Busch Lab

ZMP

taf1

Ensembl ID:
ENSDARG00000035330
ZFIN ID:
ZDB-GENE-030131-5576
Description:
transcription initiation factor TFIID subunit 1 [Source:RefSeq peptide;Acc:NP_001038250]
Human Orthologues:
TAF1, TAF1L
Human Descriptions:
TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like [Source:HGNC S
TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa [Source:HGNC Symbol
Mouse Orthologue:
Taf1
Mouse Description:
TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor Gene [Source:MGI Symbol;Acc

Alleles

There are 14 alleles of this gene:

Allele Name Consequence Status Availability
sa20476 Nonsense Available for shipment Available now
sa10523 Essential Splice Site Available for shipment Available now
sa20475 Nonsense Available for shipment Available now
sa1937 Essential Splice Site Available for shipment Available now
sa15367 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa20476
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000051196 Nonsense 52 1947 3 40
ENSDART00000123402 Nonsense 52 587 3 13
ENSDART00000126927 Nonsense 52 369 3 10
ENSDART00000130225 Nonsense 52 1910 2 43
Genomic Location (Zv9):
Chromosome 5 (position 38189781)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 35989465
GRCz11 5 36589618
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATTCTCTCAGGAGTCAAAGAAGCATTTGGCTGGTCTGGGAACGCTGGGTT[T/A]GGGTTCACTCATTACAGAGATCACAGCCAGCGAGGAGGAAACAGCCGAGC
Long Flanking Sequence:
CATAGAAACCTGAGTTTTTTTTTCCTATACATTGTGCAGTATCAAATTCCTTAAAAACAACACTCTCCCAGCAGTTTATACTCTCATCCAGTATCCCGTTTGTCACAAGGAGTATGAATAAACAGTTCCTGAATGAAAATAAAAGTGCCAAATTGCAGTTAAAGTCGACAAATTAAAAAGGAAACACCTGAAATTACATAAAACTCCAGAGAGAATCTGGAAATGAGTGTGGTGATGCAATGACGTTGAGCGATTTATGTGCTATAACATGTAAAATGGGATCATGAAACGAACATTTAAAAAGCAACTCATGTAAACACGTAAATCATATAAGTGTCTTATTCAGATTAGGGTCAATCATTTGATAATGTAAACATAGTCAATGTCAGTGTAAAACCCTTTAGTGGCTAAAAAACATCCAACGTCCATGTTGTGTGATCAACTTGCTCTATTCTCTCAGGAGTCAAAGAAGCATTTGGCTGGTCTGGGAACGCTGGGTT[T/A]GGGTTCACTCATTACAGAGATCACAGCCAGCGAGGAGGAAACAGCCGAGCAAGAGCAAGATCAGAGCAGCACTGACGCAGAAGGTCTGTTATGCCTTGTAATTTTAAGAAGATCTTTTGTAAAATTCACTTTTACACGTTGTTTGAACAGTGAAGTGCGTGTACAGTGTTTGTAAACCAACAGCCTGTAAAGGTAGAAAAACTGCACCCTTTTTTGTTTTATTTTATTTTTAAATAGGCCATATAAACCATAGTATCTTAACAGACATGTAAAAAATTGCTTCCACTCAAAAATTGGCATCTACAGCCAGGTGTAATATTTTTATTTGCAGCTGAAACTTCTTAGACACGTAATAGGATCACATATAACGTATTAAATATTGTCAAAAGGGGCTCATAATAGAGCTCATTGGTGCTGATGGCCCAGTGGTAAGTGCGCCGACATTAAGGGCAACGGTGCTGCAGGCATCCCAAGTTCAAGTCCCGACTCATGCATCTTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10523
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000051196 Essential Splice Site 793 1947 16 40
ENSDART00000123402 None None 587 None 13
ENSDART00000126927 None None 369 None 10
ENSDART00000130225 Essential Splice Site 785 1910 16 43
Genomic Location (Zv9):
Chromosome 5 (position 38183117)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 35982801
GRCz11 5 36582954
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCACAYTTCACCATTCCTTGGATCATTGCACCCTGGACAGCTGCTACAGG[T/C]AACAYACACAGTTGCACAGTTCTGTCATCCTCTATTTTAAGATCTTGTTT
Long Flanking Sequence:
