Busch Lab

ZMP

vangl1

Ensembl ID:
ENSDARG00000004305
ZFIN ID:
ZDB-GENE-040621-2
Description:
vang-like protein 1 [Source:RefSeq peptide;Acc:NP_991313]
Human Orthologue:
VANGL1
Human Description:
vang-like 1 (van gogh, Drosophila) [Source:HGNC Symbol;Acc:15512]
Mouse Orthologue:
Vangl1
Mouse Description:
vang-like 1 (van gogh, Drosophila) Gene [Source:MGI Symbol;Acc:MGI:2159344]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa15707 Nonsense Available for shipment Available now
sa13010 Nonsense Available for shipment Available now
sa16745 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa15707
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000036926 Nonsense 73 527 3 8
Genomic Location (Zv9):
Chromosome 9 (position 34075491)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 33231437
GRCz11 9 33042183
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTTTTATGCGTGTGATCTWAGCGACTGATCTCTCGACAGGATGAYAACT[G/A]GGGTGAAACCACCACGGCGGTCACTGGAACATCAGACCACAGCTTGTCTC
Long Flanking Sequence:
TCTCAGTTCTGATTAAATTGGCTAAACTACATTACCATACAAAACACAGTCTCTCCCCATAGAAATAAATCCATAAATAACCAGACGAATCCATAAATAAATATAGTTGCAGATGAATTATTGTTCTTACTGCGTATAATATTCCATAATGGAATTCTAATTTGCGCGGCATTTCACATTCCGACGGCGTTCGCTCAGACGTCTTACTGTTAAAACGTTTTCATTTGTTGTCAGTCAGCCTCTCAGTTCTCCGGCTCATTCATATGCAGATGTATGTGAGTTTTGAGTATTTGTCATTAATATATGCTGATGAGGGAGACCTGGGTACTTCCATACTGTCTGTCTGGATTAACAGATTTGTCATTTCATCAGCACCGAGGGAAACGTGGGCTGATCAATAGCTGAGTGCTGCGCTTGGGTTATGAATGGGGCTTTTAGGAGCATGTTGAATTTTTTATGCGTGTGATCTAAGCGACTGATCTCTCGACAGGATGACAACT[G/A]GGGTGAAACCACCACGGCGGTCACTGGAACATCAGACCACAGCTTGTCTCAAGAGGACCTGGCAGGCTTTGGGAAGGACACGGAGGGTCCAGTTGAGAAATTAAACTGTATACGCTTCCTTCCGTTGGCCCTGACCCTCCTCTTGGGTCTGCTGGTCCTGGTCACCCCTCTGTCCTTCCTGATTTTGCCACAGTTAATGTGGCCGGAGCGCCTGCAGACTTGCGGTACTGCATGTGAAGGCCTGTTTCTCTCACTGGCCTTCAAGCTCCTCATCCTGCTGCTGGCCGGCTGGGCTCTGTTTATGCGGCCGACAAGAGCTTCTCTGCCCAGGATAGCAGTGTTTCGTGCCCTGCTGGGTTTACTGACACTCCTCCTGCTGCTGTCCTATTGGCTGTTTTTTGGAGTGCGCATATTGGACTCACAGGTAAGGGCACATGTCTGAAAATAAAAAAAGTGGCAAGAGAAACATGTTCTTGATGAGATCTGCTAAATTGTAGATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13010
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000036926 Nonsense 140 527 3 8
Genomic Location (Zv9):
Chromosome 9 (position 34075692)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 33231638
GRCz11 9 33042384
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCTGGTCCTGGTCACCCCTYTGTCCTTCCTGRTTTTGCCACAGTTAATGT[G/A]GCCGGAGCGCCTGCAGACTTGCGGTACTGCATGTGAAGGCCTGTTYCTCT
Long Flanking Sequence:
TCTTACTGTTAAAACGTTTTCATTTGTTGTCAGTCAGCCTCTCAGTTCTCCGGCTCATTCATATGCAGATGTATGTGAGTTTTGAGTATTTGTCATTAATATATGCTGATGAGGGAGACCTGGGTACTTCCATACTGTCTGTCTGGATTAACAGATTTGTCATTTCATCAGCACCGAGGGAAACGTGGGCTGATCAATAGCTGAGTGCTGCGCTTGGGTTATGAATGGGGCTTTTAGGAGCATGTTGAATTTTTTATGCGTGTGATCTAAGCGACTGATCTCTCGACAGGATGACAACTGGGGTGAAACCACCACGGCGGTCACTGGAACATCAGACCACAGCTTGTCTCAAGAGGACCTGGCAGGCTTTGGGAAGGACACGGAGGGTCCAGTTGAGAAATTAAACTGTATACGCTTCCTTCCGTTGGCCCTGACCCTCCTCTTGGGTCTGCTGGTCCTGGTCACCCCTCTGTCCTTCCTGATTTTGCCACAGTTAATGT[G/A]GCCGGAGCGCCTGCAGACTTGCGGTACTGCATGTGAAGGCCTGTTTCTCTCACTGGCCTTCAAGCTCCTCATCCTGCTGCTGGCCGGCTGGGCTCTGTTTATGCGGCCGACAAGAGCTTCTCTGCCCAGGATAGCAGTGTTTCGTGCCCTGCTGGGTTTACTGACACTCCTCCTGCTGCTGTCCTATTGGCTGTTTTTTGGAGTGCGCATATTGGACTCACAGGTAAGGGCACATGTCTGAAAATAAAAAAAGTGGCAAGAGAAACATGTTCTTGATGAGATCTGCTAAATTGTAGATGTGCAAATTGTCTTTTATTAGAGTAGATACTCTAACATACACATGTGATTATTATTCTTTGTGATGCTGCACTTAAATTACACATCTAACAGTATAATTTACAAGAAGTTAAGAATATATATGTAATATGATGCTTACATCAGCATTCAAGGTTTAGGAGTTTTTGAAGTTCTTCTTATTAGTAGTAGAAACTTTTTTTATC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16745
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000036926 Essential Splice Site 214 527 3 8
Genomic Location (Zv9):
Chromosome 9 (position 34075917)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 33231863
GRCz11 9 33042609
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCTGYTGTCCTATTGGCTRTTTTTTGGAGYGCGCATATTGGACTCACAGG[T/C]AAGGGCACATGTCTGAAAATNAAAAAAGTGGCAAGAGAAACATGTTYTTG
Long Flanking Sequence:
TGGGGCTTTTAGGAGCATGTTGAATTTTTTATGCGTGTGATCTAAGCGACTGATCTCTCGACAGGATGACAACTGGGGTGAAACCACCACGGCGGTCACTGGAACATCAGACCACAGCTTGTCTCAAGAGGACCTGGCAGGCTTTGGGAAGGACACGGAGGGTCCAGTTGAGAAATTAAACTGTATACGCTTCCTTCCGTTGGCCCTGACCCTCCTCTTGGGTCTGCTGGTCCTGGTCACCCCTCTGTCCTTCCTGATTTTGCCACAGTTAATGTGGCCGGAGCGCCTGCAGACTTGCGGTACTGCATGTGAAGGCCTGTTTCTCTCACTGGCCTTCAAGCTCCTCATCCTGCTGCTGGCCGGCTGGGCTCTGTTTATGCGGCCGACAAGAGCTTCTCTGCCCAGGATAGCAGTGTTTCGTGCCCTGCTGGGTTTACTGACACTCCTCCTGCTGCTGTCCTATTGGCTGTTTTTTGGAGTGCGCATATTGGACTCACAGG[T/C]AAGGGCACATGTCTGAAAATAAAAAAAGTGGCAAGAGAAACATGTTCTTGATGAGATCTGCTAAATTGTAGATGTGCAAATTGTCTTTTATTAGAGTAGATACTCTAACATACACATGTGATTATTATTCTTTGTGATGCTGCACTTAAATTACACATCTAACAGTATAATTTACAAGAAGTTAAGAATATATATGTAATATGATGCTTACATCAGCATTCAAGGTTTAGGAGTTTTTGAAGTTCTTCTTATTAGTAGTAGAAACTTTTTTTATCTTCCATGAATTTTTCTTAAATTTGACATTTGAACGTGTAGGATTCAGATTTTTGATTATAAAAGTGCATGAGAGTTTAACTGCATTGAAGAATTTGAAATATTTCTGTAGAAACAAATGTAATAATACTATGTCCCGATCAGATTTTTTTGCCCTCAAGTCTGAGTCATTTGATTTTGAGTATCTACTAATACCAAAACCCGATCCGATACTTCTATAATCCATA
Associated Phenotype:
Not determined