ZMP
si:dkey-21h14.7
Ensembl ID:
ZFIN ID:
Description:
tetraspanin-11 [Source:RefSeq peptide;Acc:NP_001038502]
Human Orthologue:
TSPAN11
Human Description:
tetraspanin 11 [Source:HGNC Symbol;Acc:30795]
Mouse Orthologue:
Tspan11
Mouse Description:
tetraspanin 11 Gene [Source:MGI Symbol;Acc:MGI:1915748]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa40240 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa33406 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa33407 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa40240
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000023638 | Essential Splice Site | 29 | 254 | None | 7 |
| ENSDART00000138661 | Essential Splice Site | 29 | 254 | None | 8 |
Genomic Location (Zv9):
Chromosome 4 (position 10240178)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 11176805 |
| GRCz11 | 4 | 11175654 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CACGGTGTGTCTCAAATACCTGCTCTTTGTTTTCAACTTTCTCTTCTGGG[T/C]GAGTCTGAACTCCACTTTGCTGGTATAGCTCTTATCAAAAAGGAAGGAAA
Long Flanking Sequence:
ACCTTTCTAATCTGGTGCTGCCATTCATTGTCCTCAAAATTTTTAGAGCCGACTATGTGGGTTGGACACTCTGTAGTTTTGTTGTGTTTTAAACCATTTCAAACCAAACACCCTCATTTTATCGGCCGTGCGTGGCTGCTGTTTTGACACGCGACGCCTCCACACTAGGCCCCGAAACGAGCGTGTCGTCTGTCTGTGGTTGAAACCCATGGGCCACAGCTGTTAATTAACATGTCATGCAAAAGAACAGCGTTTGACTGCCATCTTTCCAAAAAGCCTGTTTACGATCCTGCCCACCTCCTCCTCTTTGTCCTTTTTTTTAAAAAATCATTTTGCCTCATAAATGCTTAAAGATTGAACAACTTTCAAACTTCTTTTCTTTTACACTTCTCTCTTCTCAGCAACAGGAGAGATGGGCAGCATGTATAAAGATGAGCAGGGTGACTGGATCACGGTGTGTCTCAAATACCTGCTCTTTGTTTTCAACTTTCTCTTCTGGG[T/C]GAGTCTGAACTCCACTTTGCTGGTATAGCTCTTATCAAAAAGGAAGGAAAAAAGTTCTTAGATCATTAAGGATGTAGTTGAATCATTTCTTCTGCAGAATTAGATAGATTATTAGCTGAACTTACAGTACTTGTTATAAAATGTTGGGTACTGCCACTTTAAGAGTCACAAAAGCAGATAAAAGCAATGAAATGAATCAAAATGAACATCTCCTGATGATATATTGAAGACAAATTAGGTGAAACGATTGTTCTGAAGTAATTATGAATTCTATTGTCAAATAAAAATAAGTTAAAGGAATAGTTACAATACAGGCTCATTCTGAAAATGTAGCTCTATATACATTTCTGGAGATCATGAATTATGTAGCCAGAAGTACGTATGGCTGCATTTCATTTTTAAAACATACGCCATGGCTCGGTATGACGCCATTCCTGTTCACGCTTACCAACTGACCGCTTTTCTCTCTTAACCAGTTTGACCAGTAGCTCGCCATATAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33406
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000023638 | Essential Splice Site | 118 | 254 | 3 | 7 |
| ENSDART00000138661 | Essential Splice Site | 118 | 254 | 4 | 8 |
Genomic Location (Zv9):
Chromosome 4 (position 10249673)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 11186300 |
| GRCz11 | 4 | 11185149 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTCATCGAGCTGGTGGCTGGAGTTCTGGCCTATGTGTATTATCAGGCGG[T/C]AAGTGAACTCTTTCCACAACACTGACACACAAAACAAAGCTCTTAAGAAT
Long Flanking Sequence:
ATAATTATCATTATATTTCTGTTTAAGATTATAATTTTTAATATAACAGATTATTTCTGTTTAAGATTATATTTATATTTATATTTTATATTTTTTTGTTTAATTTTTAACGTCCTCTTGACCTTCATATTGAGTATGATGGGAATCGTGATTATGTTTTACATACAGTTTTGTATTTCTCATAGATAATTAGGATATACATGAGCATTTTATGGCATCCGCCAGAGTACTTGGTGGTTCATTCCACTGTGGCGACCCCTGATAAAGCAGGAACTAAGCCAGAGGAAGGATCGAATGAGCATTTTATGACCTGTATAGCATACACATTGTACAGCAATAATAACTAGACTTCCTCCTGTTGCCTGATTAGAATGTATTGCATTAATTGAATTTTCATTGATCATTGGTTCCTGTGTTCCTCTAGTACTTCTCCTGTCTGCTTCTGATCTTCCTCATCGAGCTGGTGGCTGGAGTTCTGGCCTATGTGTATTATCAGGCGG[T/C]AAGTGAACTCTTTCCACAACACTGACACACAAAACAAAGCTCTTAAGAATAACACCAGATTGCTTTTATGATGGATATAGTTGTAGGACGGTATCAGGCACAGATGAGGTGTTTGACAGATGACACTGCCTACCGCTCGCTCTATCGTTGTTTTTATTTTTCTCTCATCTCGATCTCTCACAGCTGAGTGAAGAGCTGAAGCAGCACTTGAGCAAGACAATGATGGAGAACTATGCTCAACCTGGGAAAGAAAGCATCACTCAGTCTGTGGACCGACTACAGCAGGATGTGAGGAACTCTAAGTCATGTTTCTAAGCTTTTTCACTTCTTGGTTTTTGAAGGGCAGTTCTTTTATAAGTATGTTTTAATGTTGAATTGTGTATCTGTAGTTTTTGCTGAGAGCGCCATTAGTTTAAAGTGTAAAGTGTCAGTGTAAAGCTGTTTAATTTAATTTAATTTAATTTAATTTAATTTATTCAATTTAATTCAATTTAATTGTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33407
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000023638 | Essential Splice Site | 235 | 254 | 6 | 7 |
| ENSDART00000138661 | Essential Splice Site | 235 | 254 | 7 | 8 |
Genomic Location (Zv9):
Chromosome 4 (position 10252366)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 11188993 |
| GRCz11 | 4 | 11187842 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCACTTGCTTATCATTGGTGCTGTGGGAATAGGTGTGGCCTGTCTACAGG[T/A]AAGTCCCTCCCCCTTATGTAGATTATGAAATTAAAGGAATAGTTCACAGA
Long Flanking Sequence:
AGATGTTTCCCCGTTGTCTGTGGGAACGACAGTACGCCTGTGAATACCATATCCTCATGAAGTGCTTGATACGGCCCTCGGGAGTGAGTTTGACTTAAGAAAGCACAGCTGTGAGCTCAGCAGGTGTGCTTGGTTGTAACATATATGAGCTTGTGAGGTGTGAGGTAATGCTGCACTTATTCTTTGGGAACAGACCTCCGGTTTGATATATAATACACCGCAATACAGGTTTTACAGGCCTCTCAGGAGCCATTAGCTATATTCTATACCTGATACGTCTGGTAAATCACACAAGAAAAATAGGTCTCCCTATCATGCTTTATCAGGCTGCTAAATAAATCCGTTTATATGTCTACGTCTGTGTGTGTTGACACTGAAAAGGCAGGCTTATTAATGCTGTGGTTTCTCATAGGGAGGCTGCATTACTAAACTGGAGCAGTTTCTGGCTGATCACTTGCTTATCATTGGTGCTGTGGGAATAGGTGTGGCCTGTCTACAGG[T/A]AAGTCCCTCCCCCTTATGTAGATTATGAAATTAAAGGAATAGTTCACAGAAAAAGGACTAATGATTATAACATGATGTTTTAGAATCATAGGATTTATTGTTTCCTGTATATGATATAATAATTTCCTGTAGTAATAATGGCGTCACGGGGGCGCAGTGAGTAGCACGATCGTCTTACAGCAAGAAAGTCACTGGTTCAAGCCTCAGCTGGATCAGTTGGCATTTCTGTGTGGAGTGTGCATGTTCTCCCCGTTTACGTGGGTTTCGTCTGGGTGCTCCGGTTTCAAGTCTAAAGACGTGGTATAGGTGAATTGGGTAGGCTAAATTGTCTGTAGTGTATGTGTGTGAATAAGAGTGATGGGTTGCAGTCGGAAGGGCATCCACTGCGTAAAACGTACAGTATACTGGATAAGTTGGTGGTTCATTCCGCAGTGGCGACCCTAGATTAATAAAGGGATTAAGCTGATAAGAAAATGAATGAATATTAATAATAATAATAA
Associated Phenotype:
Not determined