ZMP
slco1f4
Ensembl ID:
ZFIN ID:
Description:
solute carrier organic anion transporter family, member 1F4 [Source:RefSeq peptide;Acc:NP_001074135
Human Orthologue:
SLCO1C1
Human Description:
solute carrier organic anion transporter family, member 1C1 [Source:HGNC Symbol;Acc:13819]
Mouse Orthologue:
Slco1c1
Mouse Description:
solute carrier organic anion transporter family, member 1c1 Gene [Source:MGI Symbol;Acc:MGI:1889679]
Alleles
There are 5 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa10903 | Essential Splice Site | Available for shipment | Available now |
| sa20314 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa10903
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000084603 | Essential Splice Site | 234 | 571 | 9 | 15 |
| ENSDART00000084603 | Essential Splice Site | 234 | 571 | 9 | 15 |
Genomic Location (Zv9):
Chromosome 4 (position 60487371)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 70647118 |
| GRCz11 | 4 | 72163211 |
KASP Assay ID:
2259-5221.1 (used for ordering genotyping assays)
KASP Sequence:
CATWNAAAAAAAATCYRATTGTTTAAAAAGTGWGCTATDTTCTTGTTTTCT[A/T]GATTTTGCACCAACTTTTAAGCGYCTGCTSACCAATAAGRTCTACATTCT
Long Flanking Sequence:
GTTGTCTCAATCTAACACAACCACATTCCCGGAGGGCCACCAGCATGTATCATTTGTCTGTCTTGCAGGATGGGTTTCAGGTCTGCTAATGTGCTGATGATCTAAATAAGGTGTGTTTTGTTAAGGAGACATGGAAAATGTGCAGTGCTGCTGGTTCTTTAGAACTGTGGTTGAGAACCACTGAGCTAACTGATCAATTTATTTGCATATTCTCTTCTCAGAAAGCGTGACCATCACACCGCAGGACTCTCGCTGGGTTGGGGCTTGGTGGTTGGGTTATGTGGTGTCTGGCTTGTTGACTCTCCTCGCTGCTTTTCCTTTCTGGTTCTTGCCGAAAGTTCTACCTGAAAACTCCCAAATCTCACTGCTAGACAACACCCCACAACAGCACAAAACCACCCCCAGCCTTACAGAGATAGTCAAAGGTAAGGAATGGCAACATTGAAAAGACATTAAAAAAAATCTGATTGTTTAAAAAGTGTGCTATATTCTTGTTTTCT[A/T]GATTTTGCACCAACTTTTAAGCGTCTGCTCACCAATAAGATCTACATTCTGTACCTGGCGTACAGTATAGTGGCATTCAACGACTTCGCCATAGTTGCAACATACACGCCAAAGTATCTGGAACAGCAGTTTGGGCAAAGTGCATCCAAAGCCAACTTTCTGATAGGTGACAACTGTGATGTTGCTAGAATTTTCCTGTATTTCCAGTCTGTTTTAACTGGTTGCATATTTGTACACTGTACATAGGAGTGACATCTATTCCGGCAGTAGCGCTGGGTGTTTTCCTCAGTGGGTTGATGATGAAGAGGTTTAAATGGGGTCTGCTGGCATCCGCAAGAGTGAATTTGTTGACCATAGTCGCCACAGTGTTTTTGGCCGTACCTTTCTTCGCTCTCAGCTGTGAAAATCTAGATATCGCTGGGGTTACAGTGCCCTATCAAGGGTACTATTATCTCCATCTCTTCAATCTAATAACTTTCAAGTCACTTGTACGCTGTAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20314
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000084603 | Nonsense | 564 | 571 | 15 | 15 |
Genomic Location (Zv9):
Chromosome 4 (position 60490072)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 70644417 |
| GRCz11 | 4 | 72160510 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTTCCCTGCTTTGGATAGCCACCATAGAGATAAAGAGAAAAAATACTGAA[C/T]AACAAACAAATGTCTCAAGACACTGAACTCCAAATGCCTTTGTGCGATCC
Long Flanking Sequence:
CAAAAGTTTACATCAAAATGCGTACTGAGAACATGTTCTTGCAGGATTGTGGATCCTGAGCTGAAGTCTCTCTCTGTGGGAATGTTACTGTTAGCTGTAAGAGTTTTGGGTGAGTTTGTAAGGTGTAATATTTATGTTTTTATTTTCTTGGCCTTACAGCATTGTTTACAATGCAATTGACCTTTTTTTAAAGGTGGTATTCCTGCTCCCATTTACTTTGGTGCTCTTATTGACTCGACCTGTCTGAAATGGGGCCAGAATAAATCGTGTGGAAGAGGTGCCTGCAGAATCTATGACATCGAGACGTTCAGGTGAGCTGAACTATTATATTTACCCTATTCTGTTCGAAATAATTTGAATGTACCAAAGCTCTAATTCAAACTGAACTATTTTTGACCCCCATAAGGTTCCTCTTTCAGGGGCTGACCATGTGTCTTCGAGTATTAGCCTGTTCCCTGCTTTGGATAGCCACCATAGAGATAAAGAGAAAAAATACTGAA[C/T]AACAAACAAATGTCTCAAGACACTGAACTCCAAATGCCTTTGTGCGATCCAGAAATTCAGAAGACAACAAAGTATTGTTCTGTGGTGTTTTATTTTTTAAGTGCACTTCATGTATATGTATATTCTACTTTTCTCTTTTCAATATTATCAGTGTGAAATGCACTAGTATATGCAACGTTTAGATAATAAATAAACTGTTTAATTGTGCATGTGGATTTCCCACGAAAAAAGAAATTTCATTGTCAAGAGTCATTGCATCGTAATGCATGGTAAGGGGGTGGGGGTGGTAGTCTTAGGATGATTCTAAGGGCTCACACCATTTTGGGGCCCCCAGAGTTACTAGTTATCTTAGGGCTTGGTAATGAAAATTCCTGTGAGTCACGCAACAGTCTGTTTTGTGTTCTGATTGGCCTTACATTGGCCTGTTTTAAATTCACAGAATTCCCATGAGAATGACAAAATAATTGCATTTGAGCCATTTGATACATGAAATCTAAATG
Associated Phenotype:
Not determined