ZMP
ythdf1
Ensembl ID:
ZFIN ID:
Description:
YTH domain family protein 1 [Source:RefSeq peptide;Acc:NP_997878]
Human Orthologue:
YTHDF1
Human Description:
YTH domain family, member 1 [Source:HGNC Symbol;Acc:15867]
Mouse Orthologue:
Ythdf1
Mouse Description:
YTH domain family 1 Gene [Source:MGI Symbol;Acc:MGI:1917431]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa13414 | Nonsense | Available for shipment | Available now |
sa41192 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa13414
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000025171 | Nonsense | 309 | 614 | 4 | 6 |
The following transcripts of ENSDARG00000016447 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 8 (position 23962681)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 8 | 23088499 |
GRCz11 | 8 | 23109738 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CATCATTGCCACCYMACCACCACCACCAGCAGCAGCCTCMCCTCCACTCC[C/T]AGGGTCACCTTCCACCTCACCCTCATGGACTGCCACCCCCACCTCAGCCC
Long Flanking Sequence:
CTCAGAGTTCTGCATATGGGGGCAGCTACAGTTACCCGCCCAGTTCTTTAGGTGGAACCCTGGTGCCAGACGGGCAAACAGGCTTCCCTAGTGACACCCTGAATAAGGCACCAGGTATGAATAGCTTGGAGCAGGGCATGGTGGGGCTGAAGATCGGTGGTGATGTGACTGGAGGTGGTTCCGGAGTTAAGACGGTGGGCTCCGTGATTGGAGGAGGGCCGGTGGCTGCGGCGGTGGCCACGGGTAATGGTGGGACTCCTATTGGACTGCCGCCCCCTAAGCCCACATCTTGGGCAGCCATTGCTAGCAAACCGGCCAAGCCTCAGCAACTGAAGGTGAAGAGTAAGCCAGGGATGCCCATGGCTGGAGGCACCCTGCCTCCGCCGCCCATCAAACACAACATGGACATTGGCACTTGGGATAATAAGGGGCCTGTGACCAAAGTGGCATCATCATTGCCACCTCACCACCACCACCAGCAGCAGCCTCCCCTCCACTCC[C/T]AGGGTCACCTTCCACCTCACCCTCATGGACTGCCACCCCCACCTCAGCCCCCAATGCCGTCTGCACAATCACTTGCCCAGCAGATGGCCATGCAGGGCCCACCCCCTCCGCAGCCTTACCAGAACCACGCCCCTGCTCCTCCCCCGCAAACTCGGTGGGTTGCCCCACGCAATCGCAACCCTGGTTATGGTGGTGGAGGAAGCGTGGACAGCAGTGGCTCCTCGAGTGGTGGAGGGGTCGGCAATGGAGGCGGAGGTGGCCCACCGGGCTCCGGCGCCATCGAGTCCCATCCCGTCTTAGAAAAGCTGCGTGCGGCACACAGCTACAACCCCAAGGAGTTCGATTGGAACCTGAAAAATGGCCGGGTGTTCATCATTAAGAGCTACTCTGAGGACGACATCCATCGCTCCATCAAGTACTCCATCTGGTGCAGCACGGAACATGGAAACAAGCGGCTGGATTCTGCGTTTCGTGCCATCAACGGCAAAGGTCCTGTCTAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa41192
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000025171 | Nonsense | 540 | 614 | 4 | 6 |
The following transcripts of ENSDARG00000016447 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 8 (position 23963374)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 8 | 23089192 |
GRCz11 | 8 | 23110431 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACGTGCCCAACAGTCAGCTCAGGCACATCCGCCTGGAGAACAATGACAAC[A/T]AGCCCGTGACCAACTCGCGTGACACACAGGAGGTGCCTCTGGAAAAGGCC
Long Flanking Sequence:
GTGGAGGAAGCGTGGACAGCAGTGGCTCCTCGAGTGGTGGAGGGGTCGGCAATGGAGGCGGAGGTGGCCCACCGGGCTCCGGCGCCATCGAGTCCCATCCCGTCTTAGAAAAGCTGCGTGCGGCACACAGCTACAACCCCAAGGAGTTCGATTGGAACCTGAAAAATGGCCGGGTGTTCATCATTAAGAGCTACTCTGAGGACGACATCCATCGCTCCATCAAGTACTCCATCTGGTGCAGCACGGAACATGGAAACAAGCGGCTGGATTCTGCGTTTCGTGCCATCAACGGCAAAGGTCCTGTCTACCTGCTGTTCAGCGTCAACGGCAGCGGACACTTCTGTGGCGTGGCGGAGATGCGTTCGCCTGTTGACTACGGCACCAGTGCCGGTGTTTGGGCGCAGGACAAGTGGAAGGGCAAATTTGATGTGGACTGGCTGTTTGTTAAAGACGTGCCCAACAGTCAGCTCAGGCACATCCGCCTGGAGAACAATGACAAC[A/T]AGCCCGTGACCAACTCGCGTGACACACAGGAGGTGCCTCTGGAAAAGGCCAAGCAGGTGCTGAAGATCATCGCTACCTACAAACACACAACCTCCATCTTCGATGACTTCTCACATTACGAGAAACGGCAGGAGGAGGAAGAGGTGGTAAGAAAGGTATTTTGCATGCAACGGTCTGTTCTGCTGATCTTCATTGCATTGTTGAAGCTTATGTGAAATCAACATTAACAATGTTTGTTTTGCTAGCATACATTATTATGCTTTATGTGAACAGTTAATCCGTGCAAGTTCATCTTCAAAGTCTGACCATTTGCTTCTGTCTTTGGACTAGCAGTCCTACACTGTTAGGATCACTCTTTACTAGGGCTGGGCGAAAAATTGATTTTATGAATTAACTTGAATGTGCAGTTTACATCGAGTTGTTGAAATGAAATCAGTTATCACTCTAGCTCATTCAACCCTCTCCTTTGGGTTTTCAGAGTTCCCCGTCAGTTTGCCATA
Associated Phenotype:
Not determined