGAAGTAGCTAAAACTGCAATTCATCGACTCGCCTTTGGGGGGCTGGTGTAACGGAGGCCAGCCAAGTAGGTGCTGTGCAGGTAACCCTCACTCCTCTGACCTCTAAAGGTGCTCTAGTGACTGACGCTAGAGGCCATGGTCTTTAGCCTCCTTGTTAGAGCAACCGACTCCTATGCGGAAGGTCGCTGGTTCGATACCAGCTCGGAGCAGCTTCGGTGGCGTAGGACCAGCAGGGTTACGTTGGCTCCAGGAAATCCAACTGCAATGGTAAATTAGCCATTTTTACAGCTGATAAAAACATGTTTACAGCCTGATACAAAATATGGCTTTAGTGCATACAGCTAATATTACCCTTCATGACCCTAACCTGCCTGCCTAATTAACCTAGTGAAGCCTTTAAAGGGCAATGAGACCCCCTGTTTCAGCAGGGTGTTTTCACACCTCTAGTTT
Associated Phenotype:
Not determined