Busch Lab

ZMP

LOC567602

Ensembl ID:
ENSDARG00000035796
Human Orthologues:
CDH1, CDH3
Human Descriptions:
cadherin 1, type 1, E-cadherin (epithelial) [Source:HGNC Symbol;Acc:1748]
cadherin 3, type 1, P-cadherin (placental) [Source:HGNC Symbol;Acc:1762]
Mouse Orthologues:
Cdh1, Cdh3
Mouse Descriptions:
cadherin 1 Gene [Source:MGI Symbol;Acc:MGI:88354]
cadherin 3 Gene [Source:MGI Symbol;Acc:MGI:88356]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa16568 Nonsense Available for shipment Available now
sa41033 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa16568
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000002834 Nonsense 179 746 4 13
Genomic Location (Zv9):
Chromosome 7 (position 56394303)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 54880386
GRCz11 7 55181797
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGATACTTTTWAYGCTGATGTCAGATACAAAATTGTYAGCCAAGAWCCAK[T/A]ATTACCAAATCCAAACATGTTTGAAATYAACTTGGTTACTGGAGGAATTT
Long Flanking Sequence:
AAAATGGCACATTCAGAAAAACCATAATATTAATATTAAATCTTAAACAAGGGGGAAAATAGGGGCCCTTTAAGTTTGTATTTAAATGTTTACACTTAATTGTTTAATAGAGTATTTTACTATATGTTTTACTGGAATTGTGGAATGCTTCACTTTATATCCATGTTGCATCTTGTGTTTTCAGCTCATGGCTCATGCTAATTCAGTTAAAGGAATAAAAGAGAAACCGACCAACCTTACTATCATTGTAGCTGACCAGAACGATAATAGGCCTGTGTTTGTTGAAAATCCTTTTAATGGACACGTTTCTGAATCTGCTACAATAGGTAAGTAAACAGACCAATAGAACAATATTATACATTTCAATGATCCCTCATGATGTTGTTTTTATTCTTCTCTCACTAAAGGTCATGAGTTTATGGCAGTCACAGCCACTGATGCTGATGACCCAGATACTTTTAACGCTGATGTCAGATACAAAATTGTTAGCCAAGATCCAT[T/A]ATTACCAAATCCAAACATGTTTGAAATCAACTTGGTTACTGGAGGAATTTATGTAAAATTCTTAGGTCTAGACAGAGAGGTGAGGACTCGGATTAAATTACTTTACAGTTGTATAGAATGATTTCATGTAATCACTCTCACCTAACAATGCCTTACCTTTCAGCAATTGTCCAGATATACTTTGGTAATTCAAGCTGCAGATCTTCAAGGAGATGGTATGATGACCACTGGCACAGCAGTTATTACTGTTACTGACAGCAATGATAACGCACCTCAGTTTGACGAAACCACGGTATTGCATACATTATAAACGTTTAAAATCTGACTAATTTTATTGAAGATATCATATTTTTATTGAGTAATTTTTTCTGTATAAATACTTAATTTTATGTTTTAGCACATCGTATCTGTCTCAGAGAATCAAGTAGCGGCTATAGTGGCCAAACTTCCAGTTATTGATGCAGATGAACTTGGATCACCAGCCTGGTCCACCAAGTATC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa41033
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000002834 Nonsense 394 746 8 13
Genomic Location (Zv9):
Chromosome 7 (position 56388627)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 54886062
GRCz11 7 55187473
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAATAATTGCTTCACAAAAATTATATTTTTTACTGTTTGGTTCCAGGTAT[A/T]AAATTAGCAATGATCCTGCTGGCTGGCTAACTGTGAATCGGGAGACTGGA
Long Flanking Sequence:
ATGATGCATCACTCATTTTAATAAAATCATCTGCTAAATGACTAATTGTAAATTTAAATTGCCTATTCTGATGCACGGTTTGAACTTCAGCAGGTTGGCTTAAATATGTCTACATGCCAGAATGCATAGGGTTGGTGCTATGTTATTGCATGATTATATATTTTCATTAAGCTGTTGAACAGTTGTACCTGGTGGGTGTATTTTTATTAGAATTCATTTTTAAGTATTTTAATTGAGTTCTGTGATCGCAAATATCAATTTCCAGTAACAATTTGTTGATAATGGAGCTCTAATTGTAATTAAGATAAATTTAGACAACAAATTAGCATATGAGAATGATCACTTGTGACTCTGAAGACTAGAGTAGTAATTGCTGAAAACAACTGGATTCCCATCACTGAAGTAAATTTCATTTTATAACATGTTCAAATAGAATACAGGTCTATAATTAAATAATTGCTTCACAAAAATTATATTTTTTACTGTTTGGTTCCAGGTAT[A/T]AAATTAGCAATGATCCTGCTGGCTGGCTAACTGTGAATCGGGAGACTGGACTGATTAAAATTAGAAACTCTATGGATAGAGAGTCTTCCTATGTCAGAGATGGCAAATACAGAACTACTATTTTGGCCCTGGATAATGATGGTAATATCTGTTTATTTTAAGAAAAATTATTCTTGTTAGCATAACCCTAAATAATGTTGATTGAAGTTTGTACATTTATGCAGATGACAATCCAGCAACTGGTACAGGAACCCTGGTAATTAAAGTGGAGGATGTAAATGACAATGCTCCTGTTATTAATGAAGAACATATACAAATTTGCAATCGGGAGGCCACAGTCCTTCTCTCTATAACGGACACAGATGGACCTCCTTATGCTGCTCCTTTTAGCATTAGCCTCCTAGGAGACACCAAGAAAAACTGGACTGCGGAAATGAACGAAAACAGTAAGCAGTTATTAACAGGGTTTGAAATAAATACTTATTATATATATATATATA
Associated Phenotype:
Not determined