ZMP

zgc:171734

Ensembl ID:

ENSDARG00000004864

ZFIN ID:

ZDB-GENE-070928-26

Description:

forkhead box protein R1 [Source:RefSeq peptide;Acc:NP_001096594]

Human Orthologues:

FOXR1, FOXR2

Human Descriptions:

forkhead box R1 [Source:HGNC Symbol;Acc:29980]
forkhead box R2 [Source:HGNC Symbol;Acc:30469]

Mouse Orthologues:

Foxr1, Foxr2

Mouse Descriptions:

forkhead box R1 Gene [Source:MGI Symbol;Acc:MGI:2685961]
forkhead box R2 Gene [Source:MGI Symbol;Acc:MGI:3511682]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa40575	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa30620	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa40575

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > G

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000019561	Essential Splice Site	146	321	4	6

Genomic Location (Zv9):

Chromosome 5 (position 60151212)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	5	58012830
GRCz11	5	58682539

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GTGGAATGACAGTGTAGCTAGTCTATAATGCATCCCCACTATGTCACCTC[A/G]GCTGACAGATGAAGATGACGCTTCGTCTGTGGATGTGCCAATCTGCCGGA

Long Flanking Sequence:

ATTATTATTATTAATAATATTATTATTATTATGTGGGGACGTAGTGTCGCAGTGGGTAGCGCTGTCACCTCACAAGGAGGTCGCTGGTTCGAGTTCCGGCTGGGTCAGTTGGCATTTCTGTGTGGAGTTTGCATGTTCTCCCTATGTTCACATGCGTTTCCTCCAGGTTTCCCCCACAAGACCAAAGACATGTTGTATAGGTGAATTGGGTAAGCTAAATTGGCTGTATAGTATATGGGTATTTCCCATTGATGGGTTGCAGCTAGAAGGGCATCCGCTGCGTAAAACATTTGCTGGATAAGTTGGCGGTTCATTCCTCTGTGGCGACCACCGATTAATAAAGGGACTAAGCCGAAAAGAAGAGGGACAACTTAATTGTTTTATGTTCCATTCATTTAAAAGCAGTCAAGCTAACTTAATAGGTTGGTTAAGACAACATAAAGGAATTATGTGGAATGACAGTGTAGCTAGTCTATAATGCATCCCCACTATGTCACCTC[A/G]GCTGACAGATGAAGATGACGCTTCGTCTGTGGATGTGCCAATCTGCCGGAAGGTGAAGGGCACTCGTAAGGGAAGGACCCCGAAGGCAAACACTCGTAGGCTGGGTTTGACTCAGAGCCGACGTCTCCAGAGAGCCCTGCAGGACAGCATGAGCCTGAAGAGCGGCGTCTGGCCTCGACCTCCTGTCAACTACTGCATCCTCATCGCCATGGCCCTCAGCAGCAGCCGCAGCGGCAGTCTCAACGTTCAGCAGATCTACAACTTCACCAGGTCTCCGAGCGCTCCATACACAAACACACACATATGCTTACACATAAACACTAAGCTAAGGGGATTCAACAGAGATTCAGGGTACAGTAGAGTGTGTGTGTGTGTGTGTGAATAATAATTGTAGAAAACCTTTCACGTTTTTTATATTTAAATCATTTATTATATTTGTATTTGAATCAAACAATAATCAAAGTTAAGTTAAATCAATTTATTATTATTTCTAATTTGTA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa30620

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000019561	Essential Splice Site	235	321	4	6

Genomic Location (Zv9):

Chromosome 5 (position 60151483)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	5	58013101
GRCz11	5	58682810

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGCAGCCGCAGCGGCAGTCTCAACGTTCAGCAGATCTACAACTTCACCAG[G/A]TCTCCGAGCGCTCCATACACAAACACACACATATGCTTACACATAAACAC

Long Flanking Sequence:

CATCCGCTGCGTAAAACATTTGCTGGATAAGTTGGCGGTTCATTCCTCTGTGGCGACCACCGATTAATAAAGGGACTAAGCCGAAAAGAAGAGGGACAACTTAATTGTTTTATGTTCCATTCATTTAAAAGCAGTCAAGCTAACTTAATAGGTTGGTTAAGACAACATAAAGGAATTATGTGGAATGACAGTGTAGCTAGTCTATAATGCATCCCCACTATGTCACCTCAGCTGACAGATGAAGATGACGCTTCGTCTGTGGATGTGCCAATCTGCCGGAAGGTGAAGGGCACTCGTAAGGGAAGGACCCCGAAGGCAAACACTCGTAGGCTGGGTTTGACTCAGAGCCGACGTCTCCAGAGAGCCCTGCAGGACAGCATGAGCCTGAAGAGCGGCGTCTGGCCTCGACCTCCTGTCAACTACTGCATCCTCATCGCCATGGCCCTCAGCAGCAGCCGCAGCGGCAGTCTCAACGTTCAGCAGATCTACAACTTCACCAG[G/A]TCTCCGAGCGCTCCATACACAAACACACACATATGCTTACACATAAACACTAAGCTAAGGGGATTCAACAGAGATTCAGGGTACAGTAGAGTGTGTGTGTGTGTGTGTGAATAATAATTGTAGAAAACCTTTCACGTTTTTTATATTTAAATCATTTATTATATTTGTATTTGAATCAAACAATAATCAAAGTTAAGTTAAATCAATTTATTATTATTTCTAATTTGTAAAATATGTTGTTGTTGTAGTTTATTCAATTGTTTGTACTTTTATGTATTTTTAAATAATTTGCCATTTAAGCATTTTAATTGGTCCCCCAATTAATATAATATAATATTACAATATTTAATATTTATTATAATGTTTCATATTATAATAAAATAAAAAATAAAAACTCAATCTTTTGAAAAGAATGAAATGTGTACATTATAATTAATAAATTTACTTTAGATTTTACTTTATTAATGTTCTTTTTTATATTTATGTTAATATATTTAATA

Associated Phenotype:

Not determined