ATTTATATCATTATAAAATCTTTCTTAGATGCGAGAACAGGAGCGGCAGGCATCAGGTGGAGGGGACATGTTCTTTATGCGCACTGCTCAGGATCTGACAGGCAAAGACGGAGACCTGGTTTTGGCTGAATACAGTGAGGAGTATCCTCCTCTTCACATGCAAGTTGGCATGGCATCTAAGATTAAGAACTATTACAAAAGAGTGAGTCAAATTCACAAGAGACACTAAGAGAATCAGTGCTGACTTATAAGTGACATTTCAGATGGAGTATTCATTTTATTTACATAAATTTGGTTCTGTCTCATTGCTCATATTTATGTCTCAATAATTTTAATTCATGGTCTGGGTTTACGTTTCCAAGTTGATTATAGCACTCAATGTTTCTGACTGTAGAAACCAGGTAAAGACCCAGGCGCACCTGACTGTAAATATGGAGAGACCGTTTACTGCCACACTTCACCATTCCTTGGATCATTGCACCCTGGACAGCTGCTACAGG[T/C]AACATACACAGTTGCACAGTTCTGTCATCCTCTATTTTAAGATCTTGTTTTCTTCATAAAATACTCTTATACTGTAGGAATTTTATTTTACGCTTGTTTTTGTCACAGGCATTTGAAAATAACTTGTTTAGAGCTCCCATATACCTTCATAAGATGCCTGAGACAGATTTCCTCATTATCCGGACGAGGCAGGGTTACTTTATCCGGGAGCTTGTGGACATATTTGTTGTGGGTCAGGAGTGCCCTCTTTATGAGGTGCCAGGGCCCAACTCTAAACGAGCCAACACACACATTCGAGATTTTCTTCAGGTAACTCCATTTCTTGCCTTCTCATTATGTTTTTGCTTGATATTTGTGTAAAGTGTGATTTAAGTGTGGAATATGTAGGACATATTAGCATGAGGCAACTCTTTAGTGTTTGTATTATTTGGAGTATCTACTATATATGCTATTTAGAGTAACGCAGTTATAAATGGGATGTCGGGCCCAGCGTTGAGCCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20475
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000051196 Nonsense 1088 1947 23 40
ENSDART00000123402 None None 587 None 13
ENSDART00000126927 None None 369 None 10
ENSDART00000130225 Nonsense 1080 1910 23 43
Genomic Location (Zv9):
Chromosome 5 (position 38177690)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 35977374
GRCz11 5 36577527
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AACTGTCCCGTTGGGAGGTTATCGATGTCGTGAGGACCATGTCTACTGAG[C/T]AGGCTCGTTCAGGGGAAGGACCAATGAGTAAATTTGCTCGTGGGTCTCGA
Long Flanking Sequence:
TGCTGACCCTACCGGGTGTGGAGAGGGATTCTCATATGTTAAAGTCCCTAACAAACCTACGCAGCAGAAGGTGTGTACTGTCTGACCATTTAGCACATCTTGGCAGATTTCAGGTGAATAAAAATATTCCACACCCCCACATTCTCCAACACTCTTGCTTTTTTATGTTTACTCAGGATGATCGAGAGCCTCAGCCAGTAAAAAAGACAGTAACTGGGACTGATGCTGATCTGAGACGCCTATCACTCAAAAATGCCAAGCAGTTGCTTCGCAAGTTTGGGGTTCCTGAAGAAGAGGTGAGACTAACCCAACAAACTAATCAAAGATACAAGATCATAGATATTTCTATTAAATGTATTAAAATTGTATGTTGGTAAGTGTATGGTCTGTTACCTCTAAATGTATTTATTTATTTATATATATTTACTTATGTGTGTGTTTAGATAAAGAAACTGTCCCGTTGGGAGGTTATCGATGTCGTGAGGACCATGTCTACTGAG[C/T]AGGCTCGTTCAGGGGAAGGACCAATGAGTAAATTTGCTCGTGGGTCTCGATTCTCTGTAGCCGAACATCAAGAACGTTACAAAGAGGAGTGCCAGAGGATCTTTGACCTGCAGAACAAGTGAGAACCTCAAAAAACACTGCAGAAGTTTCCTCAATATCACTCTGCACAATCATACTTCACAATGTCTTTGTGATTATGACATTTAGAAAAACAGGAAGGCTTTGTAATATCACAATTGTGATTAAAGGCTGATTTTCGCTTCTGCTTATCGCTTGCATTTAACATTTTGCCTAAACAAAGGGTACCAATGTACAGTTAGGTCCATAAATTTGGGGAAATTGACTCAATTCTAATATTTTTGGCTCTATTCACCAACACAAATATTTTGAAATTCAACAAACAAGATGTTCTGTAACTGCAGATTGTCAGCTTTAATTTGAGCAAAAGCAACCAAAGGGTTTTTGAATGGAAATAAGTGGAATGTTATGCAATGGCCAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1937
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000051196 Essential Splice Site 1621 1947 33 40
ENSDART00000123402 None None 587 None 13
ENSDART00000126927 None None 369 None 10
ENSDART00000130225 Essential Splice Site 1601 1910 34 43
ENSDART00000051196 Essential Splice Site 1621 1947 33 40
ENSDART00000123402 None None 587 None 13
ENSDART00000126927 None None 369 None 10
ENSDART00000130225 Essential Splice Site 1601 1910 34 43
Genomic Location (Zv9):
Chromosome 5 (position 38163536)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 35963220
GRCz11 5 36563373
KASP Assay ID:
554-1925.1 (used for ordering genotyping assays)
KASP Sequence:
CTATTATAAAGTCATCATCAACCCCATGGATCTGGACACACTCCGTAAGG[T/G]CAGGAAGATCTGTGTGTGGACACAGTAAACTTCAGTTGTAGTTTAGGTCA
Long Flanking Sequence:
GACTTCAACTCAAAGTCCTCTGTTTAATATTAATCCATTGAGAATTGTTTTTAGTTACTCATTGCCTACTTTGAACAACAAATAGACATATAACTAATAATGCAAAAAAAATAAACTAGATAAAACCAGTATTTACAAAAAAGAGGAGGTGCTTAATTTAACAGTCTGGAGAGCTAGTGATTAAGATTTTTTTTTTTAGCTTTATGCACGTAACACTTTTTTAATCCCCATATTAAATTGTGGTATATTCCTGTTTTTAATTGAAATTATGAAAAGACTTTTAAAAACCTGCTTAGCTTTAACACTAAATCAAAGATGATCTGTAATATTTGATATTTTCATTGGATGTTCAGATTTAGTGATTAGCTTTTTCTTAATTGGTTTATGTCTTTCTTTCTATTTCTAGTCTTGGCCTTTCCATCATCCAGTTAACAAGAAATTTGTTCCTGACTATTATAAAGTCATCATCAACCCCATGGATCTGGACACACTCCGTAAGG[T/G]CAGGAAGATCTGTGTGTGGACACAGTAAACTTCAGTTGTAGTTTAGGTCAGATTCTCTGAACTGTTTATTTGTCTGTGTTTTGTAGAACATCTCCAAGCACAAGTATCAGAATCGAGAGGTGTTTCTTTCAGATGTGGGTCTCATTCACACCAACAGTGTCAAGTATAATGGTGAGAAACAGTTGAATGTTTATACTTATAAAAATGCTCTTTCCTCTTGCATTACATCAAAGCTTCACGTTTGCATTCTGTTTTTCTACTTCTCAGGTCCTGATAGTCCTTATACAAAAACTGCTCTGGAAATTGTGAACGTTTGCAAGCAGACTTTAGCGGAGGTGAGTCTGTGTGAGAGTCAGAGCTCTTTGTTGTCTCCTATAGCTGCTCAGTTGTTAAAAGTTCTCATTCTTGATTCAAACACCCATGCAATTTTAATGCTATGTTTGATGTTTGTTGTCTTTTCAAGCGGTGTTGTTAGGACTGGTTACAAAACTTCAAAATTA
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
sa15367
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000051196 Nonsense 1668 1947 35 40
ENSDART00000123402 None None 587 None 13
ENSDART00000126927 None None 369 None 10
ENSDART00000130225 Nonsense 1648 1910 36 43
Genomic Location (Zv9):
Chromosome 5 (position 38163215)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 35962899
GRCz11 5 36563052
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTGATAGTCCTTATACAAAAACTGCTCTGGAAATTGTGAAMGTTTGCAAG[C/T]AGACTTTAGCGGAGGTGAGTCTGTGTGAGAGTCAGAGCTCTTTGTTGTCT
Long Flanking Sequence:
TGTAATATTTGATATTTTCATTGGATGTTCAGATTTAGTGATTAGCTTTTTCTTAATTGGTTTATGTCTTTCTTTCTATTTCTAGTCTTGGCCTTTCCATCATCCAGTTAACAAGAAATTTGTTCCTGACTATTATAAAGTCATCATCAACCCCATGGATCTGGACACACTCCGTAAGGTCAGGAAGATCTGTGTGTGGACACAGTAAACTTCAGTTGTAGTTTAGGTCAGATTCTCTGAACTGTTTATTTGTCTGTGTTTTGTAGAACATCTCCAAGCACAAGTATCAGAATCGAGAGGTGTTTCTTTCAGATGTGGGTCTCATTCACACCAACAGTGTCAAGTATAATGGTGAGAAACAGTTGAATGTTTATACTTATAAAAATGCTCTTTCCTCTTGCATTACATCAAAGCTTCACGTTTGCATTCTGTTTTTCTACTTCTCAGGTCCTGATAGTCCTTATACAAAAACTGCTCTGGAAATTGTGAACGTTTGCAAG[C/T]AGACTTTAGCGGAGGTGAGTCTGTGTGAGAGTCAGAGCTCTTTGTTGTCTCCTATAGCTGCTCAGTTGTTAAAAGTTCTCATTCTTGATTCAAACACCCATGCAATTTTAATGCTATGTTTGATGTTTGTTGTCTTTTCAAGCGGTGTTGTTAGGACTGGTTACAAAACTTCAAAATTATTACAGAAACACTGGGGTAACTGTTTATAGTTGGGGTTGAAACATTGATACCTAAAATATCACTCAATTTGACACTACTAATTTCGACATATGACCATTAAAATATGTTTGTCACTGAATATTTTTTTCATAAAGATTATTCAAAAAGGCATCATTTTCTATATCAAAGGTGTCAAACTCTGAGGACTGTAGTCCTGAAGCCTGAAGAACTCCATTAGTTTGATCAGGCATGCTTTATTAGGGTTAAAGCTTAACTGTGCAAAGCTGTGGTCCTCCAGGAACTAAGTTTGACATCACTGATCTTTTGAATTGATTCTGAGG
Associated Phenotype:
Not determined