Busch Lab

ZMP

zgc:112484

Ensembl ID:
ENSDARG00000037943
ZFIN ID:
ZDB-GENE-050417-155
Description:
hypothetical protein LOC550361 [Source:RefSeq peptide;Acc:NP_001017668]
Human Orthologue:
CPT1A
Human Description:
carnitine palmitoyltransferase 1A (liver) [Source:HGNC Symbol;Acc:2328]
Mouse Orthologue:
Cpt1a
Mouse Description:
carnitine palmitoyltransferase 1a, liver Gene [Source:MGI Symbol;Acc:MGI:1098296]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa14740 Nonsense Available for shipment Available now
sa31337 Nonsense Available for shipment Available now
sa40093 Nonsense Mutation detected in F1 DNA Not yet available
sa38399 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa14740
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000055294 Nonsense 26 780 1 18
ENSDART00000055295 Nonsense 26 170 2 4
Genomic Location (Zv9):
Chromosome 3 (position 32422496)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 32153806
GRCz11 3 32285520
KASP Assay ID:
2259-3645.1 (used for ordering genotyping assays)
KASP Sequence:
CATTTCAGTTCACCATCAGTCCTGAGGGGATCAACCTGCATCTGTCTTAC[C/T]AAGCCCTCAAWCAAATCTACCTCTCCGGATTGCGATCCTGGAAGAAGCGC
Long Flanking Sequence:
TGTATATATGTAATTAATGCAATTTTACATCTTCAATTCTCAGTTTTATATTCAAAACCAAAAGACCTTAAAGAAGATTCTTTTAAACTGTGTTCAACTGTACAATAAATGTCAATGGTTGTTGTACATAAATGCACCACTAGGTGTCATTGGTGTTTTAGTTGTGGCCTCAATTTGTTTCTAGACGTAAATGGTGTATCGACAGGAATTTACTTGAGAGGCCTTCCCTAAGATATTCATGTCTTTTACTCTGTTCCTCGTGTGTTTGCCTTAACAAACAGTGTAACCATTTCAAACAAAATGTAACAAAACTTTGTATTTTGAATGCTGTATTGAGACCAAATTACACAAGTGAAGTATACATGTTTCAGACAGAGTTTTTTGTTCATTTTGCTGATGATATTGTGTTGTTTGTGTCCACAGTGATGGCTGAGGCTCACCAAGCAGTGGCATTTCAGTTCACCATCAGTCCTGAGGGGATCAACCTGCATCTGTCTTAC[C/T]AAGCCCTCAATCAAATCTACCTCTCCGGATTGCGATCCTGGAAGAAGCGCATCAGCAGGATTAAGGTCAGTGAAAAAAATAATCATCAAACTCAGTGAACTCATAGAATTACCTAAAAAAAACAAAACTTTGTTTTTTTCTGTTGGGAAATAAAAAAAAAACAAAACTTTGTTTTTTTCTGTTGGGAAATTAAGCTAGTTATCTGCACAGAAGAGTTTTCTTCAATACATTTTCTGTGACATCATGAAGATCCTAATATAGTCAAATGTGCAACGTGTGTGCATGTACATAAGAGGCATTAATAATTATGAACTTTTTTGCTTTTCTGTGGACAGAACAGGATCATTAAGGGTGCTTATCCAGCTAGCCCCTCCTCGTGGCTTTTTATTGTCATTGCAATTCTAGCCACGATGTACATGCAGTCCGATCCATCAATGGGTCTCATCGCCAAGATCCAGGAACACCTGCCCCTTAGGTAACTCTTATGGTTAAGTTGCATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa31337
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000055294 Nonsense 138 780 3 18
ENSDART00000055295 Nonsense 138 170 4 4
Genomic Location (Zv9):
Chromosome 3 (position 32416423)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 32147733
GRCz11 3 32279447
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCTGAGGTTCTGCCTGAAGCTTCTCTTGTCCTACCACAGGTGGATGTTT[G/T]AACAACATGGTCATATGTCTACCAAGACCAAAGTGTGGGCGGTTAGTGCT
Long Flanking Sequence:
TCTAATTGTATTAGAGATTGGCAACTTGGTAAACGTGCACATTTTAACACTTTCATTTTTTTTCTGAAAGTCCAGTATTTGAGAAGTTTGTTTGTCACTTGAGTATTTTATTTTTATTTTTTACTTTTTATCGAAAAAACAAAAGAGATTCTGTGTTAACAAGAAAGATTATTTGTGTCTGATTCTGACTTGTTTCATTTCATTTATTATTAAAGCCCACTGTTTGCTCCACATTTGGTGTGTAATCATAAATCTGCATGCTTGAAAAAAGTCTAAAAATTAAGGTATAGTCATATTTGTGTTGTCTGCAGCTAATGTTGACCAAGAAGTGATGTTGCTGATTGTTTCTGCTGTGTTTGTGTACTGTCAGTCTGTCATTGAGTCCTCAAGGTCAGACCATGCTGTCGGCGCTGCTGTTCAGTACTCTGCTCTGGATGTCTCTCATTCTGACTCTGAGGTTCTGCCTGAAGCTTCTCTTGTCCTACCACAGGTGGATGTTT[G/T]AACAACATGGTCATATGTCTACCAAGACCAAAGTGTGGGCGGTTAGTGCTTCATTACTTTCAGCCTGGTTTAAAAAAATACATTTTCATTTTTTTTCTTAGTTCATTCTTTCTTGAAACAATAACAAAAAGGATTTGTGTTCTGAGCATGTGTTCAGATTTTTACTTGGCCTGCAATACAATACATTAATAAAGCATGCTTATATAGTAGAATTTGTATGTAATCTAATCTATATGTAATCTAGTTTAATATGTTACTTATTATTATGATTATTACTGAACACACATGCATGTACAGCTATCTTTATAAGGACTTCCCACAGATGCAATGCTTTTCATACTGCACAAGCTATATATTTTATCCCCCTAACCCCAATCCCCACCATAGTCCTAAACCCAACCCTCACAGGAAGCAATCTGCATTTTTTACATTTCCAAAATACTTTATTCTTTGTGGTTTATGTTTCATTTTCCAGATTAGGCTAAAAAAAATGTCCCCGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40093
