ZMP
cgnl1
Ensembl ID:
ZFIN ID:
Description:
Cgnl1 protein [Source:UniProtKB/TrEMBL;Acc:Q58ED4]
Human Orthologue:
CGNL1
Human Description:
cingulin-like 1 [Source:HGNC Symbol;Acc:25931]
Mouse Orthologue:
Cgnl1
Mouse Description:
cingulin-like 1 Gene [Source:MGI Symbol;Acc:MGI:1915428]
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa21073 | Nonsense | Available for shipment | Available now |
sa11664 | Nonsense | Available for shipment | Available now |
sa15287 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa21073
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000052039 | None | None | 486 | None | 11 |
ENSDART00000129769 | Nonsense | 208 | 1214 | 2 | 19 |
Genomic Location (Zv9):
Chromosome 7 (position 53948639)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 52218489 |
GRCz11 | 7 | 52493559 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AACGCCTTCCAGTTCCTCAGCCATCTACAGTAGCCAGCAAGCCCAGTGAC[C/T]AGACCAGGGCTTTGTCTAGACCTCCTAGCTCAGTGAGTAGTGCCAACTCC
Long Flanking Sequence:
TGGATTTTTTGTCACAGAAGGTCTATGGAGGTCCTCACAATGGAAGTTCAGATCCTAAGAAGCAATCTAGTCTTTTGAACTTCCAAAAGCATCCAGAACTTCTCAAGCCATATGATCCTGAAAGCAATACGCTTGACAGCTTTCAAAGTTTACCTGAAGTTGAAATTCAAAATCCCTACCTGGTACCCCAACCCACAACCAATTCCCCAGTTGCTAGCCAAGCCAGATCCTCCAGCCTAGTTCCAGAACCATTTTTAACAGATAACATGGGACATGCCCAACCTCAAGTTCGTCCCCAGACACTGCCGTTCGACAGCCGTCCACAAAGAGGTCCGACCAAAGACCAAGTTCAGACCCAGCCTCAGGTCAAACCCCAGGTTCAACCACAGTCTCAGGTCAAGGCACCTTTCAAGAATCCAGTGCCCTACCAGACTCAGTCACAGCCCTCAAAACGCCTTCCAGTTCCTCAGCCATCTACAGTAGCCAGCAAGCCCAGTGAC[C/T]AGACCAGGGCTTTGTCTAGACCTCCTAGCTCAGTGAGTAGTGCCAACTCCAGTCTGGAACGAAGCCGTCGTGAGCCGGATGTGCTGCCCTTACGCCGATTTGACTCCAGTGGCCCTGTGCTACAGACTTCTTCCTCCAGAAACTCCTCTGTGGGCTCCACCACACCAACCAAGGAAGACCAGTTGGAGCAGCTTTATTCAGAGAGTATCAACCGTCATGAGAATCGGCGCTACATACCCTTTCTGCCTGGCACAGGTCGGGACATTGATACTGGTTCCATCCCAGGTGTGGATGAGCTTATAAAGAAGTTTGACAGCAAAGAGACTCAGCAGCGCAGGGGACGGTCAGGGCGGAGGAATCGACTGAATCCAGAAGACCGCAAGCGTTCCCGTAGTGTCGACAGTGCCTTGCCATTCAGTCTTGGGGGCGACTCTGACTACTTGGATGAAGTTTCCCGAAATAGAGGCAGGTCTACAGAGCATCTCCTTCGCCCATCACTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11664
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000052039 | Nonsense | 162 | 486 | 5 | 11 |
ENSDART00000129769 | Nonsense | 609 | 1214 | 6 | 19 |
Genomic Location (Zv9):
Chromosome 7 (position 53943444)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 52213294 |
GRCz11 | 7 | 52488364 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CGGGAGCTGGAGTRAAAGACTTGAGGAGAGAGCTGGAGCAGAGTCAAGCY[G/T]AGTGCAGTAGACTGAGGGAMAAGCTGAKTAAAACAGAGGCTGACCTGCGC
Long Flanking Sequence:
AGAACTGGAAAAAGAAATCGCTGATCTTAAGAAACAGCTTGAGAATGAGAGCAAGGTATCTCTCTCTCTCTCTCTTTTTCTCTTTCTCACTCTCTATCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCCCTCCCTCTCTCCCCCCCTCTCTAATAATACCTGTACTGCTTTAACTTGTCAACTGTACCTTGGACCCCTGCTCTGTCTGTGTAGTCAGTCGATTACAAGCTTCCACATTGACCGAAAATCCCACTCCTATCACCCTTTAAGTTCAATAATCAAATTAACCAATTACTTGGGCCTTAGATCCAAAAAAAGACTCCCTGTGTCTCAGACAGACAATTATTTGAAAGGTTTAGTAAGGTTACTGTCAATTCATGTCCTCACTGTCGTTTCTGATTACGTCCCGCCGGCAGAAGCGCAGTGATCTGAGTGAGATGCAGATGAAGGCGGGAGCTGGAGTAAAAGACTTGAGGAGAGAGCTGGAGCAGAGTCAAGCC[G/T]AGTGCAGTAGACTGAGGGACAAGCTGAGTAAAACAGAGGCTGACCTGCGCACTACAGTGGACGAGTAAGACGCTGATTCACACAGAATATGAACACTATATGAAATCATTTTCAAATTTGTCAATAAAACGGTAATGATTGAAGTAGAGCTGCAACTAACAATTATATTAATAATCAATTAATCTGTTGATTATTTTTTTCGATGAATCGATGAATTGGAATTTAAAAAAAAGAAAAGCAATGATTTCTGACCCTTTATTCAAAAACAGATCTAAAATCTTGGTAACGTGCACACAAATGTTGTCCTTAAGCCTCCCTGAGCCGTTATAATAATAATAATAATAGTAAAGTAAAAAAAAATACTTAGTAGTTTTGTCCTGTTTTTAATGGTTTAAATGCCATTTTTCTTGTTTAGCCTTGATTAAACTTATATTTGGACTGGAAACAAGACGAAATTAATAATAAGAATATTCACTCGCTAGCTCATCATGTCATCAGCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15287
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000052039 | Nonsense | 318 | 486 | 8 | 11 |
ENSDART00000129769 | Nonsense | 775 | 1214 | 10 | 19 |
Genomic Location (Zv9):
Chromosome 7 (position 53917847)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 52187697 |
GRCz11 | 7 | 52462767 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGAACCATGTTACAGCCAATAAGGAGAAAGAGGAAGTGGAAGCAGCACGA[A/T]AGGTTTCTGAGAGCCAGACAAGCCGTCTGTCTCAGGAGATTGARAGACTG
Long Flanking Sequence:
AAGGTCGCTGGTTCGAGTCCTGGCTGGGCCAGTTGGCATTTCTGTGTGGAGTTTGCATGTTCTCCCCATGTTGGTGTGGGTTTCCTCCATGTGCTCCAGTTTCCTCCACAAGCTCAAATACATATGCTATAGGTGAATTGAATAAACTAAATTGGGTGTAGTGTGAATGTGAGAGTGAATGTGAGAGTGTAAGGGTGTTGCCCAGAACTGGGTTGTTCCTGGAAGGGCATCTGCTGTGTAAAACATAAGTTGGGTAAGTTAGCGGTTCATTCCGTTGTGGCAACCCTTGATGAATAAAGGGACTAAGCTGAAGAAATGAATGAATGAATTGTGCACATGGCCAGTGTGAGCCATTGCAAAAAAGTATTTCATTACAACAGCAGTAATAAACAATAAATTCTGTGGGTTTGCAGGTTCATCCATAATGTCCTTCTGTTTTGTTTTCTCTCCAGAACCATGTTACAGCCAATAAGGAGAAAGAGGAAGTGGAAGCAGCACGA[A/T]AGGTTTCTGAGAGCCAGACAAGCCGTCTGTCTCAGGAGATTGAGAGACTGCGCAAGAGGGCACAGGAGCTGGAGAACGAAGTGGCCAAACTCAACCGCATTATTGATGAAGCCAAACTGCAGGAGAGCCGGCTGGGGGAGAGAGCCAGTAGACTAGAGGTGCCTTCAGATTTCCATTTGTTTGATTGTGGGGAGAAAAAAATCTTACATTTTTAATACCCCTAACAGCAGTGGCTGAGAGAGCTCTCTGAATTAAAGGATTTTATTGAAAATAGGCTCATTTTACAAGTCCCCTAAACTTAAACATAAATCATTTAATTTTATTAGACCATTAAGTAAAAAATAACAATGTTTTGCTAATTTTGCTTGTTTTTTGTAATATCATTATGCCTGCTGCAGCCATGGTATGGCAGCAAAGTTTCTTGATTATTATGCTGGAGTTAGATTATAGTTCCTAGACATGTTAAGCTACTGTAGAAAATAGCACTTTTTTATTTCTGT
Associated Phenotype:
Not determined