Busch Lab

ZMP

ncor1

Ensembl ID:
ENSDARG00000035285
ZFIN ID:
ZDB-GENE-040426-993
Description:
nuclear receptor corepressor 1 [Source:RefSeq peptide;Acc:NP_956570]
Human Orthologues:
AC144838.1, AL391119.1, NCOR1
Human Descriptions:
Putative nuclear receptor corepressor 1-like protein C20orf191 [Source:UniProtKB/Swiss-Prot;Acc:Q9H4
Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:A6NGY8]
nuclear receptor corepressor 1 [Source:HGNC Symbol;Acc:7672]
Mouse Orthologue:
Ncor1
Mouse Description:
nuclear receptor co-repressor 1 Gene [Source:MGI Symbol;Acc:MGI:1349717]

Alleles

There are 13 alleles of this gene:

Allele Name Consequence Status Availability
sa18033 Nonsense Available for shipment Available now
sa17067 Nonsense Available for shipment Available now
sa20512 Essential Splice Site Available for shipment Available now
sa13384 Nonsense Available for shipment Available now
sa13203 Nonsense Available for shipment Available now
sa17231 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa18033
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
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Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000097574 Nonsense 492 2409 15 48
ENSDART00000143573 Nonsense 454 2398 14 47
Genomic Location (Zv9):
Chromosome 5 (position 43553265)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 41334530
GRCz11 5 41934683
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAGGTCAKCTGTCTAAATGCTTCTGGTATTGTGCTTCTTTTCTTKAAAAG[C/T]AGATAACACGACCTTCACAGGAAGAGAAGACAGAAGACAAGAACGAAGAG
Long Flanking Sequence:
TGGAGCCAACGCACACCTCCCACTAGTGCCAGTATATCGCACTGCTACTCGTGCTGTATTTAAATGTGCGTATATATGTAAATGTGTATATGTATGCGTGTGTGTCCAAAATGGTTTACCTTCATAGCTTCTAACCTGATATTTAATGCTCTGTAAATCTATAAATGACCGTCTGTAATTCTTGCCGGATTTCCAGTTTATTTAGATTCTAATCATCATTCATTTTAAGAAAATTCAGTGAACAAGGTACATTTAAAAGTGAGCTTAATAAATGTAACTTAGATATTTATTTTTGTTAAATATTTGTTTTCCTTGATTTAAAGGAACTAGCGATATTGCCCATTTGATGCTTGATGGTGTGTGTAATCAATCCTTCTTAGCTGGTCTGACACAAATAAAGGTGAAATGTTTTTTGTGATGGGAACCTGGTCACAGATCTGTGCTCTTGAAAAGGTCAGCTGTCTAAATGCTTCTGGTATTGTGCTTCTTTTCTTTAAAAG[C/T]AGATAACACGACCTTCACAGGAAGAGAAGACAGAAGACAAGAACGAAGAGGACAAATCCGAGAAAACCGAGAAGAAAGAGGACGAGGAGAAAAAGGAAGAGGAGGAGAAAGATGAAAAAGAGGACTCTAAGTAAGTCTCATGATTTTCCCCTCTTGCTTTGAACTGGCCTCACTTCACCCTATTGCCCCAACTCCACTGTGAAATCCCTGAGCCACACACACACACACACACACACAATAATCTGTTGAGAGCGATATCAGCACAGTTATTGGTCTGTTGAAACGATGTGGGATTCACTCTTAAGTTGCAGTGTTTGCAAAAAATGTTTCTCTTAATTCAGAAAGAGCCCAGACGATGAAGAGCAAACAGATATATTGGATTGCTCTCTCAATGAGAATGCAGTAGGTTAAAGTAGGTGAGATGATCTGGTTTCTGTGAGGTGAGCCTTATTGTAACAGAGGCTTAAGATTAACCTCATTAACTCATTTGCTCTGGAGGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17067
