ZMP
si:ch73-250d21.2
Ensembl ID:
ZFIN ID:
Description:
solute carrier family 6 (neurotransmitter transporter, taurine), member 6 [Source:RefSeq peptide;Ac
Human Orthologue:
SLC6A6
Human Description:
solute carrier family 6 (neurotransmitter transporter, taurine), member 6 [Source:HGNC Symbol;Acc:11
Mouse Orthologue:
Slc6a6
Mouse Description:
solute carrier family 6 (neurotransmitter transporter, taurine), member 6 Gene [Source:MGI Symbol;Ac
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa21191 | Essential Splice Site | Available for shipment | Available now |
| sa41116 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa13500 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa21191
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000041794 | Essential Splice Site | 77 | 625 | 2 | 13 |
| ENSDART00000146306 | Essential Splice Site | 77 | 625 | 3 | 14 |
Genomic Location (Zv9):
Chromosome 8 (position 7732940)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 7119743 |
| GRCz11 | 8 | 7163291 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTGTAATGTCTGTATTAAGTGAAACTCATCTTACGTGTTGTTCTTTTCA[G/A]GTGCATTTCTCATCCCCTACTTCATCTTTCTGTTTGGTGGTGGTTTGCCT
Long Flanking Sequence:
GTGGCTGGAAGGGCATCCGCTGCGTAAAAACTTGCTGGATAAGTTGGCGGTTCATTCCGCTGTGGTGACCCCGGATTAATAAAGGGACTAAGCCGACAAGAAAATGAATGAATGAATGAAAGCAGAGATCAACATCCCATAATGCAATTGGTGGGCAGGTGAATCTGTGCTTTTGAAAACACTATTGGTTGGGTTTAGGGAAGGAGGAGGGTGGTTCAGTCGATGGGTCAGTCATTCAGTCAGTCAGTCGACAGTGGCCTCTGGTAAATTTACACGAGAGCTGCAGGCCCGAATGGCACTCAAGAGAGTTATTTGAGATCTCAAAAACCATACACAGCGACCTCTGGGGGATTCGGGAAATAAAAACTGCAAAAAACGTACCTCCTGGGTCCCTCTTATTTGTCGCTCTTCAGAAATGTATATAGCGGTATGTTTTCAGAGTGTTTTGGTTGTGTAATGTCTGTATTAAGTGAAACTCATCTTACGTGTTGTTCTTTTCA[G/A]GTGCATTTCTCATCCCCTACTTCATCTTTCTGTTTGGTGGTGGTTTGCCTGTCTTCTTTTTGGAGGTGGCGCTCGGTCAGTTCACCTCTGAGGGAGGAATAACCTGCTGGGGGAAACTCTGCCCGATATTCACTGGTGAGAGCACTGAGACAACACAAATTGAGAGAACATGAGACAGATCTGACTGACTATTAACACAAAACACTGCAGGTGTATAGGGTACAACAACTAACTACACTGTCAAAAATATCATCGAGTGTATTTTGTGATTCACACGTGTTTTAGTTTATTTACAGCTGTGAATTGCATTATGGGATGTTGATCTCTGCTCTGTCGACTTTTGATGTTAAAAATTCACTCTACAGTTTAACAAAGTGACTTTTATTAATACTTTAGTATAGTATGATATAATATAATGTATAAGAAATAATATATAGAGAAATAAGTCTGTCAAAGGACAGAAATTGTACTGGCACTTTATTACAAGGTTTTTGTACCAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa41116
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000041794 | Essential Splice Site | 324 | 625 | 6 | 13 |
| ENSDART00000146306 | Essential Splice Site | 324 | 625 | 7 | 14 |
Genomic Location (Zv9):
Chromosome 8 (position 7746388)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 7133191 |
| GRCz11 | 8 | 7176739 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCAATGACTTCACTGGGAAGCTACAACAAGTACAAGTACAACTGTTACAG[G/A]TGAGGGTATGCTGTTGTGTATTTGTTTATGTTTTGTATCCACTGTTTATT
