ZMP
pabpc1l
Ensembl ID:
ZFIN ID:
Description:
polyadenylate-binding protein 1-like [Source:RefSeq peptide;Acc:NP_956133]
Human Orthologues:
PABPC1L, RBMS1, RBMS2, RBMS3
Human Descriptions:
RNA binding motif, single stranded interacting protein 1 [Source:HGNC Symbol;Acc:9907]
RNA binding motif, single stranded interacting protein 2 [Source:HGNC Symbol;Acc:9909]
RNA binding motif, single stranded interacting protein 3 [Source:HGNC Symbol;Acc:13427]
poly(A) binding protein, cytoplasmic 1-like [Source:HGNC Symbol;Acc:15797]
RNA binding motif, single stranded interacting protein 2 [Source:HGNC Symbol;Acc:9909]
RNA binding motif, single stranded interacting protein 3 [Source:HGNC Symbol;Acc:13427]
poly(A) binding protein, cytoplasmic 1-like [Source:HGNC Symbol;Acc:15797]
Mouse Orthologues:
Pabpc1l, Rbms1, Rbms2, Rbms3
Mouse Descriptions:
RNA binding motif, single stranded interacting protein 1 Gene [Source:MGI Symbol;Acc:MGI:1861774]
RNA binding motif, single stranded interacting protein 2 Gene [Source:MGI Symbol;Acc:MGI:1861776]
RNA binding motif, single stranded interacting protein Gene [Source:MGI Symbol;Acc:MGI:2444477]
poly(A) binding protein, cytoplasmic 1-like Gene [Source:MGI Symbol;Acc:MGI:1922908]
RNA binding motif, single stranded interacting protein 2 Gene [Source:MGI Symbol;Acc:MGI:1861776]
RNA binding motif, single stranded interacting protein Gene [Source:MGI Symbol;Acc:MGI:2444477]
poly(A) binding protein, cytoplasmic 1-like Gene [Source:MGI Symbol;Acc:MGI:1922908]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa16293 | Nonsense | Available for shipment | Available now |
| sa2423 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa16293
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000004546 | Nonsense | 167 | 620 | 4 | 15 |
| ENSDART00000126848 | Nonsense | 167 | 620 | 4 | 16 |
| ENSDART00000134161 | Nonsense | 167 | 557 | 4 | 13 |
| ENSDART00000142322 | None | None | 147 | None | 3 |
| ENSDART00000145011 | Nonsense | 167 | 557 | 4 | 13 |
Genomic Location (Zv9):
Chromosome 8 (position 47184177)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 45331036 |
| GRCz11 | 8 | 45338915 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAGCTAACAGAGCAATTGAGACGATGAATGGCATGCTTCTGAATGATCGC[A/T]AAGTGTACGTTTAATTAATGCAGTATGTGGTACAGAGTTYCTTTTAAACC
Long Flanking Sequence:
TAAGTGATCAGAAGGTTTCTCTAAAATCTGCACGTCACTTTTTCCTCTATTTAAGCGGAGTGTGCCCTTGACACAATGAACTATGAAGTCATTAAAGGTCGCCCAATCAGGATCATGTGGTCACAGCGAGATCCTGGTCTGAGAAAGTCTGGTGTGGGAAACATCTTCATCAAGAACATGGATGAGTCTATTGACAACAAGGCTCTTTATGACACCTTTTCTGCTTTTGGTAACATCTTGTCATGTAAGGTACATTCTTTTCCAGTCACTGTGCGATTTATCTATTGGATAGACGGGTTGACTTGAAGGCCTTTTTGCCTCAAGTTGAAATAAAATGTAATGTTTATTGCCACCAACGCATCTCAGAGTAACCTTTTTCTTCATTCTAGGTAGTTTGTGATGAAAACGGCTCAAAGGGTTATGGGTTTGTGCACTTTGAGACCCAAGAAGCAGCTAACAGAGCAATTGAGACGATGAATGGCATGCTTCTGAATGATCGC[A/T]AAGTGTACGTTTAATTAATGCAGTATGTGGTACAGAGTTCCTTTTAAACCCGCTGTATAAGTCAATTATTCTACTCGCGCTATGGTTACCACATAAAAATATCGTTCAGATTATGTATTTCAAGATATTTGTTAGGTTTTTGTTTTTAAATGACTTCTGTTTGTAGGACTAGATTCTTGCGTATTCATCCCAAGCCTTTGTGGCTAATTACAAAAGTTAAATCTTAAGCCATGGCGATGCAGTGGGTAGCACGTTCGCCTCACAGCAAGAAGGTCGCTGGGTCGCTGGTTCGAGCCTCGGCTCAGTTGGCGTTTCTGTGTGGAGTTTGCATGTTCTCCCTGCATTCATGTGGGTTTCCTCCGGGTGCTCCGGTTTCCCCCACAGTCCAAAGACATGCGGTACAAGTGAATTGGGTAGGTTAAATTTTCCGTAGTGTATGAGTGTGTGTGTGAATGAGTGTGTGAATGTTTCCCAGGAACGTGTTGCGGCTGGAAGGGCAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2423
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000004546 | Nonsense | 277 | 620 | 7 | 15 |
| ENSDART00000126848 | Nonsense | 277 | 620 | 7 | 16 |
| ENSDART00000134161 | Nonsense | 277 | 557 | 7 | 13 |
| ENSDART00000142322 | None | None | 147 | None | 3 |
| ENSDART00000145011 | Nonsense | 277 | 557 | 7 | 13 |
Genomic Location (Zv9):
Chromosome 8 (position 47181679)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 45333534 |
| GRCz11 | 8 | 45341413 |
KASP Assay ID:
554-2724.1 (used for ordering genotyping assays)
KASP Sequence:
TCCTGTATGTRGGCAGAGCTCAGAAAAGACTCGAGAGGCAGGGAGAGCTC[A/T]AGCGCAAGTTTGAGCAAATTAAGCAAGAGCGCATACAACGTTACCAGGTA
Long Flanking Sequence:
GTGTATATTAAGAACTTTGGTGAAGACATTGACAGTGAGAAACTGAAGAATATCTTCACTGAATTTGGTAAAAAAAATAAATAAATAAAATTTGATATATATATATATATATATATATATATATATATATATATATATAAAATGCAGTAACATTTTATTCCTGATTTTAATTTAATTCCTGTGATTCTTTATGAAAAATATACATACTTGAAGTTGTCTCTGATTCACAGGTAAAACTCTTAGCGTCTGTGTGATGACTGATGAAAGGGGACGCTCCCGTGGCTTTGGATTTGTCAATTTTGTCAACCATGGCGATGCTAGGAGGGTAAAAATGCAAATACAGATGTATCTTCATTATATGATAGTGACGGGTAAACAGAGATTTAACTTTTTTTTTCTCTTTGTGGTAGGCAGTAACTGAAATGAATGGCAAAGAGCTCAATGGCAGGGTCCTGTATGTAGGCAGAGCTCAGAAAAGACTCGAGAGGCAGGGAGAGCTC[A/T]AGCGCAAGTTTGAGCAAATTAAGCAAGAGCGCATACAACGTTACCAGGTACACTCATTTCTCTGCATTTTAATCAGCACAGGATGTATTCGACATCATCCTCATTATGTGAGATGGATTTGTATGTGGTTTTATCTGGAAACGTGTTGTGATGCACAAGTTGTTTCTTTAATTTTAGGGGGTTAATCTCTATGTGAAAAATCTGGATGACAGCATTGATGATGAGAAGTTGAGGAAGGAGTTTGCACCTTATGGAACCATCACCAGCGCAAAGGTAATATAAAAAAATACATGTGCCTTTTATAAAACAATGCTGTAGGTTTAACCAGTGAAACTAAAAGTGTTTTGCAGTGCTGAATAGTTTAATAAATAAGAATATCATTAGTGTGAGTACCACCAGTGTGTAACTATAAAGTCTGCAATCTCCATCATGGCTTGAGTTTATTACACATGAAGAGAGAAAATAAATCCCATGTAATGCTGTGTATGCTTTATATTAAC
Associated Phenotype:
Not determined