ZMP
si:dkeyp-69e1.7
Ensembl ID:
ZFIN ID:
Description:
HMG domain-containing protein 4 [Source:RefSeq peptide;Acc:NP_001120984]
Human Orthologue:
HMGXB4
Human Description:
HMG box domain containing 4 [Source:HGNC Symbol;Acc:5003]
Mouse Orthologue:
Hmgxb4
Mouse Description:
HMG box domain containing 4 Gene [Source:MGI Symbol;Acc:MGI:1918073]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa40068 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa40068
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109312 | Essential Splice Site | 611 | 624 | None | 12 |
| ENSDART00000133523 | Essential Splice Site | 611 | 624 | None | 13 |
Genomic Location (Zv9):
Chromosome 3 (position 26975106)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 25929130 |
| GRCz11 | 3 | 26060001 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATTATGTAAAGTTTATTATTTTAACTGTTTTCATGATCCTTGTTTTTGC[A/C]GTCAAATACTCTGGACAACATCGCTTACATAATGCCTGGACTATGAATCT
Long Flanking Sequence:
TTCATTATTTCAACTATAGAAGCAATACTTCTGCATTTGAATGTTCTTTGAAATATTTGGGATAATGTAAATACACAAGTCTACAAAATATGTAATGCTGTTCTAGTGGTTTAAAGATTTTCATGCAAAAATCTTACATATTGTGATTTTAACTCAATAAAAGCAAGCATTCACATTATATTGTCAGACCTGTGCAGATAATGGCAAGTATTTAGTCATCTGTATAAATGTTTCTGTTCCTGTAGGGAATGGTGGCGGTGTCGGGCAGTCTTTCGGTTCTGTTAGACTCTATTCTATGTGCTCTTGGTCCATTAACCTGCTTAACAGCACAAGTTCCGCAGCTCAACGGCTGTCCACGAAACATTCTGGTGAGACACTTGCACAAACGGCTGCTTTTTTTTTTATACAAAAATGTTCTTTTTTCTTCACGATATTTTTTTTATTGCAATTTATTATGTAAAGTTTATTATTTTAACTGTTTTCATGATCCTTGTTTTTGC[A/C]GTCAAATACTCTGGACAACATCGCTTACATAATGCCTGGACTATGAATCTTTTTAAAGGCACTTTTAAGAGACTGGGTAACATTTGGACACATTCCCACAACACAGGACCAGACAGAGTTGTTGTTGTTTGTTTGTTTTTTTTACTTTTTTTGATCGACGGACATTCTTTGTCTATGACATGTTTTTAAAAATAGTATTTAAAATGTTAGTCTTTTTTTAATGTTGTAAAAAAAAAAAAGAGATACTATTTTAGAGAAGACTTTTGAGGTTTCTCTTTTGTGTTTGTGTCAGCGTCTCAGTATCTGTGCTAAGATCTGTTTGTGAGTGTGGTCTAATTCACATGCTTTCATAATGTCCAAAACATTTTTTGTTTGTTTTATACTGATATGTGCAGTTTTCATTTTAGGACCAAATGCTATTTTTTTCTAATTTAACATTGATTGTTAATTTATATCAACAGCAGTTTGACTGCGCTGCCATTGTTTGATGTCTTACATAT
Associated Phenotype:
Not determined