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000055294 Nonsense 352 780 9 18
ENSDART00000055295 None None 170 None 4
Genomic Location (Zv9):
Chromosome 3 (position 32398685)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 32129995
GRCz11 3 32261709
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGTTTATCACAGAGGCCGTTACTTCAGATTATGGGTCTACCGAGCTGGA[C/T]GATTGCTTTCACCTAGAGAGATCCAATTTCAGATTCAAAGGATTTTGGAT
Long Flanking Sequence:
CTCGACTACTCCATGCTTTCCGCGCATGCGCCCCCCCCACTTGAACTCTTTTTTTTTTTTTTAACTAATGACTTAAAGAAAATACTGAGGACATTTAAATTTTTGCATTTTCATTTTATGCAGCGGTCTGTGATAAACTGTGTGCTGTGACAAAATTGGTGATTTATTGAGAATGAGCAGTATAGGGGAAAATGTGAATCAGTTTTTCTGTAATAATTGACATTATGACATGATTATTTCTTTAGAGTCGTATTCCTGGTACGGTCATACCGCTGTGTGCAGCTCAGTGTGAGCGCATGTTCAACACCACTCGAACACCTGGAGAAGAGACTGGTAAACGCACATTCATACAGACATGCAGACATAAATACGCATTAAGAAAATGGCCTTTGATGCAGTCTCTTTGTCTCTCAGATGTTCTGCAGCACTGGCAGGACAGCGAGTTTGTTGCTGTTTATCACAGAGGCCGTTACTTCAGATTATGGGTCTACCGAGCTGGA[C/T]GATTGCTTTCACCTAGAGAGATCCAATTTCAGATTCAAAGGATTTTGGATGACCCCTCACCTCCTTCTCCAGGAGAGGAGAAACTAGGAGCACTGACAGCAGGAAACCGGTTAGACACTCGTGTTTTTTTAAATTGGGGGGGTAATGTGTGGATTTATGTCAGCAGAACACTTTACTGTGAATATTTCCTAGATAGGTCTGATCATTCCAGAAGAACTTTTAGACAACATCCTCTGTGCATCGATTGTTGTGGTATTCTGTTACATTCAAATTTTATTAATATTAATTTTATTAATTCAAATAGTTGTCTTTGATTTTATAATTTTAGAGGTAAAGACTCATGGTGGAATATAAATTTTATGGGTTATCCTCCAAAAAAAACTAAAGTAATGATATTATAAAGGCTATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa38399
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000055294 Essential Splice Site 713 780 16 18
ENSDART00000055295 None None 170 None 4
Genomic Location (Zv9):
Chromosome 3 (position 32376344)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 32107654
GRCz11 3 32239368
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATCTAGTCAACCACCCAGAGTTCATCTCCCTGGGGGGAGGCTTTGGTCCT[G/T]TGAGTTACTGATCAACACACACATTATCTAAATGTAAATTCCACAAACTG
Long Flanking Sequence:
GGCCAGAAGATTTAATGAGACGCACAAGGTGACGTCAATAAAAAATCATTGATCCATTTACGCAGAAGTGACAAACTGCAAGTTTATATCTTCCTAATGGAACATTTTGGAGCATGCTAGTTTATAGATATTGTTAAAGTGAGTTGTATAGAGTGTAATTTTAAGGCTTGGATGTGTGTAAAAGATACAAATCAATGTGTGCTCATACTTCATTTGTAGAAACTAGGGTTAAGACTAACATACTGAAAACATCTCAAAATTTCTATTAGGATTTTACAGGGACTTTAAAAATGAAGTGTGACATTAAGGTAATTTATGAGTAGGAGATAATTAGCATGGATGTGAGGGCGTGAAGCTGTTTTTATATGCGTTTATGTGAACTGTAGGTTTTGTCAGAGCCCTGGCGCCTCTCTACATCTCAGACACCTGTGCAACAGATGGAGCTGTTTGATCTAGTCAACCACCCAGAGTTCATCTCCCTGGGGGGAGGCTTTGGTCCT[G/T]TGAGTTACTGATCAACACACACATTATCTAAATGTAAATTCCACAAACTGACTGCGGCTCTAATTTGATCACTGAGTTCATGGTTTGTTCCTGTTTAGGTAGCTGATGATGGCTACGGTGTGTCTTACATCATCATGGGAGAGGACATGATCAACTTCCATGTGTCTTGCAAGCACTCCTGCAAAGAGACAGTAAGAGCAAACCTAACAATTTAACAGCCACAATTTAAAACCTTGCTAAGCCTCCTGGTGACTGTTTGTTTGTTTGTTTATTTATTTATTTATATATATATATATATATATATATATATATATATATATATATATATACATACAGTATATTTATTGATTTATTTATTTATTCTTTTTTTTTACCATGAACCAATATGTGTATGGGCAGTATTATTATTATTATTATGAATATTATTATTATTATTATTATTTTAAACACTGAAGTAAAATTAAACTGAAAATAAAAATCATTTTCATATAGCAAAAAGC
Associated Phenotype:
Not determined