Busch Lab

ZMP

trpm1

Ensembl ID:
ENSDARG00000011259
ZFIN ID:
ZDB-GENE-070112-1372
Description:
transient receptor potential cation channel, subfamily M, member 1 [Source:RefSeq peptide;Acc:NP_00
Human Orthologue:
TRPM1
Human Description:
transient receptor potential cation channel, subfamily M, member 1 [Source:HGNC Symbol;Acc:7146]
Mouse Orthologue:
Trpm1
Mouse Description:
transient receptor potential cation channel, subfamily M, member 1 Gene [Source:MGI Symbol;Acc:MGI:1

Alleles

There are 11 alleles of this gene:

Allele Name Consequence Status Availability
sa10704 Essential Splice Site Available for shipment Available now
sa10436 Nonsense Available for shipment Available now
sa11580 Essential Splice Site Available for shipment Available now
sa38616 Nonsense Mutation detected in F1 DNA Not yet available
sa20961 Nonsense Available for shipment Available now
sa40909 Missense, Splice Site Mutation detected in F1 DNA Not yet available
sa44666 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa15286 Nonsense Available for shipment Available now
sa40908 Nonsense Mutation detected in F1 DNA Not yet available
sa30632 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa10704
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052584 None None 1546 None 25
ENSDART00000086664 None None 319 None 9
ENSDART00000140938 None None 297 None 8
ENSDART00000147251 Essential Splice Site None 191 1 6
ENSDART00000147919 None None 1306 None 24
Genomic Location (Zv9):
Chromosome 7 (position 30677786)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 29070128
GRCz11 7 29341278
KASP Assay ID:
2259-8936.1 (used for ordering genotyping assays)
KASP Sequence:
ACAAGTCTGGCTTWATGTAAGCCTTTGGTCTTTCTCTTTAACTTCAAGGG[T/C]AAGTTCTAGAGTAGTATATNNGTACTACAACCTGTTTGCCTACCAGACTTTG
Long Flanking Sequence:
TGAATGAGAGCACTTATGCTTTATTTGATTTCAGTATGAGGTTATTTTTGCTATGACGCAGCTACAATAACAATTGTGTGGATCACCTTTCTCAAACAGTTACTTATTTACTGTTTCCAAAATAATAATTTAATGGCTTTAGGATCGTAATACTGACTCCATCTTTCCCCAGTTTACCTCAACAAACATCAGTTAGAAGAGGTGTAGAGGGGCTACTGGGTGAGATTAGCATGTTGACCAATAGAACAGATTAGAGAACCCCTGGTCTCAAACTGGGCTTTAGTTTGTGTTGTTCCATATCGGTCATGAGGTTCGAGGAGGATTATCTTTAGGACTAGTCATGGGACTCTGAGACCGAGGTCCAGACACGTGGTCAAGGGCAAAATAAAGACCACTGCACCATAAATGAAGGCCACTGGCTGTTGAAGGAGACTAGAAGAAAACTTCATGACAAGTCTGGCTTTATGTAAGCCTTTGGTCTTTCTCTTTAACTTCAAGGG[T/C]AAGTTCTAGAGTAGTATATGTACTACAACCTGTTTGCCTACCAGACTTTGCTTTGCTGAGAGCTTTATTATAGACATATTTCTAGCAGTCACAATAGGATTTCGGTCTCTGGAATTGTTTTTTTCAGTGATGTAATTGGCAGTTTTTTGGCATATCTCTGTAAGTATTCTTGTATTAAACAAACAACATTAGGCTGATTACCTATTATGTGATATTTTTAGGTTTCAAATATTAATGTGCTAAATGCCATATGCAATTAAAAAGGTTTACATTTATTCATAGGATAAAAAATGAGTGTGAGTGGAAAAGCACTGTTATGTATGTACTGTATATGACTGTGCGCTGACCTAGAAGAACTGTTTTCATAATTTTAATATGACTTAAGGGATTTCATTTACCAAGAGTGCTTTACAGCTAACATTCACCCTAGCTCACGCCAGATATGCTTTATTCACACTAACACACCTATCTACACGTAGATCTATCTATCTATCTATCTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10436
