ZMP
lck
Ensembl ID:
ZFIN IDs:
Description:
lymphocyte-specific protein tyrosine kinase isoform 2 [Source:RefSeq peptide;Acc:NP_001035418]
Human Orthologue:
LCK
Human Description:
lymphocyte-specific protein tyrosine kinase [Source:HGNC Symbol;Acc:6524]
Mouse Orthologue:
Lck
Mouse Description:
lymphocyte protein tyrosine kinase Gene [Source:MGI Symbol;Acc:MGI:96756]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa36417 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa410 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa36417
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000082356 | Nonsense | 23 | 503 | 1 | 12 |
ENSDART00000105478 | None | None | 503 | None | 13 |
ENSDART00000126663 | Nonsense | 23 | 503 | 2 | 13 |
Genomic Location (Zv9):
Chromosome 17 (position 25168152)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 25359843 |
GRCz11 | 17 | 25378234 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTTTTGATCCTGATGATGAATTCTCCTACCATCCAGATGAATGGTGTGAC[C/T]AGTGTAACTGCCCCAAGCCTCCAGTCAGTCAGGTGTGTGTTTGAGCATCT
Long Flanking Sequence:
TACACGATTCCTAAATATGTTGTTTTTTTTGTGAGAGAGACACCATCCTATAATAAATAGGTCTAAAATAATAATTGGAAAGGTTTTATGCATTTGTATTGTGTTTTATCATTCATTTTAAGCCAATTATAAGATTATAAGTCTTAATCTTAAGGATTATCTTAATGTTTATCTATCATATTGCATAATTTATTTATATTTATATAATTTATTTATTATTAATCAGCTTTTCAGTTGAATATATATTTTTACATGACTCTTTTTGGAAAAGCCTTGTGAAAAGTACTCAATAATATCAAAACATATTTATTTCTCATTAATTTAGGATTGTTTGGAAAGTGCTAGATCAGTTCCTCTTGAATTTATACACCGATTAATGTCTAACGCAGTCAGCATTCTTATAGTTGCACCATTTTCTCTCATGCTTAGTAAACATGGGGAACTGCGGCTCTTTTGATCCTGATGATGAATTCTCCTACCATCCAGATGAATGGTGTGAC[C/T]AGTGTAACTGCCCCAAGCCTCCAGTCAGTCAGGTGTGTGTTTGAGCATCTGTGTTTGTGTGTGTACTGTGTTTAAATAATGGCTTCCACTTCCGGTTTAGAAAACTTCCACTCAACATGACTGAAAAATCATTCTAATTATAAAGCTCAACTAAATAATAAGACACTGTTTGAAAGAGCTATATATTTTCTATCATGCTGTTTTTTTTAAGTGAGAAAATAAGTATGTTTTTTACAAACCGCGCTAAAACATATAATTGTCTCCTTATTTTTCTTAGCATTTTAAAACATCAATTTTGATCATATACAGTACATTTATAAACAACAACCATATGTGTATATAAACCTATACAGAATTCACTTTCAGTGCAACCATAATACTGCTAATCTGCTGATACTCTTACACTTTTAATACTCTTGCTAATACTCTTAGACGTTAAAGATTTCTTTAGATGGTGTAAGGGGAATAATGTCACCTTATTCTATCCTGGTTTAGCAAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa410
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000082356 | Nonsense | 120 | 503 | 5 | 12 |
ENSDART00000105478 | Nonsense | 120 | 503 | 6 | 13 |
ENSDART00000126663 | Nonsense | 120 | 503 | 6 | 13 |
Genomic Location (Zv9):
Chromosome 17 (position 25162106)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 25353797 |
GRCz11 | 17 | 25372188 |
KASP Assay ID:
554-0269.1 (used for ordering genotyping assays)
KASP Sequence:
CTCAAATGAAGTGAAAACTCTAATAAAATGACATCGTTGTGTTGCAGGTG[G/A]TTCTATAAAAATCTCTCCAGGAATGACGCCATGAGGCAGTTACTGGCTCC
Long Flanking Sequence:
TGATCCTGAATGGTACATGGCGGAGTCTCTGTTCACCGGCCAGAGGGGTTACATACCAAAGAACTTTGTAGCAAAACTGAACAGCATGGAGACAGAACCGTAAGTAATGCAATGCTCACTCGCATACAGTCACATACACCCAAACAAATACACACAATTAAATGTATTTATGCAGATGAAATCATCAGAATGACGTCTGGGAAATACCACCCACTTCAGTGGCTAAAATGTTTCACTTAGGATACCCCTTACCCACTTATGAAGACAGATGATCAAGAAGTCAGTAAAGAAAAAAAAATACTCCCACAAAACACACACGTTTCTGAGCATCGCTATGTTTAACCACTGCAGTAGCTGCTGACACCACATTTCTGCGTTAAGTTCCAGTCTGTGAATGTTTCTCTTCCAATCGTGGGAGGAGTGAAAAGCACCAAGTCTGAATTTCTGTAACTCAAATGAAGTGAAAACTCTAATAAAATGACATCGTTGTGTTGCAGGTG[G/A]TTCTATAAAAATCTCTCCAGGAATGACGCCATGAGGCAGTTACTGGCTCCTGGCAACACACAGGGCTCGTTTCTCATCAGAGAGAGCGAGACGCAGCCAGGTAGCCTTGCACTTTTCCCCACAACAACAACAAACTAAAAATGTACAGTATTATAAGGGCACATCTGACAGTGCTATCACATTATGGCTTTGATATCTTTCTAGATTTAAATATGAAAGTTAAACTAAATGTAAAAAATTTATGTAATTTTTATAAATAAACAACAGTAAGACATATTATTAATGATATAAATAATGCATTTCTGCTTTTTCAATTCTATACCCAGCTCATCTCAGCTATAATTAATGCATTAGCATTGTTATGTAATTTTGCATATTAGTTATTATTAATATCTTAATAAATATATTAGGTCACACTTTATTTTGATGGTTCGTTGAATTTAAGCTACATTGCATCTACATGCCAGCTATATCTCATTAGATTATAAGTAGACTGTTAG
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |