ZMP
thbs4a
Ensembl ID:
ZFIN ID:
Description:
thrombospondin 4a [Source:RefSeq peptide;Acc:NP_001107896]
Human Orthologue:
THBS4
Human Description:
thrombospondin 4 [Source:HGNC Symbol;Acc:11788]
Mouse Orthologue:
Thbs4
Mouse Description:
thrombospondin 4 Gene [Source:MGI Symbol;Acc:MGI:1101779]
Alleles
There are 5 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa20531 | Nonsense | Available for shipment | Available now |
| sa33716 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa40558 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa44617 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa2199 | Essential Splice Site | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa20531
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000051005 | Nonsense | 517 | 944 | 14 | 22 |
Genomic Location (Zv9):
Chromosome 5 (position 54744287)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 51279181 |
| GRCz11 | 5 | 51925774 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAGATGAGAAGCTTACATAACTGTCTATATTCCTACAGGACAACTGCTG[G/A]CTGACGCCTAACATAGACCAGAAAAACAGTGATAAAGATCTGCATGGTGA
Long Flanking Sequence:
TCATGTGATGCAATTTTGCAGGTCAGAGTTCACCAAGCTTGAACTTTGCAATGCAGCGAACTGCGAAACTTGTCGCACAAGCTTGTGTTTCGGGTCTGACACATTCGTGTGCGTGTGAATAGAAGTCTATGGGTCAAAAAGTCCAGTGTGACGCGGCTAAAATAAATATATCACATAGAGAGTGAGTGTACGTAGAAATAAACATTATTCAAGGAAACAAAATTTTGTTATTTCTGGTATTGTATGAAGACGAAACCATATTGTAAAGTGTTGCTAGCTTATCTCACTTTTTATTTTTCAGGATAACTGCATGTTTGTTCCCAACTCTGGCCAAGAAGACGCTGACAGGGATGGGAAGGGAGACGCGTGTGATGAGGATGCAGATAGTGATGGCATACTTAATGATCAGGCACAGATGGAACAAATCTTTCTTATAAACAAATCTTTCCTTCAGATGAGAAGCTTACATAACTGTCTATATTCCTACAGGACAACTGCTG[G/A]CTGACGCCTAACATAGACCAGAAAAACAGTGATAAAGATCTGCATGGTGACGCATGTGATAACTGCATAGAAATCAAGAACCCGGACCAGCGTGACACAGACAATGATGGACTGGGAGACGCCTGTGATGATGACATAGACGGGGACGGTAATTTCAGATTAATTCACCATCAAGCTTTTTTTTTTCTGTTGAGCACAAAAGAATAAATATTCAAGAAAGTAGTAACCAGACAGTTGATGATATATTGACTTCTATTAATCAGGTTTCTAACAATTATCAAAATACTGTATCTTCAACTGAGTTTGTTCTAAGATCTGAGAAAAGTTTGGAACAAACTAAAGGGATTGCTAAAGGGAAACTAAAATGATCTCTTTAATCAAAGTCCCTTTAAGGCAAGTAATTTCACTTGGCAGCCATCTTTGAAATGCCTCTTGGGCAGTATGATCAGGCATTTTGTTTGAATGGGGAAACATCAAATTCTCCAAAACTACTTGCCAAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33716
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000051005 | Essential Splice Site | 761 | 944 | 19 | 22 |
Genomic Location (Zv9):
Chromosome 5 (position 54753497)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 51288391 |
| GRCz11 | 5 | 51934984 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AATGAAAGTGTTGTTGTTGGGATGAGTGATGGAATCTTATCACTCCAAAC[A/T]GGATACACTGCATTCAATGGTGTGGACTTTGAGGGCACCTTTCACGTAAA
Long Flanking Sequence:
TCCATCACTAAACTGTTGATTAAAGTTATTATTTTCATTTTAGATCCGCACAAAAGTATTCTTGTAAGCATGATCATTTTCTGTTTAAACCACTGAAGGCATATAGTCTGTTTTTAAGATTTAACAGTATGTGAACTTGTGTGTTGCTTTTGACAACCTCATTTCTACTTGACATTGACATAAAACAAAGCTTAGTTTAAAACTCATTCAATTTGCCATCTTTTTGTTCTTTTTGTCTCTCATTTAACTTGACAAGGCTTTGAAACACATGCAGATGCTTTATTCGTATCTGTTACAATATAAATTATAAAGATTTTTACAATGTTTTACAGAGTAAAACTCCAGTTGGCAGAAATGATGCTTTGTAGATGAGAAAGTCTAAAATGATTTCTCTCTTACACACACATACCTATCCTTAACTTGCACTATGAAGTCACTGTTTCACATGAGAATGAAAGTGTTGTTGTTGGGATGAGTGATGGAATCTTATCACTCCAAAC[A/T]GGATACACTGCATTCAATGGTGTGGACTTTGAGGGCACCTTTCACGTAAACACAGTGACGGATGATGACTATGCAGGCTTCATCTTCAGCTATCAGGACTCCTCCAGCTTCTATGTGGTGATGTGGAAGCAGACGGAGCAGACGTACTGGCAGGCAGTGCCCTTCAGAGCTGTGGCAGAGCCTGGCATTCAGCTTAAGGTTCCTGTATTGTTCATCTCTATTACTGTCTGAATGCTCCATGTGTGCTTTTATCATTACAGCTGCTCCGCTGAGCCCACAGCAGACCTAGAATTAAGACTTTGGCCAAAATCTGAAGCATGCAAAAATACTTAAGACGCTGAAGGCAAAAACACAGCTTTTTTTATTCAAGCAATTGTCTGTTTTCAGATTTTGGGCCTTTTGGCCATTTCAGTTTAAGGTAGAGAAAACATGCAAAGTAATCTTTTAATTGTTTTTTATGTCACCCTTTATTAGTTGGCATCTGTAGATTTCAATAATAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa40558
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000051005 | Essential Splice Site | 884 | 944 | 21 | 22 |
Genomic Location (Zv9):
Chromosome 5 (position 54757184)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 51292078 |
| GRCz11 | 5 | 51938671 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTAGTTCACTAAAGTATTATACATATTTAGTCATCTTTGTTTGTTAACA[G/T]GGTGCAGTTCTATGAAGGCACTGACCTGGTAGCAGATTCTGGAGTGGTTA
Long Flanking Sequence:
TATAAATTTGCAACGATTTAAAAAAAGCTCTTTTTTCACATTGTCATTACGGGGTATTGAGAGTAGAACTTTGAGGAAATAAATGAATTTAATTCATTTTGGAATACGGCTATTCACCTGCAGTGTTTTGCTTAAACCAATATTAAAGCTGTTATTTTGCTCTTCAAGCATGTCAAAATAAGGATTGATCATTCAAACAAAAGCAGGCACGGGTGAATATATTGTACTTTTCTAGGCTGTAAAGTCTAACACGGGGCCTGGGGAGTTCCTGAGGAACTCGTTGTGGCACACAGGAGATACAAAGGAGCAGGTGCGTCTGCTGTGGAAGGACCCTCGTAATGTAGGCTGGAAGGATAAGGTCTCCTACCGCTGGAATCTGAAGCACAGACCCCAAGTGGGATATATCAGGTTAGATGGAGATGTCTGATTTTACTGGATTTGAATGAGAGGAGTAGTTCACTAAAGTATTATACATATTTAGTCATCTTTGTTTGTTAACA[G/T]GGTGCAGTTCTATGAAGGCACTGACCTGGTAGCAGATTCTGGAGTGGTTATTGACACCAGCATGAGAGGAGGTCGACTCGGGGTCTTCTGCTTCTCACAGGAAAACATAATCTGGTCCAACCTGAGATACCGCTGTAATGGTGAGAGCAATGCTTATTGCAATTACTATTGCACCCAGGGTCGAGACTAGTAATTTTGAACTTAATGAATGAATATTTGAGGTTGAGTTAATATGATTAATACTATTAAAGCAGATCTCCTGGGCCCCCAAAGCACATGGGCCCATAGAATTGTTCTAACTTCCTCCTGCTTAGCGGTGGCCATGGTTAGGGCATACTAGAAAGTTATTGTAATACCATATGGCAAGCATTTTACCATTTATAAGTTAATTCAAAGGTGCACTAAGTGAATTTTGCCAAACTCAGTAAGTTTCATTTTGATATCTGGACAATTGTTACTAGACACGCCCCTTACTGCTGATTGGCTGCAAATGTATTTAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa44617
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000051005 | Nonsense | 909 | 944 | 21 | 22 |
Genomic Location (Zv9):
Chromosome 5 (position 54757258)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 51292152 |