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052584 None None 1546 None 25
ENSDART00000086664 None None 319 2 9
ENSDART00000140938 None None 297 2 8
ENSDART00000147251 None None 191 2 6
ENSDART00000147919 Nonsense 26 1306 1 24
Genomic Location (Zv9):
Chromosome 7 (position 30676864)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 29069206
GRCz11 7 29340356
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CATTTCTAAAAAGAGAGWGCAATCATATATTCCCCAGCAAAGAGCCCAAC[A/T]AGTCAGTAGCAATGTTTTTATTGTATTGYTCATACTCCTGGGGTATGAAY
Long Flanking Sequence:
TCACCCTAGCTCACGCCAGATATGCTTTATTCACACTAACACACCTATCTACACGTAGATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATTTATCTATCTATCTGTATATGTGTGTGTATACATTACTGCTGTGATTTTTTTTTTTCTCTTCAGTAGTCAGAAATATGTTAAACACATAAGCCCCAGAACAGCTTGTTCATTTTTGTAGCTACTGAAATGGATTACAAAAGAGATTAAAGCATAGGTATTATGTGGAAATGGCATTTCCATCAGAAATAAGTGGGAACGAGTATACTAAATTTTTCTGTTTTGTGTCTTTCAGGCTCAGAGGGCATGGATTGAAAGGACATTTCTAAAAAGAGAGTGCAATCATATATTCCCCAGCAAAGAGCCCAAC[A/T]AGTCAGTAGCAATGTTTTTATTGTATTGCTCATACTCCTGGGGTATGAATAAGTTTGGGATTGACTGTGTATATACAGTATATAGATAATTACTAAAACTATAATCACTGAAAGACATGCTGGATGACAAACAACATGCTTGTAGATTAAAACACAATATCATTTTAACCTACACTCAAAATTTACTTGTTTAAAATAAGCTGAAAGAACACATTTCTTTAGTTTTTCGGGGAGAAATGTAAATGTTACTTTATTTCTACTTAAATAAAAAATAAATCAATATCTTGACCTTATTCCTTCCTGTTGTCCTAACATAAATCAATTGTGTGGAGCCCAGCATTTTTTACAGTGTATAAACATTCTTGATCAATCTGCATTAAAGGAAAAGTTTAATTAAACCATTTTAAAAACATGCGCTGATGGTTAATAGTGCTTTTATCTTCTTCGCTACTTCTGTTAGATGCTGTTGCGGTCAGCTGGTTAACCAACATGTGGCTATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11580
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052584 Essential Splice Site 22 1546 2 25
ENSDART00000086664 Essential Splice Site 22 319 4 9
ENSDART00000140938 Essential Splice Site 22 297 4 8
ENSDART00000147251 Essential Splice Site 22 191 4 6
ENSDART00000147919 Essential Splice Site 93 1306 3 24
Genomic Location (Zv9):
Chromosome 7 (position 30676076)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 29068418
GRCz11 7 29339568
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTAACATTTGATCAATTAAAATCTTCTCATYACTTTCTTSCTTGTTATTA[G/A]TATATCCGTGTGTCCTACGATACGAAACCGGATAACCTTCTGCATTTGAT
Long Flanking Sequence:
ACCTTATTCCTTCCTGTTGTCCTAACATAAATCAATTGTGTGGAGCCCAGCATTTTTTACAGTGTATAAACATTCTTGATCAATCTGCATTAAAGGAAAAGTTTAATTAAACCATTTTAAAAACATGCGCTGATGGTTAATAGTGCTTTTATCTTCTTCGCTACTTCTGTTAGATGCTGTTGCGGTCAGCTGGTTAACCAACATGTGGCTATTCTTCCCGGTTCCACCAATAAGAATGTGGAAGAAGGTCAGGTGGTGCCGATTGAGCCCCCTCAAGAGAAATGGTCGGTTGCGAAGCACACACAAGCCATGCCTACTGATTCATATGGCATCATTGAGTTCCAAGGAGGAGGTCATATCAACAAGGCCATGGTATGTTTTTCAGATAAACATGCAATTCAATTGTTTTTCTTTAAAAGCAAAGTTGCCAATGTACTTTGGAATCATGTCTTAACATTTGATCAATTAAAATCTTCTCATTACTTTCTTCCTTGTTATTA[G/A]TATATCCGTGTGTCCTACGATACGAAACCGGATAACCTTCTGCATTTGATGGTAAAGGACTGGCAACTAGAGCTGCCCACCCTGCTGATATCTGTGCATGGCGGGCTGCAAAACTTTGACCTGCAGCCCAAACTCAAGCAAGTGTTCGGAAAGGGTCTGATAAAAGCAGCAGTCACCACTGGGGCCTGGATCTTCACTGGGGGAGTTAGTACAGGTGGGTGTTTGACTATTCAAACAGTCAGTTATCTTTTTATTTGTGTATCCCATTGGAATCTGTCTGAATGACTGACTGTCCACACTGTGTATCAAAACTCTTCACACCCATTTTGTTTGCCTTATAGTGATTTTTTTTTACATAATTATCTTGGTTTCATGTGTTAATGTGAATTTTGATTTTGTTTACACTGGTTACCATGACAGCAACATCATGTTGGCATGACTGTGCCAAACAGCAACAACAACAGCAATTAACAATGTGACAACAGGTTGCCATTGCACTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa38616
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052584 Nonsense 68 1546 2 25
ENSDART00000086664 Nonsense 68 319 4 9
ENSDART00000140938 Nonsense 68 297 4 8
ENSDART00000147251 Nonsense 68 191 4 6
ENSDART00000147919 Nonsense 139 1306 3 24
Genomic Location (Zv9):
Chromosome 7 (position 30675937)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 29068279
GRCz11 7 29339429
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATCTGTGCATGGCGGGCTGCAAAACTTTGACCTGCAGCCCAAACTCAAG[C/T]AAGTGTTCGGAAAGGGTCTGATAAAAGCAGCAGTCACCACTGGGGCCTGG
Long Flanking Sequence:
ATAGTGCTTTTATCTTCTTCGCTACTTCTGTTAGATGCTGTTGCGGTCAGCTGGTTAACCAACATGTGGCTATTCTTCCCGGTTCCACCAATAAGAATGTGGAAGAAGGTCAGGTGGTGCCGATTGAGCCCCCTCAAGAGAAATGGTCGGTTGCGAAGCACACACAAGCCATGCCTACTGATTCATATGGCATCATTGAGTTCCAAGGAGGAGGTCATATCAACAAGGCCATGGTATGTTTTTCAGATAAACATGCAATTCAATTGTTTTTCTTTAAAAGCAAAGTTGCCAATGTACTTTGGAATCATGTCTTAACATTTGATCAATTAAAATCTTCTCATTACTTTCTTCCTTGTTATTAGTATATCCGTGTGTCCTACGATACGAAACCGGATAACCTTCTGCATTTGATGGTAAAGGACTGGCAACTAGAGCTGCCCACCCTGCTGATATCTGTGCATGGCGGGCTGCAAAACTTTGACCTGCAGCCCAAACTCAAG[C/T]AAGTGTTCGGAAAGGGTCTGATAAAAGCAGCAGTCACCACTGGGGCCTGGATCTTCACTGGGGGAGTTAGTACAGGTGGGTGTTTGACTATTCAAACAGTCAGTTATCTTTTTATTTGTGTATCCCATTGGAATCTGTCTGAATGACTGACTGTCCACACTGTGTATCAAAACTCTTCACACCCATTTTGTTTGCCTTATAGTGATTTTTTTTTACATAATTATCTTGGTTTCATGTGTTAATGTGAATTTTGATTTTGTTTACACTGGTTACCATGACAGCAACATCATGTTGGCATGACTGTGCCAAACAGCAACAACAACAGCAATTAACAATGTGACAACAGGTTGCCATTGCACTACAATATAATGCTTTATCAGGCAGCAGCTTTATAAGGGACATGAAGACCAATATGTTAACCCATACTGTGACTTTGGGCTTTCATTTTTAAGTGAATATACACCAGTGAGCAGTGAGAACTAGGCACGTGACAATAAACG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20961
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052584 Nonsense 279 1546 6 25
ENSDART00000086664 Nonsense 279 319 8 9
ENSDART00000140938 Nonsense 279 297 8 8
ENSDART00000147251 None None 191 None 6
ENSDART00000147919 Nonsense 350 1306 7 24
Genomic Location (Zv9):
Chromosome 7 (position 30672950)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 29065292
GRCz11 7 29336442
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCATACAGAAGACGTTCAACTATAACCGTAATCAAGCACAGCAGATTTA[T/A]CTCATGGTGATGGAGTGCATGAAGAAAAGAGAGCTGGTAAGTAAAAAAAA
Long Flanking Sequence:
TTGTGCTTTGATGTACATGAGTTTGTTTGATGTCTGTTTGGACAGGTCTGGGTCAGGGGGTCCCTTTGGTGTGTCTGATTCTCGAAGGCGGGCCGAATGTAATCTCCATTGTGCTGGAGAGTCTGCGAGAGGATCCTCCTGTGCCTGTGGTGGTGTGTGACGGCAGTGGGCGAGCATCAGATATCATTTCATTCGCTCACAAATACTCAGAGCAGGATGGGTGAGGAAAATATTAGTGATTATTCAAATGATTTAATCAATCTTAAAAGTACAATTCGGAAAACGCTTTTTGTAAGGAAGAACAGAACATAATTGTTGTTCTTACTGATAGGTTGCTGATTAAACACATTTGTGACTTTTATCTTAAAACCCATTTTATACCTATAGATTTAAAAATGCTTGTTATTTTGCAGGTTGGTTAATGACAGTGTTAGAGACCAGCTTCTAGTCACCATACAGAAGACGTTCAACTATAACCGTAATCAAGCACAGCAGATTTA[T/A]CTCATGGTGATGGAGTGCATGAAGAAAAGAGAGCTGGTAAGTAAAAAAAAAGAATAACACAATAGAAAAGATATGTTCCATATTTTTACCCTATTTTACTTTTTTATGTGCTGTATATTTATGATTAACATTTTTGCTTAATTGTGTCATACAGATTTGATAATAAACACGACTCATGATCCTTCATTTGGTCTCATTTGCCTTTTTTCATTATTATTCTCTTATTGATGTTCTCTTTTTCTTTTCATAAATCTGAAAAGATCCATCTCACAACTTTTCATTGTTTCCATGTCATTGCATTGAATGTTATTGTCCTTCATGAACACATAGACATGAAACTTCCTTGAGACCCTGAGACATGTGAAGAGCACATTTTAACTATGAGAACATTTAAAAACTAAATAAAGCTTTAGCATCTTCACTATACTGTGTGGTAATTTATCTTAATTTATCATAACTGGTTTAGATTTTAGTGTTAAAATATGCTGTAAATATTTTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40909
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Missense, Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052584 Splice Site None 1546 None 25
ENSDART00000086664 Missense 293 319 8 9
ENSDART00000140938 Missense 293 297 8 8
ENSDART00000147251 None None 191 None 6
ENSDART00000147919 Splice Site None 1306 None 24
Genomic Location (Zv9):
Chromosome 7 (position 30672908)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 29065250
GRCz11 7 29336400
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGATTTATCTCATGGTGATGGAGTGCATGAAGAAAAGAGAGCTGGTAAG[T/A]AAAAAAAAAGAATAACACAATAGAAAAGATATGTTCCATATTTTTACCCT
Long Flanking Sequence:
CAGGTCTGGGTCAGGGGGTCCCTTTGGTGTGTCTGATTCTCGAAGGCGGGCCGAATGTAATCTCCATTGTGCTGGAGAGTCTGCGAGAGGATCCTCCTGTGCCTGTGGTGGTGTGTGACGGCAGTGGGCGAGCATCAGATATCATTTCATTCGCTCACAAATACTCAGAGCAGGATGGGTGAGGAAAATATTAGTGATTATTCAAATGATTTAATCAATCTTAAAAGTACAATTCGGAAAACGCTTTTTGTAAGGAAGAACAGAACATAATTGTTGTTCTTACTGATAGGTTGCTGATTAAACACATTTGTGACTTTTATCTTAAAACCCATTTTATACCTATAGATTTAAAAATGCTTGTTATTTTGCAGGTTGGTTAATGACAGTGTTAGAGACCAGCTTCTAGTCACCATACAGAAGACGTTCAACTATAACCGTAATCAAGCACAGCAGATTTATCTCATGGTGATGGAGTGCATGAAGAAAAGAGAGCTGGTAAG[T/A]AAAAAAAAAGAATAACACAATAGAAAAGATATGTTCCATATTTTTACCCTATTTTACTTTTTTATGTGCTGTATATTTATGATTAACATTTTTGCTTAATTGTGTCATACAGATTTGATAATAAACACGACTCATGATCCTTCATTTGGTCTCATTTGCCTTTTTTCATTATTATTCTCTTATTGATGTTCTCTTTTTCTTTTCATAAATCTGAAAAGATCCATCTCACAACTTTTCATTGTTTCCATGTCATTGCATTGAATGTTATTGTCCTTCATGAACACATAGACATGAAACTTCCTTGAGACCCTGAGACATGTGAAGAGCACATTTTAACTATGAGAACATTTAAAAACTAAATAAAGCTTTAGCATCTTCACTATACTGTGTGGTAATTTATCTTAATTTATCATAACTGGTTTAGATTTTAGTGTTAAAATATGCTGTAAATATTTTTTTGTCTTAGAATAACTGTGCAAACTTAGTGTACTATAATTGTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa44666
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052584 Essential Splice Site 315 1546 7 25
ENSDART00000086664 None None 319 None 9
ENSDART00000140938 None None 297 None 8
ENSDART00000147251 None None 191 None 6
ENSDART00000147919 Essential Splice Site 386 1305 8 24
Genomic Location (Zv9):
Chromosome 7 (position 30671627)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 29063969
GRCz11 7 29335119
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAAGGTCAGCAGGATATTGAGATGGCCATCTTAACTGCTCTGCTGAAAG[G/A]TGAATTTATGTTCAGACCACAGTCACACAGTTTACAATAGCACTGACCCT
Long Flanking Sequence:
GTCTCAAAAGCAGCATCAGCTGTTAGAGTCTATTTAGTGGAGACTTGGAGCAGGTGTGTGTGTGTGTGTGTGTTGCGTGACTGAATATGTAGTCCATAACATGGCGGATTTGTATATATAATATGCATCAGTAGAGTTGTCACCCAATGTCATTCCATTCATTGATCATTAGTCAAGTCAAGGACTCTGTTATACTGTTATAATTCTGAAGAATAAATTGCTTCTGAAAATTAAGCTTTGCATTTAAAAGTTAAATATATTTTTAAAAATATTAAAATAAAAAACAGCTGTTTTAATAATAAATAAGCAATTTTCTATTTTCTGAACCCAAACCTTTCCATGCTTGTGCAATTGTAAAATAGTTTTATTTAGCATACTATGTTTTTACATGCTTCCCACACAGTGTTTACCTTTTGTGCTGAAACAGATCACAGTCTTTCGCACGGCATCAGAAGGTCAGCAGGATATTGAGATGGCCATCTTAACTGCTCTGCTGAAAG[G/A]TGAATTTATGTTCAGACCACAGTCACACAGTTTACAATAGCACTGACCCTGAACATCCTTTAAACATCCGGAAAAATTATTTGTTTCTTATTAGAATATTACTACTGTTAATATTCATATTTTCCGAAATATATTGTTTATCTTGTTTTTTTCTCTCTAATTCCATAAACATTCTTAAACATTTGGTTTTGACAAGAAAGTTCACTCAAAAAAAACATTTCTGTCATCAGCTAACCTTTGACATGTTCCAAACCAGTTTGAGGTTTTTTTTTTGTTTTTTTGTTTTGAGTTCTGTTGAACATAAAAGAAGATAATTTGAAAAATGTTGGAATCTGGTAACCAAACAAATGCTATGTAAGTCAGTGGTTACCATTTAAATTATTAAATTATTTCCTCTGGGTTTGTCAGGCACAAATGCCTCAGCTCCAGATCAGCTGAGTTTGGCTTTGGCCTGGAACCGTGTGGATATTGCTCGAAGTCAGATCTTTGTTCATGGACAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15286
