Busch Lab

ZMP

zgc:103518

Ensembl ID:
ENSDARG00000021380
ZFIN ID:
ZDB-GENE-041114-27
Description:
protein phosphatase 1D [Source:RefSeq peptide;Acc:NP_001007341]
Human Orthologue:
PPM1D
Human Description:
protein phosphatase, Mg2+/Mn2+ dependent, 1D [Source:HGNC Symbol;Acc:9277]
Mouse Orthologue:
Ppm1d
Mouse Description:
protein phosphatase 1D magnesium-dependent, delta isoform Gene [Source:MGI Symbol;Acc:MGI:1858214]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa20543 Nonsense Available for shipment Available now
sa12778 Nonsense Available for shipment Available now
sa40569 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa20543
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000014028 Nonsense 40 534 1 6
Genomic Location (Zv9):
Chromosome 5 (position 58333742)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 56254341
GRCz11 5 56924558
KASP Assay ID:
2259-6593.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGAGGATTTAACGGAGGTGATCGTGGAGCTGGAACCCACCGAAGATGAGT[T/A]GCAGGCGGCGGGACACGCTGATCCAAAGCCGGACCAAGAGCCGGTCTCTG
Long Flanking Sequence:
CTAATAAAGTGACCGGTGAGTGTACAGTATGCTAGCATTCATTAATAAAGTTTTGTAAATATTATACATAGCTTACAGTAGACTTTACTACAGTATGGTTCAAAAACGTTGTATTTTTCATGTGGGATTGGACATTAAGCAAGTTTTCGACAAGTTCCTGAGAGTTCTTCCGGGCTGTCGCACACGAACCTCCTGCCCAAGAGATGGCGCTAGTGACCTTTCTGAATCCATCACTGTGTGTCTGCGAGGGAAGGAAGGACTAGGAGCTTAGGAAATAAACAAAAGACGATCTCAGATAAATAAATGTTTTTAAGGTTAACCAAAACAGTTTAAATAACGCGTTTGCAGAGTTTAGGTTGATTTGCACTAAAGGAAGGTCCGAATGGATATGAATTGCGACCTATCGCTGCGAGTGAGCGTCTTCTCCGAACAAGGAGGAAGGAAATACATGGAGGATTTAACGGAGGTGATCGTGGAGCTGGAACCCACCGAAGATGAGT[T/A]GCAGGCGGCGGGACACGCTGATCCAAAGCCGGACCAAGAGCCGGTCTCTGATAGCGAACCGCCGGACTGCTCAAACAATCCTTTACCGGTTCTGATAACGTGGAGAAACCCGCTGTCGACCGAGGAGGCTGACGGTACGGATGAGCCTGGGACTCAACCGGCGGCGGCGGACAGCAGGAGATCGGTCGCCTTTTTTGCCGTGTTTGACGGACACGGAGGGCGAGAAGCTGCGATGTTTGCTCGAGATCACCTCTGGGATTTTCTCAAGAAGCAGCGGGGATTCTGGTCTAAGGATTACCGGAAGGTTTGTTCCGCAATTCGGAAGGGCTTTATCGCATGTCATCACGCGATGTGGAAAAAGCTTCGTAAGTCAATTCAACACCATTACACGCATATCAATTCAACAAAATCACACTCTTGTCAATTTAACACTATTACACTCGTATCCATACACCCGTGTGAACAACGTGACGTTTCCCGATATTGTGATTAGCTCCGAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12778
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000014028 Nonsense 208 534 2 6
Genomic Location (Zv9):
Chromosome 5 (position 58331004)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 56251603
GRCz11 5 56921820
KASP Assay ID:
2259-6592.1 (used for ordering genotyping assays)
KASP Sequence:
GGCTCATGTTGGGGAYTCATCTGTGGTTCTGGGCGTGAGGGAGGACCCCT[C/A]GGATAAGGTCATCAAAGCTGTGGAGGTCACTCAAGACCACAAGCCCGAGC
Long Flanking Sequence:
AGGTTTTATACCTTGACTTCTCCAAACCTTATCATCCCATGCCTACCTATAATAATCACTTGCTATTAAATGAAAAGGATAATTATGAGAATTTATAAATCTTCATGTACACACTAGTGACATCTGCTGGTAAAAACCGTGTAAATACGAGAAAAATGAGGCACTCTGCAGAGTGATGATTTTCAATAAAACGTAATCTCCATTATCATAAACTAAAAATAAATATTAATCTCTCATTATTATGAGATGTTAGTTTAATGTTATGTGAATGTTCCTCATTACTGTGACTTGTAGAATGTTTTTTTTCCCCCTGCAGCCATAAATAGTAGTAAGTAGTAGTTTACCATGTGTCTATTCTTCAGCTGAATGGCCCAAGACTTTAACTGGTCTCCCCAGTACTTCGGGCACTACAGCCAGTGTGGTGGTCATCAGAGGGGACCATATGTTTGTGGCTCATGTTGGGGATTCATCTGTGGTTCTGGGCGTGAGGGAGGACCCCT[C/A]GGATAAGGTCATCAAAGCTGTGGAGGTCACTCAAGACCACAAGCCCGAGCTCCCAAAAGAGAAGCAGAGAATTGAGGGACTGGGAGGAAGGTGAGAAGTTTGAAACCTCTGCACTTTAGTTTGAAGTTATCATAATTGATGTCTTTAAGAGACAGTTCACCCAAAAATGACACTTCTGTCATTGTTTTCATTACACATTACTTATTCCAAACCTTTTTGAGTGTCTTTTTTTCTGTTGAACACAAAAGAAGTTATTTTGAAGAATGTTGGATTGTTTTTTTTCCTTTTTTATGGATCTTAATCTCGTATAAATCTACCAAGTTTCATAAAAAAAGTAAAAATATCCGTCTATTTTGTGTTCAGCAGAAAAAAAAATCCATTAACGTTTGCAAACACTCAAGGGTGAGTAAACAGTGATTGATTTTCCTTTTTTTTTGTGAACTATTCCTTTAACGTGCTGTCGTAAAACACACCAACTGACCACTATTGTATTTCATACA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40569
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000014028 Nonsense 252 534 3 6
Genomic Location (Zv9):
Chromosome 5 (position 58330424)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 56251023
GRCz11 5 56921240
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGACTGTAGTGTGGTGAAGAAGTCTGGTGTGAACCGTGTGGTGTGGAAA[C/T]GACCTAGGCTAAGTCACAATGGACCGGTCAGGAGGAGCACCCCAATCGAT
Long Flanking Sequence:
CTGGGAGGAAGGTGAGAAGTTTGAAACCTCTGCACTTTAGTTTGAAGTTATCATAATTGATGTCTTTAAGAGACAGTTCACCCAAAAATGACACTTCTGTCATTGTTTTCATTACACATTACTTATTCCAAACCTTTTTGAGTGTCTTTTTTTCTGTTGAACACAAAAGAAGTTATTTTGAAGAATGTTGGATTGTTTTTTTTCCTTTTTTATGGATCTTAATCTCGTATAAATCTACCAAGTTTCATAAAAAAAGTAAAAATATCCGTCTATTTTGTGTTCAGCAGAAAAAAAAATCCATTAACGTTTGCAAACACTCAAGGGTGAGTAAACAGTGATTGATTTTCCTTTTTTTTTGTGAACTATTCCTTTAACGTGCTGTCGTAAAACACACCAACTGACCACTATTGTATTTCATACACCCAATTAATTAATTTTATTGTTTTGTGTTTGACTGTAGTGTGGTGAAGAAGTCTGGTGTGAACCGTGTGGTGTGGAAA[C/T]GACCTAGGCTAAGTCACAATGGACCGGTCAGGAGGAGCACCCCAATCGATCAGATCCCCTTTCTCGCTGTTGCCAGGGCTCTGGGTAAACACTCTATTACACTGTATCCCAGCTATAATAAATATGGAGTATTAAGTGATCTGTACTGACTTTAGTTCTCATTAAAATGGCAATAACCTTTTCATAAAGGGTAGCAAACTTAAATAATTAAATTCAGCCATCTTTTACTCACTTTTCACTTGTTCCAAAGTGGCTGTTAGTTTCAAACACTAACCTACCACAGCCATATCACCCAGCAGCCCAAGACTGGTAACTCGCTGAAGCTTAGCAGGGCTAAGTCTGGTTAGTATCTGGATGGAAGACCACATAGGAAAACTAGGTTGCTGTTGAAAGTAGTGTTAGTGAGGTCAGCAGGGGCGCTTAACTGATTGGTGGGGTTTAGGAACAAATTAATTGCTGAACAAATCATATGGGAGTCGTTGGGATAATTAGGTAAAAAT
Associated Phenotype:
Not determined