Busch Lab

ZMP

zgc:65851

Ensembl ID:
ENSDARG00000012281
ZFIN ID:
ZDB-GENE-030131-9669
Description:
internexin neuronal intermediate filament protein, alpha [Source:RefSeq peptide;Acc:NP_955828]
Human Orthologue:
INA
Human Description:
internexin neuronal intermediate filament protein, alpha [Source:HGNC Symbol;Acc:6057]
Mouse Orthologue:
Ina
Mouse Description:
internexin neuronal intermediate filament protein, alpha Gene [Source:MGI Symbol;Acc:MGI:96568]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa40375 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa16183 Nonsense Available for shipment Available now
sa40374 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa40375
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000018351 Essential Splice Site 354 562 2 4
Genomic Location (Zv9):
Chromosome 5 (position 14881862)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 13175720
GRCz11 5 13675937
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCTGGCAGAGATGGAGGACCGGCACAGCAACGAGATCGGAGAGCTGCAG[G/A]TCAGAAAAAGAGAGCAATCCATTATTTTAAACACATTTTACATTTAAAGT
Long Flanking Sequence:
GATATACGTAATCTGACAGTTTAAGTGCATTTTCAGATTTAAAATTTAGGGCAAACTATTTTTGTTTTCTTAATGGCATGCACAGATGAATTGTTCACCACTAAACTACCAGTGCGAGCTAACAAAATCAGTAGGTTAGATTTGATTTCATGTGCATTTTAACAGTTAGCTTGTTGTCTTAGGTTTCAGTGGAGATGGACGTCAGTAAGCCTGACCTTGCTGTGGCCCTGAAGGACATCCGTGTTCAGTACGAGTCTCTGTCATCCCGGAACCAGCAGCAGGCAGAGGAGTGGTATCGCTCTAAGTTCGCCACTGTGACGGAGGCTGCGGCTCGCAATAATGATGCTCTGAAGCAGACCAAGGATGAGCTGTCCGAGTACCGGCGACAGCTGCAGTCCAGAACCCTAGAGATCGAGGCCCTCAAAGCCCACAATGAGGCCCTGGAAAGACAGCTGGCAGAGATGGAGGACCGGCACAGCAACGAGATCGGAGAGCTGCAG[G/A]TCAGAAAAAGAGAGCAATCCATTATTTTAAACACATTTTACATTTAAAGTTCCCATGAAGTGCTTTGAAATGTACAATTTTATTCAGTGTTTGACATAATCTCAACCGAAACATGAAGAAAGGGTTGGACATAGCGTAGCTCATTCCCTTTTAAAAGAAAACAGCCAATAGTGTTTTGTTTTATCAAAGCTCTGGCAGAGAGAGTGGTTAAGCTCAAGCGCATCAAATGAAAAGCCAACGAGAAGCCTCTTGAAGGGGGCGGGGTAAATCAGATACCAGAGAGCATTTGATTGGTCATGATTTGATGAGCTGAACTGAAGTATGAGGTGACATGAATAAAACCATTAATCATTTAGGCAGAAAAAAACTAAACTAGCTTTACATTTTTATACCAGATTTATATCCCATAAATGCAAATTTTGTCACTATTTTGGTGCGCACTAGCTTATTTTTGCTAGACAGAACCATTAATGGACATTTTTATGGACATTTCAGTGACA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16183
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000018351 Nonsense 395 562 3 4
Genomic Location (Zv9):
Chromosome 5 (position 14878917)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 13172775
GRCz11 5 13672992
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAGGACCTGCTGAATGTCAAGATGGCSCTGGACATTGAGATCGCAGCATA[C/A]AGGTCAGACWCCTTCATTATTWTAATGACTATTGGCAACATAGGCTCATT
Long Flanking Sequence:
TATATTGTGTTCTTAGGAGGAGGGGATTTGGCTAAACAAAGCATGCAAATTAAGCGTTGTGGTCGGCAGGGTAAACTGCTCTTTCAGGCATTGATCTCATCATGTTCTGGAGACAGAAACCGCCTGACCATTTGATCGAAAAGAGAAAACAATAGACACCCCATGCTGTGAAACTGACAATTTGCATTACTTTGGCTTAGCCTTTAATCAGAAAGACAAAAGGTTAATGTCCTTCCTAGCTGGGATGTTAATGAAATTATATAATTAAAAACCAGAGAATATAACTTTTCAGTTATACGTAGATTATTGTTCATTTGGAATTAGTTGATAGAAATTTATATTTCCACAGCGTAAACAAATGTCTTGTTTCTGCTGCAGGATACCATTCAGCAACTAGAATCTGCTCTGCGGAGCACGAAAGGTGAGATGTCCCGGCACCTGCGCGAATACCAGGACCTGCTGAATGTCAAGATGGCGCTGGACATTGAGATCGCAGCATA[C/A]AGGTCAGACTCCTTCATTATTATAATGACTATTGGCAACATAGGCTCATTTTGAATACATAGCCCTTTATACGTTTCTCGAGATCGCAAATTATGTAGCCAGAGCTGCCTATGGCTTTGTTTCCTCTTTAAAACGAATGCTATGGGATGGTATGAAGCTATCAATTGGTGCATTTTAAAACACTATAGGTTGGGTTTACGAAAAGGGAAGGATGGGGTTATCAGTCGGTTGATCAGTCAGCTAGTAGATTTAAGCGAGAACAGCAGGCACGAATGGCACTCGCAAGAGAAATTTGAGATCTCAAAACAACTGCAAAGAAACGTAGCTCCTGGGACATATGTTGCTCTCTTCAGAAATGTATATAAGGGTACGCAATCAGAATGAGCCTGGGTTGACTATTCCTTAATTTGACGCAATACTTCATCATTATCCACATATGCTCGTTCTCAACAGGAAGCTGCTGGAAGGTGAGGAATGCCGCCTGAGCTCTGTGGGCGGAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40374
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000018351 Nonsense 439 562 4 4
Genomic Location (Zv9):
Chromosome 5 (position 14878336)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 13172194
GRCz11 5 13672411
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAGTCGCACGTATACCCTAAGCGCCTACAGGAGGGCTGGAGCCAAACCC[G/T]AAACAGAGGAAGAGGAAAAGCAGGAGGAGGAAGAGGAGGAAGAGGAGCAG
Long Flanking Sequence:
AGATCGCAAATTATGTAGCCAGAGCTGCCTATGGCTTTGTTTCCTCTTTAAAACGAATGCTATGGGATGGTATGAAGCTATCAATTGGTGCATTTTAAAACACTATAGGTTGGGTTTACGAAAAGGGAAGGATGGGGTTATCAGTCGGTTGATCAGTCAGCTAGTAGATTTAAGCGAGAACAGCAGGCACGAATGGCACTCGCAAGAGAAATTTGAGATCTCAAAACAACTGCAAAGAAACGTAGCTCCTGGGACATATGTTGCTCTCTTCAGAAATGTATATAAGGGTACGCAATCAGAATGAGCCTGGGTTGACTATTCCTTAATTTGACGCAATACTTCATCATTATCCACATATGCTCGTTCTCAACAGGAAGCTGCTGGAAGGTGAGGAATGCCGCCTGAGCTCTGTGGGCGGAGCCATTCTGCAGTCTGCCTACTCTTATCCAACCAGTCGCACGTATACCCTAAGCGCCTACAGGAGGGCTGGAGCCAAACCC[G/T]AAACAGAGGAAGAGGAAAAGCAGGAGGAGGAAGAGGAGGAAGAGGAGCAGGAAGAGGAGAAGGAGGAAGAGGAAGCAGAGGAGGAAGAGGAGGCTGGAGAGGAGGCTGAAGAAGGAGAAGAACAGGAAGAAGGAGGAGATGAAGAGGAGGAGGAAGAGGAAGAACAGGAGGAAAAGGAGAAGGAAAAGGAGGATGAGAAGAAGGAAAAGGAAGAAAAGAAGAGCCCCAAGGAACAGAAGGAGAGTGAGAAAGAGAAGGAGAAAGAGAAGGAGAAGAAGAGCGATAGCAAGGCAGATAGCAATAAAGCTGATAGCAAGAGTGAAAAGGCGGACAGTAATAAGGGTGAAAAAGCTGCTGCGGCCAAGAGCAAGTAAAGCTGCGCTCCATCAGCGCTTCCGCCACATTCGTCCGTGTCCTCTTTACCTCTCTGTCCCTCTGCCACAAACACACACACCAAAACGCCATCTTCACTCTCATTTCACTGGGTAGAGCTGATTTCA
Associated Phenotype:
Not determined