ZMP
zgc:136878
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC678521 [Source:RefSeq peptide;Acc:NP_001035338]
Human Orthologue:
NFIX
Human Description:
nuclear factor I/X (CCAAT-binding transcription factor) [Source:HGNC Symbol;Acc:7788]
Mouse Orthologue:
Nfix
Mouse Description:
nuclear factor I/X Gene [Source:MGI Symbol;Acc:MGI:97311]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa10966 | Nonsense | Available for shipment | Available now |
| sa40016 | Essential Splice Site, Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa10725 | Essential Splice Site | Available for shipment | Available now |
| sa26010 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa10966
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000044670 | Nonsense | 79 | 556 | 3 | 14 |
| ENSDART00000090235 | Nonsense | 79 | 440 | 3 | 11 |
| ENSDART00000122994 | Nonsense | 53 | 414 | 2 | 10 |
| ENSDART00000139001 | Nonsense | 123 | 485 | 3 | 11 |
Genomic Location (Zv9):
Chromosome 3 (position 14464540)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 14710047 |
| GRCz11 | 3 | 14859847 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAAAGCACGAGAAGCGCATGACGAAGGATGAGGAGCRCGCCGTCAAAGAC[G/T]AACTCCTGGGCGAGAAGCCCGAGATCAAGCAGAAGTGGGCGTCCCGTCTG
Long Flanking Sequence:
ATTTAATATTTTTAATTTACTAAAATCTGCAAAAAAAAAAAAAAATTCTTAATCTGATTTTTTTGTGTTTTTCAGTAAAAAAAAACAATTTGCTTGAATAACGCAGTTTTAAGATAATATATTTATTTTTATTTCTATCAAATTTTAAAATTCATCTTTTTGTAAAGCATAAACATTATTGACTTATTAAAATTCAAAGCATATTAAAAAATACAGATTTTCTTTTATTATTTTGGATATTTTTTTCTGGAAAAGCAAGACATAAATCTTATTTTTAGGTCTGCAAATTGTCCAACATCTTTTAATTGATCTGAAATTGCTGAAATTACATATCTGTTTTCCCTCTCCAACAGGATGAATTTCATCCCTTCATCGAGGCTTTGCTGCCACATGTCCGTGCGTTCTCCTACACCTGGTTCAACCTCCAGGCCCGTAAGCGCAAATACTTCAAAAAGCACGAGAAGCGCATGACGAAGGATGAGGAGCGCGCCGTCAAAGAC[G/T]AACTCCTGGGCGAGAAGCCCGAGATCAAGCAGAAGTGGGCGTCCCGTCTGCTCGCCAAGCTCCGCAAAGACATCCGCCCCGAGTTCCGCGAGGACTTTGTGCTCACCATCACGGGGAAGAAGCCGCCGTGCTGCGTGCTCTCCAACCCCGACCAGAAGGGCAAGATCCGCCGCATCGACTGCCTGCGGCAAGCCGACAAGGTCTGGCGCCTGGACCTGGTGATGGTTATCCTGTTCAAGGGAAGCCCGCTGGAGAGCACGGATGGAGAGAGGCTGGTCAAGTCCCCGCAGTGCTCAAACCACGGCCTCTGCGTGCAGCCGCACCACATCGGAGTGTCCGTCAAGGAACTGGACCTGTATCTGGCCTACTTCGTCCACACGCCAGGTGAGTCGCACGTACTGTAACCCACTGCAGGAAACACGGTCCGGTTCAGTTCCGGGCTCCGATCCAAAAACACAGTCGCATGCAAATATATGCAAATACGCCCTTTGTTTCTTTGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa40016
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site, Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000044670 | Splice Site | None | 556 | None | 14 |
| ENSDART00000090235 | Splice Site | None | 440 | None | 11 |
| ENSDART00000122994 | Splice Site | None | 414 | None | 10 |
| ENSDART00000139001 | Essential Splice Site | 251 | 485 | 4 | 11 |
Genomic Location (Zv9):
Chromosome 3 (position 14611412)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 14856919 |
| GRCz11 | 3 | 15006719 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCCTATGTTTAATCTGCTCTCTTTCTCTCTCTCTTTTTCCTCTCGGCTC[T/A]GCAGAATCTGGACAATCGGATAACTCCAACCAGCAAGGAGAAGCAGACAT
Long Flanking Sequence:
AAGAATTCGGAAATAAAATGTATTATGGTTTCCACAAAGATGATTAAGCCGCAAAATGTTTTTATTCTTAAAAATAGTTTGACTTAAAATATATTCAAGTTGACAAGTTATTTTAAATCATAAAAATATTTGACAATAATACAGTCTTTTCTTCAGCCTAAATGAGCTTAGGAGATTTACAGAAACGGTAAAAAATGACCCCAAGCTTTTGAACACAAGTGTTTAACAAGGTAAATTCTAACTAACAATAAGACAGAACAGCAGACTTCATGGATAAAGGTCCAGATTTTGCCTGAATATGATGTAAATGATCCAGAACTGGAGCACATTTTGCATGTCTCATTTCCAGCTGTGTCGTCTCAGCGCTACATTGAAAATGTGCTGGCAGAGAATATTGCGAATGTTCTACATCTGCTAATTGATTCAGGCACCTTTGGACTGAACCCAGCCCTCCTATGTTTAATCTGCTCTCTTTCTCTCTCTCTTTTTCCTCTCGGCTC[T/A]GCAGAATCTGGACAATCGGATAACTCCAACCAGCAAGGAGAAGCAGACATCAAGCCTCCGCCCAATGGTGGGTTTTAAATCAATGAAAATCTCACACACACAAACATCTAAACACTATTCAACACGGGAGCTTAAAGGGATAGTTCACTCAAAACTGAAAATTCTATCATCATTTACTCTCACTTTACTTGTTTCAAACCTGTTGGACTAATAATATTTGTTTCTTTTGGCTTTTGAACACAAAAGAAGATACTTTGAAGAATGTTGGAAACCTGCAATCATTGACTTCCATAGCGTTTGTTTTTCCTGCTATGGACATCTGAAATGGTTTAACTTTCTTCAAAATATCTTCTTTCGTGTTTAACAGAAGAAAGAAACTCATAAAGGTTTGAAACCACTTGAGAGAAAATAAATGCTGAGAAATTGAATATTTGGGTGAAAATTGAAACAATATTTTTGAATATTGTTTCTAAAGGCCCCAGTATACTTACAGTTCATTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10725
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000044670 | Essential Splice Site | 290 | 556 | 6 | 14 |
| ENSDART00000090235 | Essential Splice Site | 290 | 440 | 6 | 11 |
| ENSDART00000122994 | Essential Splice Site | 264 | 414 | 5 | 10 |
| ENSDART00000139001 | Essential Splice Site | 335 | 485 | 6 | 11 |
Genomic Location (Zv9):
Chromosome 3 (position 14619734)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 14865241 |
| GRCz11 | 3 | 15015041 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACAACATTAACCTGGGTCGCCGCTCCATTAYGTCCACGCCATCWACCAGG[T/C]ACACACAAYATCACACACYYTTTTCATTCTGAGCGCCAAGTGCATTCAAA
Long Flanking Sequence:
CATGCTGATTTGAGGGTCAATGCGTTTTTATTATTATCAATATTGTTTTGCTGCCTCATTTTTTTTGTGGAAACTGTGACGCATTTGTTTTCAGGACTCTTTAATGATTATAAAGATTCACATTTATTTAAAATAGAAATCTGAAATGTACAATATAAATATCATTTTTGTAATTTTTTGTTGTACTATAATTAAACAAAAATGTATAAAGAAATAAAAGCAAGCAAAAATAAAAATGCTTTTACTGTATGCGCTCATGTCACTTGAGAATCTTCAATGTTTCTGTGATTTTTACTTTATATCTGGCATTAAAGAAAGCTGTCATGTGAATAGTGATGCATGATGGGATTTATTAATCTGACTTCTCTTTGTTTTTATCTAATTTAGCACCAGTTGCCACAGCGACCGGACCCAACTTCTCTCTGGCCGACCTTGACAGTCCAGGATACTACAACATTAACCTGGGTCGCCGCTCCATTACGTCCACGCCATCAACCAGG[T/C]ACACACAACATCACACACTCTTTTCATTCTGAGCGCCAAGTGCATTCAAATTGTTAAAAATTGGGATCTTCCATGCTAAAATTTTAGAGTTACTCTGATTAATTAGTTCTGTTAAATGTAGTGATTGCTGATCTTTAGGGAACAAAACACAATGGTAGTGTTTACAGTTGTTTAAACTTTAACACAGTTTATTTGCTGTTTTTCATTTTTAAAAAGTAATTATTTTTACATTTTACTCGTTTTTTTTAACCTGTTTAAAATTCATCTTGAATAACTTTGCATACGAATAATTATATAGGGTAAGGATTAAAGATCATACTTTATTTTAAGGTTCAATTCTTGGCTATTGAAGGGATATTTTACTCAATTACTCACACTTCGCATGTCACAAATCTGTTGTTTTTTTCTGTCAAACACAATAGAAGATATTTTAAAGAAGGTTGGAAACAAGTGACCATTGACTTCCATTGTCACGGTCTCAGGAAGGCTAAGGGAGCGAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa26010
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000044670 | Essential Splice Site | 553 | 556 | 14 | 14 |
| ENSDART00000090235 | Essential Splice Site | None | 440 | 11 | 11 |
| ENSDART00000122994 | Essential Splice Site | None | 414 | 10 | 10 |
| ENSDART00000139001 | Essential Splice Site | None | 485 | 11 | 11 |
Genomic Location (Zv9):
Chromosome 3 (position 14661750)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 14907257 |
| GRCz11 | 3 | 15057057 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAATATAGTAAAACACTAACAATGCCTTTATATTATGTGTTTTTTTTACA[G/A]TCATGGTTCCTTTGACGAGGTCCTGCCTGCAACCTGTCGACACAATTTGA
Long Flanking Sequence:
TCTCTCGCACACCCCCATACTGAATGTAACTCAAAACCAAACTTGACTGATTTCTGTGAGAATCTTGGGTCCATGCGGGTTCCAATAGGTCTTCTGCAGTATTTGTGATATTCAACAGATGATTCATGTAAAAAAAAATAAAAATAAAAAAATTCGACCTTCTGCCACTTTTCCAAATGATCAACTAGAAGTCAAGTTATTATTTGTTGCTCTTACAACTAGGATCAACGACAATACTTTTGTCAAGTAGTGTGGGTGTGATGTAGAAATGTGTGCCAGTTTTTAAGTGTTACAAAACCGTGTCATATTGTTGATATTTTAATACATTTTTAAAATATTACGTTTTATAAGTATATTAGTGGTGTCATGTAAAAATGTGTGTTTAAGAGAGTTCTCAGAAATGGAGAAAAATCTGTATCATGTTGCTAAATAATGGATTGCAAAAAAGTCAAATATAGTAAAACACTAACAATGCCTTTATATTATGTGTTTTTTTTACA[G/A]TCATGGTTCCTTTGACGAGGTCCTGCCTGCAACCTGTCGACACAATTTGAAAGTTTTCTTTTTTGACAAAAAAAAAATCCTGTTTGAAAATTCCCTCCCACCCGAAACGCACCCTACGAGACGTGAGCAGAATATGATTGGGAAACGTTCGAGCATGTATTTGCCAACCGTCAGACGCCCTTCAAACCCACATGAGCAGCTCCGCTAAAGACTGTCAGATCACCGGCGGAGGAAACAGACGGACTGACACACACAAACTACAGTATCTGATCTACAGAGACACTAAATCATACTAGCAACAAGGATGTAGTGTACAATGGCCGGGATTTTCAACAGTTTCAGTGGTGAGGATTCAGACACAACAAACATGCAAGATTTGTACTCGATCCCTTATATTTTGTTTGTAATCAAAACACTTAAACGTGCTGACATTCAGCAAACAGGCGACACTAAAATTCACTAGACGTTTCACATTTATAGCGGGTGAAACGTCTGTTTAA
Associated Phenotype:
Not determined