Long Flanking Sequence:
GAGCTAGGCTATTTAGAGGCTTCTAGGTAAGAAGCAATATTTTAGAATCAATACGGAACTTTAAAGGCAGGCAGTGCAAGGAAGATAAAATTGTAATGATCATATTTTCTTGACCTGCTAAGAACTCTGGCAGATGCAATTTGCACTAACTGAATTTTTTTAATAAAGGATGCATTACAACCAGATAAAAGAGCATTACAGCAATCCAGCCTAGTGGTCATAAAACATGAACTAGCTCTTCTAAAACTGAGATAAATAGCATGTTTCTTAGCTTAGCAATATTTCTGAGATGAGAGAAGGCTATTTTTGTATAACGTGATACCACAATCTGCATTGCTATTTTTCATTTAATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGAATGGATGTAGGTTTGGATCGATGCAGGCACTCAGATCTTTTTCTCATATGCTATTTGTCTTGGTGCAATGACTTCACTGGGAAGCTACAACAAGTACAAGTACAACTGTTACAG[G/A]TGAGGGTATGCTGTTGTGTATTTGTTTATGTTTTGTATCCACTGTTTATTTTGTTTAAGGTGTCAACATTGTTTGTTTGTGTGTGTTTAGGGACTGCATGCTGCTCGGGTGCCTGAACAGCGGTACCAGTTTCGTGTCAGGCTTTGCCATCTTCTCAGTCCTGGGGTTCATGGCACAGGAGCAGGGCATAGCCATCGCTGACGTGGCCGAGTCAGGTGACCTTAGGGTTCAGGGTTTTCAATGTGAATGCATGAAATTCTGGGAATGAAAGGGGAAAAGTTGTCATAGGTGTTAATTGAATATAAAAAAATATATTATTTAATTATTTGGAAGTAATAATGTAGTGCATATTATGAGAAAGGTAATTCAGTTCAGTTAACTTATGTATGAAGTAAAAAAAAAAACAGAAAGGTGTGCTAAAGTATTAATGTAAACTACCTATAAAGATCATTTATACATTTTAATGCATGTAAATGATATAATAAAATGTCAGAAATAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13500
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000041794 | Nonsense | 527 | 625 | 12 | 13 |
| ENSDART00000146306 | Nonsense | 527 | 625 | 13 | 14 |
Genomic Location (Zv9):
Chromosome 8 (position 7762582)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 8 | 7149385 |
| GRCz11 | 8 | 7192933 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CACCTCACCTTTCTCTTTCAGGGTTGTTTTGTCTTTTCATTGGTGAAATA[C/A]AAGCCRCTGACTTATAACAAGCTTTACAAGTATCCTGATTGGTCCATTGG
Long Flanking Sequence:
AAAACACAACTATTTTATAACAGCAGTTTGCTCTGTAGACAATTGAAAAATTATTCCTTAGGGGGGCTAGTAGTATTGAACTTAATATGTGTTTAAGAAATGAAAAACTGCTTTTACTTTAGCCGAAATAAAACATATAAGACTTTCTCCAGGAGAAAAAAATATTATAGGAAATACTGTGAAAAATTTCTTGCTCTTTTAAACATAATATGGGAAATATTTGAAGAAAAAAAAAACACTCACAGGAGCGCTGATCATTTTGACTTTAACTGTATGTGTGCATTTTTAGGGGCTGATAATTTCTACGATGCTATAGAGGACATGATCGGCTACAGACCCAACAGCTGGATGAAATGGAGCTGGATGCTGATCACCCCCGTCCTTTGTGTGGTAAGTATGTGTGTGTGCTTGAGAAATTAACCAGCCTGTGTGTCAACCATATAAGGAGATCACCTCACCTTTCTCTTTCAGGGTTGTTTTGTCTTTTCATTGGTGAAATA[C/A]AAGCCGCTGACTTATAACAAGCTTTACAAGTATCCTGATTGGTCCATTGGCTTGGGTTGGGCTCTTGCTCTGGCTTCAATGATTTGCATCCCGATGATGGTCGTCATCAAAATCATCCAATCAGATGGCTCCCTGATTGAGGTGAGAAGGAGATACATTGCAGATAAAACATAACAGGTTGTTTTGATATATAATGTCATGATAGTTATAAATGAAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACAGTTGAAGTCAGAATTATTAGCCCCCCTGATTTATTAACGCCCCTGTTTATTTTTTTCCCCAATTTCTGTTCTGTTCTGGGAAGATTGTTTCAGCACATTTCTAAACATAATAGTTTTAAAAACTTATTTCTAATAACTGATTTATTTTATCTTTTCCATGAC
Associated Phenotype:
Not determined