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052584 Nonsense 400 1546 9 25
ENSDART00000086664 None None 319 None 9
ENSDART00000140938 None None 297 None 8
ENSDART00000147251 None None 191 None 6
ENSDART00000147919 None None 1306 None 24
Genomic Location (Zv9):
Chromosome 7 (position 30669733)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 29062075
GRCz11 7 29333225
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGGGCWAAGGTGCCAAATCAAAACCTGAGCCACCGGAGGAGACAGACCCT[A/T]GAAAACTAGAGCTGCTGAACTGGGTAAGATTTACTCWTTAATAGTTGTAT
Long Flanking Sequence:
CTGCAAAACATGCATCAACAAAGTATTGAGCAAAGGCTGTGAATACTTATGTACATGTGGTTTTTCAGGTTTTTTTTATTTGTAATAAATTTGCAACAATTTAAAAAAATCTCGTTTCACATTGTCATCATGGGGTATTGTGTGTAGAATTGTGAGGAAATAAATTAATTTAATCTTTTTTTTTAAAATAAGGCTGTAACAAAAAAACGATAGAAAACAGTGAATCACTATGAATACTTTCCCGATGCACTGTAGCACACAACTTGCTTATACAGATTAAAATGAATAATGGTTATTAAAAAGAAAACACATGATGGCGCTATTAAATACTCATTTCTCTATATTTTCAGCCTGCTGGGTCTCTGCCCACCTCATCCACAGGTCAGCAGGACAAACCAAAGAGCCCCATCGCCACCCGTGTCAGCAAAGGTAAACCTGCCAGGGGCAAGAAGGGCAAAGGTGCCAAATCAAAACCTGAGCCACCGGAGGAGACAGACCCT[A/T]GAAAACTAGAGCTGCTGAACTGGGTAAGATTTACTCTTTAATAGTTGTATCAAAAGTACCAGAACTGGGTTAACATAGAATCCAATGATAGACTCTATGATGACTCTATTCTTTGTACATTTGCATGATTGAACAAGAGCATCAGATGTTTGTATCCAAAATGTTTTTTCTTGTATCATAGCCTAGTCTTGTATTGCCATACCTCAGATCGTTAAAAAAATTCTGAACTCCATAAGGATGTTTGGAATCACAATGGCTTTGTTTCCAGGGAATCCATTCAACAAATCAGATGATGACATCAAAACTACCAAAGAGTTTACCTTCGTGTGTGCTTTATGTATCAGATCATCAGGCAACAGTTTGTGCATATGATATCTGTGACTAAATGTAATTGTAGCCAATCCCAGACAGGCTGAGCGCATAAACCTATTAGCCAACTATTAGAAGCATTTAAGTCAGAATTTAATTCAGCATAAGCTCTGTGCTTTTGCAAATAGTTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40908
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052584 Nonsense 829 1546 18 25
ENSDART00000086664 None None 319 None 9
ENSDART00000140938 None None 297 None 8
ENSDART00000147251 None None 191 None 6
ENSDART00000147919 Nonsense 840 1306 18 24
Genomic Location (Zv9):
Chromosome 7 (position 30660328)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 29052670
GRCz11 7 29323820
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CATCATTGCAGGAATGGATCGTCATTTCCTACATCATCACTCTTGGACTG[G/T]AGAAAGTTAGACAGGTGATGCATACAAGCAAAATAATATGTTGCTATATT
Long Flanking Sequence:
TATTATTATTATTATTATTATTAAGAGATATGGTCCATCTCTTTCTTGTAAAGATTTAGGTGGCACTGTATGTATGTAGGTTTTTACAATAAAAATCTTAGCACACTCATATTTTGAATGAGATGAAAAGTGAAAAAATATCATAATGGATATTCAATTTTCAGGATGGCACAGTGAGCATGGATGCAACATCCAAGAAGGGTGATGAGGAAGATGGTAAAAAGAAACAGAAACGACTGCCTGTTGGAAAGAAGATTTACTATTTCTTTAACGCTCCATATACCAAGTTCTGGTTCAATACGGTATGTGATACTTTAAAAAACAAATGATAAAAAAAAGTCACAGCAGTCATCTATAACTGGTATTGAATTTATTTTTCTTCTTAGACTGCATACCTGGTGTACCTGATGCTGTATAACTACATCATCCTGGTGAAAATGGAGAGATGGCCATCATTGCAGGAATGGATCGTCATTTCCTACATCATCACTCTTGGACTG[G/T]AGAAAGTTAGACAGGTGATGCATACAAGCAAAATAATATGTTGCTATATTATAATTAGGGCTGTTAATCAATTAATTATTTAGCCTACTTTTATTAATAGTCTTAATAAGTAGAATTTAATTAATGGATTTAATTAAATCACATATTAAATCTGACTGAGACATTTAGGAGCTTTCGCCTTGAATACATGACGTGAATTCACTTTTTTACACAATTTGGAGGACAGAGTATTAATTGCAAAGAAAAATGTATTGCAATTACATTGCAAATAAAAACACATTTTCTTGCAGTTTACTAATTAATTCAATTAATGCATTGAATAGACAGGCCTAATGATATGTTTACACATTTATTTTTTAATTTAATACTCTAATAATTCTTTAATACTTTATTTGTGTGCAGATCCTGATGTCAGAGCCCGGAAAGCTGAAACAGAAGATAAACGTTTGGCTTGAGGAGTACTGGAACATCACTGATCTGGCTGCCATCACCACCTTCCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa30632
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052584 Nonsense 1116 1546 24 25
ENSDART00000086664 None None 319 None 9
ENSDART00000140938 None None 297 None 8
ENSDART00000147251 None None 191 None 6
ENSDART00000147919 Nonsense 1126 1306 23 24
Genomic Location (Zv9):
Chromosome 7 (position 30653959)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 29046301
GRCz11 7 29317451
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCTGACTCTGAGTGCTGAGGAGCTGAAGAGTCTGTATGAGTTTGAGGAG[C/T]AGAATGTGGAGGAGTATTTCAGAGAGAAGGAGGATGAGGTGCAGTCTTCC
Long Flanking Sequence:
TCATGGCCTGTTACCTACTGGTAGCCAACATCTTACTAGTCAACCTGCTCATCGCTGTGTTCAAGTGAGACTGCATGCAAAATATTATAATGTATTGAATTAGGACTTTCACATATATTCAGTTTCAGCACTGATCTAACCTATTCCCTTCACAGTAACACATTCTTTGAAGTAAAATCCATCTCCAACCAGATCTGGAAGTTTCAACGCTACCAGCTCATCATGACGTTTCACGACAGACCAGTTCTTCCTCCACCACTCATCATCTTCAGCCATATTTACATCGTGTTGAAGCGCCTGTGCTGCCGCTGCCGGAAGAAACAAGAAGGAGAGCTGGATGACAGAGACCACGGCTTGAGTATTTACTGCTTTTGTTCAATTTTAGTGCTGGTAGCGTATCAGTGAAATAGCAAACCGTTTAACCTGTTTGTAATGATGTTTTTTTTCCAGAGCTGACTCTGAGTGCTGAGGAGCTGAAGAGTCTGTATGAGTTTGAGGAG[C/T]AGAATGTGGAGGAGTATTTCAGAGAGAAGGAGGATGAGGTGCAGTCTTCCAATGATGAGCGCATCCGAATCACTTCCCAGAGGTACTGGATGGAAAACAGCTAGTGCAACTTCTAATTTTATTTCAGAAGTTGACAATAAAGGTTTTTCTAATGTTTAGAATGTGTTTTTTTAGGAATAAGTTTTCTGTTTTTTGGTTTATTTATTTAATTTTTTAAAAGAAAATATTTTGCAGTAAGGTAAAATTTTACTCCATACATTCATAAACAGTTTATAAGTTTGTAAAATTATATATTTTAAAGGGCCCCTATGATGAAAATCATCTTTTGTAAGCTGTTTGGACACGACTGTGTGCAGGTATAGTGTGTTCACAGTCAAATTGGGGTGATATAAAGATAATAAGTCTCTTTATTTAAATTTTCTGACGTTAAAAAAGGATCCAAATCCCTCCAATTTTGAGGCCCATAGCAATGTGACAAAGGAGTGCGGTTTCCCCGTCCA
Associated Phenotype:
Not determined