Busch Lab

ZMP

si:ch211-124n19.2

Ensembl ID:
ENSDARG00000060401
ZFIN ID:
ZDB-GENE-081104-105
Description:
Novel prptein similar to vertebrate SH3 domain containing ring finger 1 (SH3RF1) [Source:UniProtKB/T
Human Orthologue:
SH3RF3
Human Description:
SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:24699]
Mouse Orthologue:
Sh3rf3
Mouse Description:
SH3 domain containing ring finger 3 Gene [Source:MGI Symbol;Acc:MGI:2444637]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa14831 Nonsense Mutation detected in F1 DNA Not yet available
sa41560 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa14831
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085042 Nonsense 11 675 1 17
ENSDART00000133366 Nonsense 8 138 1 2
ENSDART00000134648 None None 164 None 2
ENSDART00000138876 None None 57 None 1
Genomic Location (Zv9):
Chromosome 9 (position 57606795)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 56596617
GRCz11 9 55946279
KASP Assay ID:
1641-0506.1 (used for ordering genotyping assays)
KASP Sequence:
TGTGTTCATGTGTGYTYTCTCTCTCACAGGATGAGATTCTGACYGTCRTA[C/T]GAAGAGTRGACGATAACTGGGCAGAAGGCATGCTGGGAGATAAAATYGGG
Long Flanking Sequence:
TTGAACCTTTGCATTGTTTTGTTTGTTTAATCCTGTTTGCTGCCTGCCTCTGACCACTTGCCTATTGACCATGATTCTGGATTGCCTGTATACATCTGCGTGCCCCTGTGTTGGGCATTGCTGGCCTGACCTCGCTAATAACCCTGCATGTGGATCCGCATCTCTGTTGTCAGTGTCACTTCCCAGGTTACAGTTCTGCACAGAAATCTTCAAAATGAAGCTTGGTTTCTGTGAAATATTCCTTGACATCAGCCATGTGTAAACGACTCAAAAAGACTGTTTGTTTTACATATATTAAAAGGCTTTAGGAGATTGTACCTGAAATGATATTGTGGTGTTTTATTCATTTATTTCTGAATATGCAAATGAAGTGTGTTATACAGGTATCAGGGTTTTTAATCAGTAACTGTGAGTCTTTCTACAATGCCAGAATGAAGTGCTACATCTGCATGTGTTCATGTGTGTTTTCTCTCTCACAGGATGAGATTCTGACCGTCATA[C/T]GAAGAGTGGACGATAACTGGGCAGAAGGCATGCTGGGAGATAAAATCGGGATTTTTCCAATCTTATATGTGGAGGTGAGTGCCTGTAAATAAACTGCGATGGAGATTATGAACAATAACTAGCATGTACGTTTTCAGAAGAAAATGAGAGTCGTACTCGCCAAAACTCAGCACTGGGTTGATGCTAAGACATTGAGACATCAGACTGGTTGCTAGGTGGTTTCTAATGCTGCGTTCACACCAGACGCGGAACGCACGTCAAGAGTGAGTGATTTACATGTTAAGTCAATGCAAACACACAAATAGACATCCTGCGGCGCGATACACGTAAATGGTGCGGCGCGAATTATGCGAATTGCGCGAATGACGCAGTGCGAATTTTGTGCGAAGCTCTCGAGTTTGAAAATCTGAACTTCAGTGGACATTTGCGCCGCGTTAACCAATCAGGAGCTTGCTCTTGTGGGGGCGTTATTGTGACGTATCGCCGGGGATACGTCACAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa41560
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085042 Essential Splice Site 158 675 3 17
ENSDART00000133366 None None 138 None 2
ENSDART00000134648 None None 164 None 2
ENSDART00000138876 None None 57 None 1
Genomic Location (Zv9):
Chromosome 9 (position 57589619)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 56579441
GRCz11 9 55929103
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTTGCGCCCCTGCCTCCAGCACAGCTGCTGCACAGGTACAGCACACATG[T/A]ATGTCTGCATCAAGCGGCAACCTCCTGGTCTCCCTTGGGTAGCCAATTCG
Long Flanking Sequence:
CGCAAAAAGGGGGTATGCAGTATATGCGGCGCATAGGGGCGCCACACATGGGGGGGGGGGCGCCATTGTGCCAAAACTATTTTTTAAATTACCCTTATTAAAAGTTTTAAATAATAAAAATAAATAAATATGTTTTGTTAAAAAAATTTATTTGGCATTTTATAAAAATATAACATTGTTATTGTTTAATTCAAAATCATTTAACACAATAACATGCAGTCCCACAGCCGAAAGTGTTCATGTAGATGTAACTGTTTAGATTTGTTTTATTTTTATCAAAATAAACTGTCAAATCATGCATAATGTCAAAAGTTATAAGGTTAATCTGAAAATTTGTCTTCATTTATTATTAATTTCCACTTAATTACTAATAATTAATTTAATTATTAGTTTGCCAAAATAAGAGGGATCCCACAAAATTTGAACCCGCATACCCCTCAGTAAATGTGTAGTTGCGCCCCTGCCTCCAGCACAGCTGCTGCACAGGTACAGCACACATG[T/A]ATGTCTGCATCAAGCGGCAACCTCCTGGTCTCCCTTGGGTAGCCAATTCGGAAGTAGCTAAAACTGCAATTCATCGACTCGCCTTTGGGGGGCTGGTGTAACGGAGGCCAGCCAAGTAGGTGCTGTGCAGGTAACCCTCACTCCTCTGACCTCTAAAGGTGCTCTAGTGACTGACGCTAGAGGCCATGGTCTTTAGCCTCCTTGTTAGAGCAACCGACTCCTATGCGGAAGGTCGCTGGTTCGATACCAGCTCGGAGCAGCTTCGGTGGCGTAGGACCAGCAGGGTTACGTTGGCTCCAGGAAATCCAACTGCAATGGTAAATTAGCCATTTTTACAGCTGATAAAAACATGTTTACAGCCTGATACAAAATATGGCTTTAGTGCATACAGCTAATATTACCCTTCATGACCCTAACCTGCCTGCCTAATTAACCTAGTGAAGCCTTTAAAGGGCAATGAGACCCCCTGTTTCAGCAGGGTGTTTTCACACCTCTAGTTT
Associated Phenotype:
Not determined