ZMP
lmod1
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to mouse tropomodulin 1 (Tmod1) [Source:UniProtKB/TrEMBL;Acc:B0S7F1]
Human Orthologue:
LMOD1
Human Description:
leiomodin 1 (smooth muscle) [Source:HGNC Symbol;Acc:6647]
Mouse Orthologue:
Lmod1
Mouse Description:
leiomodin 1 (smooth muscle) Gene [Source:MGI Symbol;Acc:MGI:2135671]
Alleles
There are 3 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa17930 | Nonsense | Available for shipment | Available now |
sa127 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa17930
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000078545 | Nonsense | 141 | 645 | 2 | 3 |
ENSDART00000131348 | Nonsense | 141 | 641 | 2 | 2 |
Genomic Location (Zv9):
Chromosome 8 (position 29155004)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 8 | 28282922 |
GRCz11 | 8 | 28302061 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGAAAAAGATAAGGAGAGAACGAGAAAATGGGAGGATGACTCTAAAGATT[T/A]ATCTGATGAGGGAAAGAATAAACGGGAGGAAAAGAGAAMAGGTGATAAGA
Long Flanking Sequence:
CCAGACCTGAATGTTCCTCCCTTTGCTGCCTTATAAGGGCACATCTGAGAGTTTTAAGACTTCTTCAAACAATAGCACACACATCTACACAGTACGTTCATTCCCTTTTAATGACCACCAAAAATAACTCACTCAGTTCAACTGGGTCCAGTCATGAAGACCTGTGTATTTAATGACAATCTTGATATTTATCTATAATTACACTAAAATGACAGCAAAAGTGAACTGAAATTAAATGTAAATACAATGTCAAAGATCAGACCTAGATTAGCCAAAATCAGATAAGCAAACTATCAAAAGACAAACAGTCAAGTACCTTTGTGAATAATGTGTCTGTTTGTAGGGAGGGGATGGAAGAAGGAGAGAGCGACTTCGCCGGATGAGGAGCAGAGAGTTTTCCAGATCACAGAGCGGCGATCCTCCGGACACAGAGAGCAGAAATGCTGAAAGTGAAAAAGATAAGGAGAGAACGAGAAAATGGGAGGATGACTCTAAAGATT[T/A]ATCTGATGAGGGAAAGAATAAACGGGAGGAAAAGAGAACAGGTGATAAGATGGAAAGTGGCAAAGAACTTTCTAGGAAAGAGAAAGGTGGCAGCAAAACTCTAGACCTCATCTCCAAACTGCAAGAGAAACAAGAGGAGAAGAAAGACAGAGGGAGGAAGGATGACAAGAAAGTGAACGAAAACTCCAAAATACGAGGGGTTGTCTCCAAACTTCAGGGGAATAAAGTGACTGAGGAAAAAAAGGACAAAAAGACGGACGTCAAACAGCAAGATGGAAGCAGAACTAAAGCTTCAGAGGTACCCAAAAACAACAAAGCAGGACGAGTAAACTTAATAGATGCAGAAAAAGACGACAAAAACAGCAGATTTAGTACAGTTGAAGAAACAAGTTTGGATAAAACCAGACCTCAAAAGGAGAGAGAACAAGTGAAAGCACCAGAAAACAGCAAGGCCAAGATTTTTACCAGTTCTTTCCATGAAAGCTCAGGGAACTGTCATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa127
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000078545 | Nonsense | 283 | 645 | 2 | 3 |
ENSDART00000131348 | Nonsense | 283 | 641 | 2 | 2 |
Genomic Location (Zv9):
Chromosome 8 (position 29154579)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 8 | 28282497 |
GRCz11 | 8 | 28301636 |
KASP Assay ID:
554-0180.1 (used for ordering genotyping assays)
KASP Sequence:
CAGTTGAAGAAACAAGTTTGGATAAAACCAGACCTCAAAAGGAGAGAGAA[C/T]AAGTGAAAGCACCAGAAAACAGCAAGGCCAAGATTTTTACCAGTTCTTTC
Long Flanking Sequence:
ACACAGAGAGCAGAAATGCTGAAAGTGAAAAAGATAAGGAGAGAACGAGAAAATGGGAGGATGACTCTAAAGATTTATCTGATGAGGGAAAGAATAAACGGGAGGAAAAGAGAACAGGTGATAAGATGGAAAGTGGCAAAGAACTTTCTAGGAAAGAGAAAGGTGGCAGCAAAACTCTAGACCTCATCTCCAAACTGCAAGAGAAACAAGAGGAGAAGAAAGACAGAGGGAGGAAGGATGACAAGAAAGTGAACGAAAACTCCAAAATACGAGGGGTTGTCTCCAAACTTCAGGGGAATAAAGTGACTGAGGAAAAAAAGGACAAAAAGACGGACGTCAAACAGCAAGATGGAAGCAGAACTAAAGCTTCAGAGGTACCCAAAAACAACAAAGCAGGACGAGTAAACTTAATAGATGCAGAAAAAGACGACAAAAACAGCAGATTTAGTACAGTTGAAGAAACAAGTTTGGATAAAACCAGACCTCAAAAGGAGAGAGAA[C/T]AAGTGAAAGCACCAGAAAACAGCAAGGCCAAGATTTTTACCAGTTCTTTCCATGAAAGCTCAGGGAACTGTCATGGAGCGGACACCTGTTCACTTACTACTGAGGAGGATGAGTCTTATAGTGAAGATCTGGACAGTGACACTGGCTCCAGCATGTTTGACGATCTTCTAGAGCAGGTTCGCAGTGACGATCCTGAACTAACTGAGGTCAACGTCAACAATTCAGATGCCATTAAAACAGATACCCTGATTCAGTTTGCAGAGGGTCTTCGCAGTAACACTCACATCAAAACCTTCTGCCTTGCAAACACAAGAGCGGATGATCATGTCGCATTCGCCATCGCTAAAACATTGCGAGAAAACTCAACCCTGACCGGCATCAACCTCGACTCTAATCATCTGACAGGCAAGGGCATCCTGGCCATCATCAACTCTCTTCAACACAACAGCGCACTGATGGAGCTGAGGTTTCATAACCAGAGACACATCTGCGGAGGGAAG
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |