ZMP

pdzrn3

Ensembl ID:

ENSDARG00000073869

ZFIN ID:

ZDB-GENE-071022-4

Human Orthologue:

PDZRN3

Human Description:

PDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:17704]

Mouse Orthologue:

Pdzrn3

Mouse Description:

PDZ domain containing RING finger 3 Gene [Source:MGI Symbol;Acc:MGI:1933157]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa20799	Nonsense	Available for shipment	Available now
sa40775	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa20799

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000114330	Nonsense	25	1053	1	10

Genomic Location (Zv9):

Chromosome 6 (position 44333209)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	6	44404373
GRCz11	6	44401909

KASP Assay ID:

2259-8030.1 (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CAAGGGGGCTGTGGACCCAGACTTCAAATGCAACTTGTGTAATAAAGTTT[T/A]GGAGGATCCGCTCACTACCCCGTGCGGTCATGTCTTCTGCGCCGGCTGTG

Long Flanking Sequence:

TAAAAATGTATAATTAAAAAACAGTATAGTGTAAATGGTTTTAAAAAGCTACTATTTAAAACTAAGAAACAACATGAAATGTTTGATTTAAAACGTCTGCTTGCATTATAAATCACTGTACAAACAAAAGTTGTTATCTAACTGCACAACCTCCATATATTTAAAGTATGCACTAAGTAGCAAAAACTTTTTGCTACTTGGCCAACTTGAGTGCGCAGTTTTTCTGATCCTTACGGTACCCAAATCTGCAACACTTCTCTCCCCCATAGGAAGTCTCAGGCAATTAGTTCAGTCAGGAGAAGTGCCCGTACTGGTCTACTCAGTTTCTCTGAGCTCTTCTAATGACTTAACCCGAAGAGTGATCAAACCCCTGCGCTATTCTGTGGGAGCCTTGCTTTGGATATTCCATAAAAAAACAATAATAATAATGGGATTTGAGTTGGATCGTTTCAAGGGGGCTGTGGACCCAGACTTCAAATGCAACTTGTGTAATAAAGTTT[T/A]GGAGGATCCGCTCACTACCCCGTGCGGTCATGTCTTCTGCGCCGGCTGTGTGCTGCCTTGGGTCGTCCAGCAGAGCAGCTGCCCAGTCAAATGCCAGAGGATCTCTACAAAAGAGCTCAACCACGTCCTCCCTCTCAAAAACCTAATATTAAAGTTAGACATCAAATGTGACAATCACGCTCGGGGCTGCGAGAAGATCGTCAAACTCCAGCATCTGGCGGAGCACGCGGAGATGTGCGATTATTCCCCTGCCAAATGTAGGAATAAGGGCTGCAGCGAGGTGCTCAACCTGAAAGATATGGATGCTCACATGCGTGAATCGTGCGATTACAGAGCGGTCGGGATATGCGAGAGTGGATGCGGATTGATGCTCACTCATAAAGAGCAGAAGTTGGACAACCACTGCTGCTTGAAAGCTCTCAAAGCGCACAACGGCGCGCTGCAAGGGAAAGTTGTCACCTTGGATAAGGAGCTCAAGAAACAAGCTCTGAAGTCCACTA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa40775

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000114330	Nonsense	611	1053	10	10

Genomic Location (Zv9):

Chromosome 6 (position 44178003)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	6	44249167
GRCz11	6	44246703

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGACCAGCGCCTCCACCACACTGGGCAGCCGGCGCAGACTCGCATACAGT[C/T]AGGACACCCTTGGCAGTGGTGACCTCCCCTTCAGCAGCGAGTCCTTCATA

Long Flanking Sequence:

GTATATATAAATTTGCAACAATTTCAAAAAATCTTTTTTTCTCATTGTCTTTTTGGGGCATTGTGTGTAGAATTTTGAGGAAATAAATGTATTTAAGCCATTTTGGAATAAGGCTGTAATATAAAAATTGTGGAAAAAGTCAAGCACTATGAATACTTTGCAGATGCATTGTAGATTCGCCATCAGTATCATGAAAGAACCCAAACGATTCCTTATCCTGGCTTGAATGTATTCATACATAGAGTATGGTGTTATTGAAGGTTTTCACTGAAGAGATTAACAATATACCCTGAATTGTTTTGTTACAGAAAAAGCACGAGGAAGATGGAGGTACAACAGATACAGCCACACTGCTCTCCCACCACCATGAGAAAGACAGTGGTGTGGGCCGCACTGATGACAGCACTCGCAACGATGAGAGCTCTGAGCAGGAGAATCTCGCAGATGACCAGACCAGCGCCTCCACCACACTGGGCAGCCGGCGCAGACTCGCATACAGT[C/T]AGGACACCCTTGGCAGTGGTGACCTCCCCTTCAGCAGCGAGTCCTTCATATCTGCAGACTATGCAGACGCAGAATTCTTGGGTGACTTTCCTGCTGATGAATGTGAGCGGTTTCGGGAACTTTTGGAGCTGAAGTGCCAGATGCAGAGTGCAGGCAGTAGTGGTACCCCAGATCAAAGCTTGTTGTGGCCCAGTGGTGGACAAGGCGGTGTTGGAGAGGAGGGTGTCGACAAAGAACTGGAACTTCTGAATGAGGAGCTCCGCAGCATTGAGCTTGAATGCCTGAGCATAGTCAGAGCGCACCGCATGCAGCAGTTACGGGAGCAGTGCCGCGAACAGTCCTGGATGCTGCACAACAGTGGCTTTCGCAACTACAACACAAGCGTAGATGCAAGGCGTCACGAGTTAGCAGACATCAGTGAACTTCCGGAAAAGTCTGACAAGGACAGTTCCAGTGCATACAATACTGGTGAAAGTTGCCGTAGCACCCCGCTCACATTA

Associated Phenotype:

Not determined