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
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Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000097574 Nonsense 1071 2409 25 48
ENSDART00000143573 Nonsense 1060 2398 24 47
Genomic Location (Zv9):
Chromosome 5 (position 43522163)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 41303428
GRCz11 5 41903581
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGCACAGGCCGCCAAACATTCCCTCTCCTCCACCCCTCATTCACACCTCC[A/T]AACCYACAGACAAGCCCTCCTTCATTCAAGGCGGCTCCATTTCGCAGGTA
Long Flanking Sequence:
GTTGAAGATGAAAGAAGGTTGACAGATAAAAATCCTAGGTGATTTAACTAAAGTAATGAGGAAGTATGAGTGTCTGTTTTACTCTTGTCTGTTAAATAGTGGATTAGAGGTTTGCCACCTTGTGGAGAAACGAGTCAAATCACATTTGCAAGCTGAGCATACGGAGTAAACATGGTTAAAAAAAAAAACAGTTTGTTGTTTTTCCACACTGTAATGACTTTTTAAGTTATGCCACATGCATTGTGCACATTCCCAAGCATTGCACTTTTAAACTAAATTACATTTAGGCTTTAGAGAGAAAGACTTGTCAGCTGTGGGGATAAAGAGTGATCCTCTTTTGCCCGCCTCCTTTCATCCCTTGTTCTTCTTATCCTTTCATTCCCACAGTTCTTCAGCCGGCACCAAACCAGGCAGTCCAGACTGTTTCAGATGTCCGCATGACGTTCTCTCGGCACAGGCCGCCAAACATTCCCTCTCCTCCACCCCTCATTCACACCTCC[A/T]AACCCACAGACAAGCCCTCCTTCATTCAAGGCGGCTCCATTTCGCAGGTAAGAGAATCAGTTTTTTGTTGTTGTTGTTTTTTTCTCTCAGTTCGACTTTTATAACAGTGATTTCTCATCCATGGATAATGTTTTTAGCTTCTTCAGGCTGTTAGTTGTTATTTAAGACTCGTGGTGCTTCTGCTGAGTTTAAATGCTTCCTTCATCTAATGGGATCAAGGCAGGGGATCAGGGGTTTTCCTGGTATTCAGTTCTGAAATGCTGTTTTCTTCTCACCATGTCCTGCAGGGTACGCCAGGAACATACCTTCCTCCTCAATCACACGCGGTGTACATACCCGAGGTGGTCAAGACCACAGGAGGGTCAATCTCACTCGGCTTGCCAAGACAGCAAGACCCTGCCAAACCTGGTGAGAGAGAGAGATTTGAGAGTATAAATAAACAGTCGAGCTCAGCTGAATGAAACACAATCCTTCCAAGTGCTTGTTTTGGTCGAGTTATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20512
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
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Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000097574 Essential Splice Site 1310 2409 31 48
ENSDART00000143573 Essential Splice Site 1299 2398 30 47
Genomic Location (Zv9):
Chromosome 5 (position 43518932)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 41300197
GRCz11 5 41900350
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCACATGAGTCGAAGGATCGACCCATGCTTGCAGGATCCATAATGCAAGG[T/C]AATTTGTGGACCCATTTTGAAAATTCATATTGTATTTTTTTTAAAAAAGA
Long Flanking Sequence:
GACAGATTTTGAAAATGTGCTTTACTTTAAAGGCTAAATTACATGTTTGTTAGCAGTGTGACAAGGGCAGTCGCTATTTTTATAGAGCGCCACAGCAAGATGTTAGCCAGGAGTCTTTTGGACATGGTCTGTTGGTATTTTTAGTTCATATTATTATAATAATATGTCTCTCTCATTTTGTATTCCCACAGCCATTAAGAACCCTAGAGAGGGCACAAGAAGCCCACGTATGGGGCACGATCTTAAGCGCACATATGACATCATGGAGGGATCACGGGGACACACACCACGTGAGACTACACCTTATGAAGGTTAGTCACATTTTCATTTTCTTTCTAATTAAAAGAATAATGAGGCACAAAAAAAAGTTGAAGATGCTTGCAAGGAAGAAATGTTTTCACGAGTTGTTTCTGTCTGCCAGGTTTGATTTGCAGAACATTGAGGGAAAGTCCACATGAGTCGAAGGATCGACCCATGCTTGCAGGATCCATAATGCAAGG[T/C]AATTTGTGGACCCATTTTGAAAATTCATATTGTATTTTTTTTAAAAAAGAAAAAAGTTTGCTTAAAGATGTTGTTTCTCAGTAAATGTTTACTACATCATGCTCAGTTTTTCCTCTGTTTCAGGAACACCAAGAGCCTCTACTGAAGTCTATGATGAAGCCTCCAAATATGGTAAACAGATCAAGAGGGAGAGTCCACCCATACGCTCTTTTGAAGGTGGCATCACAAAGGGTAAACCATATGAAGGTGTTAACACCATAAAGGAAATGGGCCGCTCTATTCATGAAATCCCCCGCAAGGAAACCCAAGATAGCCGCAAAACTCCTGTTTTAGAAGGTTCTATTACTCAGGTACGACCTTTACAGTTGTTGTTATTTTCTGCACTGTGATTTGTCTGAGTAACATTTACACTACCGGTCAAAAGTTTGGGGTTAGTCTGATTTTAAAATAAGCTTCTCCTGCTCACCAAGGCTGAATTTATTTCATTCAAAATACAGTAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13384
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
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Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000097574 Nonsense 1610 2409 35 48
ENSDART00000143573 Nonsense 1599 2398 34 47
Genomic Location (Zv9):
Chromosome 5 (position 43514973)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 41296238
GRCz11 5 41896391
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATACCATGGARAACACTCGGCAAACCATCCTAAACGATTACATMACGTCA[C/T]AACAGATGCAGGTCATACCACGGCCTGATCTCGCAAGGGGACTATCGCCA
Long Flanking Sequence:
GTAGTAGTCCTGTGTGAACAGAATAGCAGCTCTAGTACATGTTTATTTGTGGATGAAATATCTCTTTAATTAGCCTCAGCAAACACAAGTGGGTACTCTTGCCTGGGTCTGGAAAATTTGTGAATTATGAATTAGTTCTGTTCAAACAGGCCTGCAGGAAAAACAGTTCATGCGTCATGCACAAAATTGATTGATGCTCTGAATAATGACTCTCTCTAAAAGCACTACTTCTGTCTCATTTGTAAACATCATGTTTTGGTTTTTCATGCATTTGATAATGGCACTTCCTGGTTGACTCTCCACTACTGTGGCAAACCTGCACTATTGACGTCAAGACAAGAACAGCTGTCTTTTCACCTGTCATTGTTGTTTTTCCTCTGTATATCGCAGCAGCGTATATGTTCCCACGGCAACCATCGCCAACTGGATACCCCAACACTTACCAGCTGTATACCATGGAAAACACTCGGCAAACCATCCTAAACGATTACATCACGTCA[C/T]AACAGATGCAGGTCATACCACGGCCTGATCTCGCAAGGGGACTATCGCCACGTGAACAGTCTATTGCCATCCCGTACCCGCCACCTAGAGGTAAAGGGCATGATTGTCTGAGAATGTGTGTGTGTGTATGTTTGTAAAAGTGAATGAAAGGATCAAAGAAAGAATGTGGTGTTTGGATACCGTGTTTGTGTGAACAAGTGGCAACCTTTTCCAGACCACCAGAAGCAAATGACCCTAAAGCAAATTGTGTCAGTTCACAGAGTTCAAAACTATTTTAAATCCAGGGCTGGGGCTGTTTCTCACATGTCCATGATACCTGTCTATAAAGAGGCCTGCAGGTTTTGTTGTTTGTTTGTTTGTTTGTTGCAAGATCACTCTTCACCCCATTGTAACTCAAGTAACATCATTCATTTTACTGGGCAAATTAACCTAGGTCTTAGAAGACATAATGTTACACAAATGAGAGGATGGCTTTAAAGCAAGAGCATGATTTAGGCTAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13203
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
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Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000097574 Nonsense 1741 2409 38 48
ENSDART00000143573 Nonsense 1730 2398 37 47
Genomic Location (Zv9):
Chromosome 5 (position 43510034)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 41291299
GRCz11 5 41891452
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTCYTCCAGCATTTTCAAGACATGACACTTTTYTCTTTCAGGTCCCGAG[C/T]AGCCTGTTCGACCAGGCAGCCGTAGTTTCCTGCGCTCCACCTCTCCATCT
Long Flanking Sequence:
TTTATATATTTTTTTGGACTAAACCAAGACTATGCAGCTTGCAGTTTTTCCCACTCGCATGAACCAGCACCATTTGTGCAAAAGGGGTCAAATCAAAATTGCTAATGTGTGTTAACAAGAATGGCACCATGAATGGATTAATGCTTGAGGTTTACTGTGAATCTGTCAGCTGGCCCTGTCAAACTACAGCAAGTGAAATGAGCTGGTTTGCTTGTAACTCCACACTGTTTGTTTTTGTGTGTTGCCTGTTCTTCGCTCCCTGCAGGACATCCGGCTCATCACAGTGCCGCTGCAGCCATAGTGGAGCGGGAGACTCAGAGAGAAAAGGAGCGCGAGAGGGAAAGGGAAAGAGAGCGAGAAAGAGAGCAGAGAGAACGGGAGCGTGCAGCAGTAGAATATATGCGTGGGGGTAAGATTATTCAACAGGTGTAACAATAGTTAAACTACTCATTTCTTCCAGCATTTTCAAGACATGACACTTTTCTCTTTCAGGTCCCGAG[C/T]AGCCTGTTCGACCAGGCAGCCGTAGTTTCCTGCGCTCCACCTCTCCATCTGTAAGGGCACAGGAAGGTGTCCTCCAGCAGCGGCCGAGCATCTTTCAGGGCACTAACTCCAAAAGCGTCATTACCCCACTCATGTGAGTAATATGCTAATCATTTATGAAAATTATACTTGACCTGTTAAATAAAAGTATGAAAAAAGCAAGTTTGGATGTAAAGGACATAAGGGATGTAAATGACTGAAAAAAGCAGCGGGTGAAGTATATTGATCACAAGTGCTTAGTTTGTGATCATATCTCTGCTTTTGTTTAGTTGATATGTTATCCAAATATTCAGAGCTTGAAACTAAAGGACATGTGACTGGATTGTGCTGCTTTTAATGCCCCTCACACAGCTTGATCCACGCTGGCATTTTCCCCCTTGGGTTTTAGGTTTTCATTCAAACTTTTAGAATACCGGTGTCAGATTTGCACAATCCATATGCACAACGCTGGCAGACCTCCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17231
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000097574 Nonsense 2009 2409 41 48
ENSDART00000143573 Nonsense 1998 2398 40 47
Genomic Location (Zv9):
Chromosome 5 (position 43504372)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 41285637
GRCz11 5 41885790
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GACAGCCCGGGGATTCAGGACCATCTGCACCCCAGCCGCCCCCCTCCTCA[C/T]AATCAGACAGTTATGGCTCTGTCCCWAAAACACACCGCATCATGACYCTC
Long Flanking Sequence:
ATGCAGTCTGAACTTGGCATTAGAAACACCGACCGGATGCATTTTTAAACCTCAAAAAGGCTGCCAATCTCTTTGAGTACATGAGACTGTATGAGGAAGTGTTGTTGACAGTTCTCCTGCACACGCAATGAACAGTACGAAATTTGTAGGGCGAGAGAAGATTTTCCACTGGTTAATCGAACGCTGATGTTTAGTTATGTCAGCCAAATACAAAAAAGTTTTAAAGGATAATAATATTGGTCAAAAAAATCAAATATGATTGGGCAGCCTTAATATACCTGGGTGATCTGCCCAAGTAAAGTCTATGTGTGGAAAGCACTGTAAATATAAATAAGCTAGCGCTTTTTCTCAGATGTTTTTTGCATTGAAAAAGCCTAGACAGATTTACCATTGTGTAATAATTTTTTTACCTGATCTTTTATTTTGCAGGAATGTCATTTGGCCGGTACAGACAGCCCGGGGATTCAGGACCATCTGCACCCCAGCCGCCCCCCTCCTCA[C/T]AATCAGACAGTTATGGCTCTGTCCCAAAAACACACCGCATCATGACCCTCGCTGACCACATTTCGGTAAGACACACTCAAACTCCTGATGCTTTATCACAGATCCTGCTTCCTCTAATTCCCTCATCTCTCTCTCGCAGCATATCATTACCCAGGACTTTGCCAAGAGCCAGGACACTCCCCCATCGTCCACTTCACTGCCTTCCTCCTCTTCCTCGCTCTCCTCCACATTCCAGAGCTCTGGTGTTGGAGGTGGTGTGGGTCGAGTAAAAGCCCTGAACCGCTACAGCCCAGAAAACCCAACTTCTGCTCACCATCAGAGACCAGCAAGAGTATCTCCTGAAAACTCTTCCGATAAATCAAGAGCCAGGTAAAAATGCACTGTTTGTAAAAACATTTAAAGGGATAATTGGCCCAAAAACAATGAGGTGTGCACACTTAAGGGATTCCAATCCTCAATGAGTTTCTTACATCTGTTGAAAACAGAAAGATTTTAAAGAA
Associated Phenotype:
Not determined