ZMP
ssh1a
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate slingshot homolog 1 (Drosophila) (SSH1) [Source:UniProtKB/TrEMBL
Human Orthologue:
SSH1
Human Description:
slingshot homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:30579]
Mouse Orthologue:
Ssh1
Mouse Description:
slingshot homolog 1 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:2686240]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa45195 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa40393 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa45195
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000079332 | Nonsense | 268 | 884 | 9 | 14 |
| ENSDART00000127919 | Nonsense | 302 | 427 | 10 | 12 |
Genomic Location (Zv9):
Chromosome 5 (position 22070360)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 19783232 |
| GRCz11 | 5 | 20287032 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGTAATCTCTTTATGTAAATGTATTGCTGTTTTAGGGTGGGCCACATCT[T/G]AAATGTCACAAGGGAAATAGATAACTTTTTCCCAGGAACATTCTGCTACC
Long Flanking Sequence:
GAGAATGAAATTACTTTTTATGTTAGTTCTGTAACAAAAAATATGCTAGTATTTGTCATAAATTGGTGCACTGCATGCTAACTTCCCTAAAAAAGCAGTGAATTACATTACGTATTGCTCATTTTCCAGGGTTCTGAATGGAACGCTTCCAATCTAGAGGAACTTCAGGAAAGTGGGTGAGTTCACCTTCAACCTCCCATCCATTTTTTCTTGAGATACTGTTTATTTAAATGGGTTTATGTTAGGTAAATGTGAAAGTTTCAACTGAATGTGTATCATATATTGCTATTTAAAGGGCAACATTTTCTCCTGTTTCAGCTGAAGTTCAGAGTAGAATCATCAAAGCGTTTTATTTTACTCTAAGAATCAGGGTATTTATAGTACCTGGTTAGGCAAAAAAAAAAGAAACTTGCATGCATGTAGATTTCCATTGTTCTCCAGATGTAATATATGTAATCTCTTTATGTAAATGTATTGCTGTTTTAGGGTGGGCCACATCT[T/G]AAATGTCACAAGGGAAATAGATAACTTTTTCCCAGGAACATTCTGCTACCACAATGTCAGAGTGTATGATGATGAGGCCACAGACTTACTGGCTCACTGGAATGATACCTACAACTTCATTGTCAAAGCAAAGTGAGGAACTATTTTGCATTTCTGTCTTTTAAATCTACTCAACATGCTCTTTCTCTTTCCAAATGATTTTTTAACAGCATCTTTGTTCTGTATCTACAGAAAGAATCATTCCAAATGTTTGGTTCACTGTAAGATGGGCGTAAGCCGCTCTGCTTCCACGGTGATCGCATATGCCATGAAAGAGTACGGCTGGACTCTGGAGAAAGCATATAACTTTGTTAAACAGAAGCGCAGTATCACTCGTCCCAATGCCAGCTTCATGAGACAGCTGGCAGAGTATGAAGGCATACTGGATGCCAGGTACAATAAATTTCCTTTTTTTGTATTCTAGCATTTGTATTTTAGATAAAGATAAAAATAAATTGTAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa40393
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000079332 | Nonsense | 721 | 884 | 14 | 14 |
| ENSDART00000127919 | None | None | 427 | None | 12 |
Genomic Location (Zv9):
Chromosome 5 (position 22073104)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 19785976 |
| GRCz11 | 5 | 20289776 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAGAGAGCTGAAAGGTTTAGAGAAGGCAGAGGCGTCTTGTTCTCCTCAA[C/T]AACAAGAGGCTCTGATTCAGCTCCAACGCTCCGGTTTAGTTCGACGTCGA
Long Flanking Sequence:
CCCACATAAAGTATTAGCACCCTGAACCATTTACAGATGTTTTTATTTTCATTAAATATTTTTTTTTCTTGTGTATTCTTGTTCAGGAAAGTGCCCAAGTAAAGACAAGGCTTGCTCCTGGTTCATCGCTTGCTTCCAAGCCCATCCAAAGTGCTCTTTCGGAGGCTAACAGACGAGGCCTTGCCCCTTTACCCCTCAACAGTGCGCCCTGTATCTCCATTCAGATGCTATCCTGTGCCAACTTGTCCATGACAGCCAAGTGTGGCAGAACTGTCTCAGATCCGTGCCTTGATGCCAATGCAATGTCCTTAGGGAATAACGATATGCCAGAAAGCAAATCTCTTGACCAGGAAACTGAAACCCAGACAACTCTGCCTGAGGCCAAAGGAGAAGGAGATTTCAGGCAGGAAGAGACTGATCTACAGGGTTCCTCTGCTCTTCCCCGGAATGAGAGAGAGCTGAAAGGTTTAGAGAAGGCAGAGGCGTCTTGTTCTCCTCAA[C/T]AACAAGAGGCTCTGATTCAGCTCCAACGCTCCGGTTTAGTTCGACGTCGAAAAGAACGATTGGAAAAACTCTCCGGTCTCTTCCAGGAGCGTGCACGCGCAAATGAACAACGGGAAGCTGGTTCTAGTAAAACAGAAGATGCAATGAACAGTTCCAGTGATCCAGCTGACCCCTTTCACAGGTCTTTTGGAACACGGAATGATTTTGGAACTGAATCGGCAGTGCCACTGACCAATGAGGCTTTGTTGGCAGTCCTCGGATCAGGAGGATTGACTCCAGTCTCATCTCCACACGGCTCTACGCTCACCCGCAGCTCCAGCAGTGACAGTCTTCGCAGTGTCCGAGGCAAACCAGGCCTTGTGCGTCAGCGTACACAAGAAATTGAAGCACGAATGCGATTAGCGGGACTGACTGTTCCTTCACGACTCAAGCGCTCTAACTCTCTCGCCAAACTAGGCAGTCTCACCTTTTCATCTGAGGACTTGTGCTCGGCCTGCTCC
Associated Phenotype:
Not determined