Busch Lab

ZMP

cgnl1

Ensembl ID:
ENSDARG00000015805
ZFIN ID:
ZDB-GENE-071009-2
Description:
Cgnl1 protein [Source:UniProtKB/TrEMBL;Acc:Q58ED4]
Human Orthologue:
CGNL1
Human Description:
cingulin-like 1 [Source:HGNC Symbol;Acc:25931]
Mouse Orthologue:
Cgnl1
Mouse Description:
cingulin-like 1 Gene [Source:MGI Symbol;Acc:MGI:1915428]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa21073 Nonsense Available for shipment Available now
sa11664 Nonsense Available for shipment Available now
sa15287 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa21073
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052039 None None 486 None 11
ENSDART00000129769 Nonsense 208 1214 2 19
Genomic Location (Zv9):
Chromosome 7 (position 53948639)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 52218489
GRCz11 7 52493559
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AACGCCTTCCAGTTCCTCAGCCATCTACAGTAGCCAGCAAGCCCAGTGAC[C/T]AGACCAGGGCTTTGTCTAGACCTCCTAGCTCAGTGAGTAGTGCCAACTCC
Long Flanking Sequence:
TGGATTTTTTGTCACAGAAGGTCTATGGAGGTCCTCACAATGGAAGTTCAGATCCTAAGAAGCAATCTAGTCTTTTGAACTTCCAAAAGCATCCAGAACTTCTCAAGCCATATGATCCTGAAAGCAATACGCTTGACAGCTTTCAAAGTTTACCTGAAGTTGAAATTCAAAATCCCTACCTGGTACCCCAACCCACAACCAATTCCCCAGTTGCTAGCCAAGCCAGATCCTCCAGCCTAGTTCCAGAACCATTTTTAACAGATAACATGGGACATGCCCAACCTCAAGTTCGTCCCCAGACACTGCCGTTCGACAGCCGTCCACAAAGAGGTCCGACCAAAGACCAAGTTCAGACCCAGCCTCAGGTCAAACCCCAGGTTCAACCACAGTCTCAGGTCAAGGCACCTTTCAAGAATCCAGTGCCCTACCAGACTCAGTCACAGCCCTCAAAACGCCTTCCAGTTCCTCAGCCATCTACAGTAGCCAGCAAGCCCAGTGAC[C/T]AGACCAGGGCTTTGTCTAGACCTCCTAGCTCAGTGAGTAGTGCCAACTCCAGTCTGGAACGAAGCCGTCGTGAGCCGGATGTGCTGCCCTTACGCCGATTTGACTCCAGTGGCCCTGTGCTACAGACTTCTTCCTCCAGAAACTCCTCTGTGGGCTCCACCACACCAACCAAGGAAGACCAGTTGGAGCAGCTTTATTCAGAGAGTATCAACCGTCATGAGAATCGGCGCTACATACCCTTTCTGCCTGGCACAGGTCGGGACATTGATACTGGTTCCATCCCAGGTGTGGATGAGCTTATAAAGAAGTTTGACAGCAAAGAGACTCAGCAGCGCAGGGGACGGTCAGGGCGGAGGAATCGACTGAATCCAGAAGACCGCAAGCGTTCCCGTAGTGTCGACAGTGCCTTGCCATTCAGTCTTGGGGGCGACTCTGACTACTTGGATGAAGTTTCCCGAAATAGAGGCAGGTCTACAGAGCATCTCCTTCGCCCATCACTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11664
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052039 Nonsense 162 486 5 11
ENSDART00000129769 Nonsense 609 1214 6 19
Genomic Location (Zv9):
Chromosome 7 (position 53943444)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 52213294
GRCz11 7 52488364
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CGGGAGCTGGAGTRAAAGACTTGAGGAGAGAGCTGGAGCAGAGTCAAGCY[G/T]AGTGCAGTAGACTGAGGGAMAAGCTGAKTAAAACAGAGGCTGACCTGCGC
Long Flanking Sequence:
AGAACTGGAAAAAGAAATCGCTGATCTTAAGAAACAGCTTGAGAATGAGAGCAAGGTATCTCTCTCTCTCTCTCTTTTTCTCTTTCTCACTCTCTATCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCCCTCCCTCTCTCCCCCCCTCTCTAATAATACCTGTACTGCTTTAACTTGTCAACTGTACCTTGGACCCCTGCTCTGTCTGTGTAGTCAGTCGATTACAAGCTTCCACATTGACCGAAAATCCCACTCCTATCACCCTTTAAGTTCAATAATCAAATTAACCAATTACTTGGGCCTTAGATCCAAAAAAAGACTCCCTGTGTCTCAGACAGACAATTATTTGAAAGGTTTAGTAAGGTTACTGTCAATTCATGTCCTCACTGTCGTTTCTGATTACGTCCCGCCGGCAGAAGCGCAGTGATCTGAGTGAGATGCAGATGAAGGCGGGAGCTGGAGTAAAAGACTTGAGGAGAGAGCTGGAGCAGAGTCAAGCC[G/T]AGTGCAGTAGACTGAGGGACAAGCTGAGTAAAACAGAGGCTGACCTGCGCACTACAGTGGACGAGTAAGACGCTGATTCACACAGAATATGAACACTATATGAAATCATTTTCAAATTTGTCAATAAAACGGTAATGATTGAAGTAGAGCTGCAACTAACAATTATATTAATAATCAATTAATCTGTTGATTATTTTTTTCGATGAATCGATGAATTGGAATTTAAAAAAAAGAAAAGCAATGATTTCTGACCCTTTATTCAAAAACAGATCTAAAATCTTGGTAACGTGCACACAAATGTTGTCCTTAAGCCTCCCTGAGCCGTTATAATAATAATAATAATAGTAAAGTAAAAAAAAATACTTAGTAGTTTTGTCCTGTTTTTAATGGTTTAAATGCCATTTTTCTTGTTTAGCCTTGATTAAACTTATATTTGGACTGGAAACAAGACGAAATTAATAATAAGAATATTCACTCGCTAGCTCATCATGTCATCAGCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15287
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052039 Nonsense 318 486 8 11
ENSDART00000129769 Nonsense 775 1214 10 19
Genomic Location (Zv9):
Chromosome 7 (position 53917847)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 52187697
GRCz11 7 52462767
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGAACCATGTTACAGCCAATAAGGAGAAAGAGGAAGTGGAAGCAGCACGA[A/T]AGGTTTCTGAGAGCCAGACAAGCCGTCTGTCTCAGGAGATTGARAGACTG
Long Flanking Sequence:
AAGGTCGCTGGTTCGAGTCCTGGCTGGGCCAGTTGGCATTTCTGTGTGGAGTTTGCATGTTCTCCCCATGTTGGTGTGGGTTTCCTCCATGTGCTCCAGTTTCCTCCACAAGCTCAAATACATATGCTATAGGTGAATTGAATAAACTAAATTGGGTGTAGTGTGAATGTGAGAGTGAATGTGAGAGTGTAAGGGTGTTGCCCAGAACTGGGTTGTTCCTGGAAGGGCATCTGCTGTGTAAAACATAAGTTGGGTAAGTTAGCGGTTCATTCCGTTGTGGCAACCCTTGATGAATAAAGGGACTAAGCTGAAGAAATGAATGAATGAATTGTGCACATGGCCAGTGTGAGCCATTGCAAAAAAGTATTTCATTACAACAGCAGTAATAAACAATAAATTCTGTGGGTTTGCAGGTTCATCCATAATGTCCTTCTGTTTTGTTTTCTCTCCAGAACCATGTTACAGCCAATAAGGAGAAAGAGGAAGTGGAAGCAGCACGA[A/T]AGGTTTCTGAGAGCCAGACAAGCCGTCTGTCTCAGGAGATTGAGAGACTGCGCAAGAGGGCACAGGAGCTGGAGAACGAAGTGGCCAAACTCAACCGCATTATTGATGAAGCCAAACTGCAGGAGAGCCGGCTGGGGGAGAGAGCCAGTAGACTAGAGGTGCCTTCAGATTTCCATTTGTTTGATTGTGGGGAGAAAAAAATCTTACATTTTTAATACCCCTAACAGCAGTGGCTGAGAGAGCTCTCTGAATTAAAGGATTTTATTGAAAATAGGCTCATTTTACAAGTCCCCTAAACTTAAACATAAATCATTTAATTTTATTAGACCATTAAGTAAAAAATAACAATGTTTTGCTAATTTTGCTTGTTTTTTGTAATATCATTATGCCTGCTGCAGCCATGGTATGGCAGCAAAGTTTCTTGATTATTATGCTGGAGTTAGATTATAGTTCCTAGACATGTTAAGCTACTGTAGAAAATAGCACTTTTTTATTTCTGT
Associated Phenotype:
Not determined