Busch Lab

ZMP

lmod1

Ensembl ID:
ENSDARG00000056111
ZFIN ID:
ZDB-GENE-081104-348
Description:
Novel protein similar to mouse tropomodulin 1 (Tmod1) [Source:UniProtKB/TrEMBL;Acc:B0S7F1]
Human Orthologue:
LMOD1
Human Description:
leiomodin 1 (smooth muscle) [Source:HGNC Symbol;Acc:6647]
Mouse Orthologue:
Lmod1
Mouse Description:
leiomodin 1 (smooth muscle) Gene [Source:MGI Symbol;Acc:MGI:2135671]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa17930 Nonsense Available for shipment Available now
sa127 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa17930
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078545 Nonsense 141 645 2 3
ENSDART00000131348 Nonsense 141 641 2 2
Genomic Location (Zv9):
Chromosome 8 (position 29155004)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 28282922
GRCz11 8 28302061
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGAAAAAGATAAGGAGAGAACGAGAAAATGGGAGGATGACTCTAAAGATT[T/A]ATCTGATGAGGGAAAGAATAAACGGGAGGAAAAGAGAAMAGGTGATAAGA
Long Flanking Sequence:
CCAGACCTGAATGTTCCTCCCTTTGCTGCCTTATAAGGGCACATCTGAGAGTTTTAAGACTTCTTCAAACAATAGCACACACATCTACACAGTACGTTCATTCCCTTTTAATGACCACCAAAAATAACTCACTCAGTTCAACTGGGTCCAGTCATGAAGACCTGTGTATTTAATGACAATCTTGATATTTATCTATAATTACACTAAAATGACAGCAAAAGTGAACTGAAATTAAATGTAAATACAATGTCAAAGATCAGACCTAGATTAGCCAAAATCAGATAAGCAAACTATCAAAAGACAAACAGTCAAGTACCTTTGTGAATAATGTGTCTGTTTGTAGGGAGGGGATGGAAGAAGGAGAGAGCGACTTCGCCGGATGAGGAGCAGAGAGTTTTCCAGATCACAGAGCGGCGATCCTCCGGACACAGAGAGCAGAAATGCTGAAAGTGAAAAAGATAAGGAGAGAACGAGAAAATGGGAGGATGACTCTAAAGATT[T/A]ATCTGATGAGGGAAAGAATAAACGGGAGGAAAAGAGAACAGGTGATAAGATGGAAAGTGGCAAAGAACTTTCTAGGAAAGAGAAAGGTGGCAGCAAAACTCTAGACCTCATCTCCAAACTGCAAGAGAAACAAGAGGAGAAGAAAGACAGAGGGAGGAAGGATGACAAGAAAGTGAACGAAAACTCCAAAATACGAGGGGTTGTCTCCAAACTTCAGGGGAATAAAGTGACTGAGGAAAAAAAGGACAAAAAGACGGACGTCAAACAGCAAGATGGAAGCAGAACTAAAGCTTCAGAGGTACCCAAAAACAACAAAGCAGGACGAGTAAACTTAATAGATGCAGAAAAAGACGACAAAAACAGCAGATTTAGTACAGTTGAAGAAACAAGTTTGGATAAAACCAGACCTCAAAAGGAGAGAGAACAAGTGAAAGCACCAGAAAACAGCAAGGCCAAGATTTTTACCAGTTCTTTCCATGAAAGCTCAGGGAACTGTCATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa127
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078545 Nonsense 283 645 2 3
ENSDART00000131348 Nonsense 283 641 2 2
Genomic Location (Zv9):
Chromosome 8 (position 29154579)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 28282497
GRCz11 8 28301636
KASP Assay ID:
554-0180.1 (used for ordering genotyping assays)
KASP Sequence:
CAGTTGAAGAAACAAGTTTGGATAAAACCAGACCTCAAAAGGAGAGAGAA[C/T]AAGTGAAAGCACCAGAAAACAGCAAGGCCAAGATTTTTACCAGTTCTTTC
Long Flanking Sequence:
ACACAGAGAGCAGAAATGCTGAAAGTGAAAAAGATAAGGAGAGAACGAGAAAATGGGAGGATGACTCTAAAGATTTATCTGATGAGGGAAAGAATAAACGGGAGGAAAAGAGAACAGGTGATAAGATGGAAAGTGGCAAAGAACTTTCTAGGAAAGAGAAAGGTGGCAGCAAAACTCTAGACCTCATCTCCAAACTGCAAGAGAAACAAGAGGAGAAGAAAGACAGAGGGAGGAAGGATGACAAGAAAGTGAACGAAAACTCCAAAATACGAGGGGTTGTCTCCAAACTTCAGGGGAATAAAGTGACTGAGGAAAAAAAGGACAAAAAGACGGACGTCAAACAGCAAGATGGAAGCAGAACTAAAGCTTCAGAGGTACCCAAAAACAACAAAGCAGGACGAGTAAACTTAATAGATGCAGAAAAAGACGACAAAAACAGCAGATTTAGTACAGTTGAAGAAACAAGTTTGGATAAAACCAGACCTCAAAAGGAGAGAGAA[C/T]AAGTGAAAGCACCAGAAAACAGCAAGGCCAAGATTTTTACCAGTTCTTTCCATGAAAGCTCAGGGAACTGTCATGGAGCGGACACCTGTTCACTTACTACTGAGGAGGATGAGTCTTATAGTGAAGATCTGGACAGTGACACTGGCTCCAGCATGTTTGACGATCTTCTAGAGCAGGTTCGCAGTGACGATCCTGAACTAACTGAGGTCAACGTCAACAATTCAGATGCCATTAAAACAGATACCCTGATTCAGTTTGCAGAGGGTCTTCGCAGTAACACTCACATCAAAACCTTCTGCCTTGCAAACACAAGAGCGGATGATCATGTCGCATTCGCCATCGCTAAAACATTGCGAGAAAACTCAACCCTGACCGGCATCAACCTCGACTCTAATCATCTGACAGGCAAGGGCATCCTGGCCATCATCAACTCTCTTCAACACAACAGCGCACTGATGGAGCTGAGGTTTCATAACCAGAGACACATCTGCGGAGGGAAG
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037
whole organism
ZFA:0001094
quality
PATO:0000001
normal
PATO:0000461