| GRCz11 | 5 | 51938745 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCTGGTAGCAGATTCTGGAGTGGTTATTGACACCAGCATGAGAGGAGGT[C/T]GACTCGGGGTCTTCTGCTTCTCACAGGAAAACATAATCTGGTCCAACCTG
Long Flanking Sequence:
GGAAATAAATGAATTTAATTCATTTTGGAATACGGCTATTCACCTGCAGTGTTTTGCTTAAACCAATATTAAAGCTGTTATTTTGCTCTTCAAGCATGTCAAAATAAGGATTGATCATTCAAACAAAAGCAGGCACGGGTGAATATATTGTACTTTTCTAGGCTGTAAAGTCTAACACGGGGCCTGGGGAGTTCCTGAGGAACTCGTTGTGGCACACAGGAGATACAAAGGAGCAGGTGCGTCTGCTGTGGAAGGACCCTCGTAATGTAGGCTGGAAGGATAAGGTCTCCTACCGCTGGAATCTGAAGCACAGACCCCAAGTGGGATATATCAGGTTAGATGGAGATGTCTGATTTTACTGGATTTGAATGAGAGGAGTAGTTCACTAAAGTATTATACATATTTAGTCATCTTTGTTTGTTAACAGGGTGCAGTTCTATGAAGGCACTGACCTGGTAGCAGATTCTGGAGTGGTTATTGACACCAGCATGAGAGGAGGT[C/T]GACTCGGGGTCTTCTGCTTCTCACAGGAAAACATAATCTGGTCCAACCTGAGATACCGCTGTAATGGTGAGAGCAATGCTTATTGCAATTACTATTGCACCCAGGGTCGAGACTAGTAATTTTGAACTTAATGAATGAATATTTGAGGTTGAGTTAATATGATTAATACTATTAAAGCAGATCTCCTGGGCCCCCAAAGCACATGGGCCCATAGAATTGTTCTAACTTCCTCCTGCTTAGCGGTGGCCATGGTTAGGGCATACTAGAAAGTTATTGTAATACCATATGGCAAGCATTTTACCATTTATAAGTTAATTCAAAGGTGCACTAAGTGAATTTTGCCAAACTCAGTAAGTTTCATTTTGATATCTGGACAATTGTTACTAGACACGCCCCTTACTGCTGATTGGCTGCAAATGTATTTAAAAAGTTAGGCCCAATCCCATTTCTATGTTTGTACCCCTACCCCTTGAAAAAGATTGTGAACGGTGGTAGGGCTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2199
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000051005 | Essential Splice Site | 930 | 944 | 21 | 22 |
Genomic Location (Zv9):
Chromosome 5 (position 54757325)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 51292219 |
| GRCz11 | 5 | 51938812 |
KASP Assay ID:
554-2493.1 (used for ordering genotyping assays)
KASP Sequence:
CTTCTCACAGGAAAACATAATCTGGTCCAACCTGAGATAYCGCTGTAATG[G/A]TGAGAGCAATGCTTATTGCAATTACKATTGCASCCAGGGTCGAGRCTAGT
Long Flanking Sequence:
ATTAAAGCTGTTATTTTGCTCTTCAAGCATGTCAAAATAAGGATTGATCATTCAAACAAAAGCAGGCACGGGTGAATATATTGTACTTTTCTAGGCTGTAAAGTCTAACACGGGGCCTGGGGAGTTCCTGAGGAACTCGTTGTGGCACACAGGAGATACAAAGGAGCAGGTGCGTCTGCTGTGGAAGGACCCTCGTAATGTAGGCTGGAAGGATAAGGTCTCCTACCGCTGGAATCTGAAGCACAGACCCCAAGTGGGATATATCAGGTTAGATGGAGATGTCTGATTTTACTGGATTTGAATGAGAGGAGTAGTTCACTAAAGTATTATACATATTTAGTCATCTTTGTTTGTTAACAGGGTGCAGTTCTATGAAGGCACTGACCTGGTAGCAGATTCTGGAGTGGTTATTGACACCAGCATGAGAGGAGGTCGACTCGGGGTCTTCTGCTTCTCACAGGAAAACATAATCTGGTCCAACCTGAGATACCGCTGTAATG[G/A]TGAGAGCAATGCTTATTGCAATTACTATTGCACCCAGGGTCGAGACTAGTAATTTTGAACTTAATGAATGAATATTTGAGGTTGAGTTAATATGATTAATACTATTAAAGCAGATCTCCTGGGCCCCCAAAGCACATGGGCCCATAGAATTGTTCTAACTTCCTCCTGCTTAGCGGTGGCCATGGTTAGGGCATACTAGAAAGTTATTGTAATACCATATGGCAAGCATTTTACCATTTATAAGTTAATTCAAAGGTGCACTAAGTGAATTTTGCCAAACTCAGTAAGTTTCATTTTGATATCTGGACAATTGTTACTAGACACGCCCCTTACTGCTGATTGGCTGCAAATGTATTTAAAAAGTTAGGCCCAATCCCATTTCTATGTTTGTACCCCTACCCCTTGAAAAAGATTGTGAACGGTGGTAGGGCTTCAAAATTTAACCCTAATAAATGGTACAGCCCTACAACACCTGCACATGCTATCATATGTCTTCACAA
Associated Phenotype:
Not determined