ZMP
zgc:136878
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC678521 [Source:RefSeq peptide;Acc:NP_001035338]
Human Orthologue:
NFIX
Human Description:
nuclear factor I/X (CCAAT-binding transcription factor) [Source:HGNC Symbol;Acc:7788]
Mouse Orthologue:
Nfix
Mouse Description:
nuclear factor I/X Gene [Source:MGI Symbol;Acc:MGI:97311]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa10966 | Nonsense | Available for shipment | Available now |
| sa10725 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa10966
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000044670 | Nonsense | 79 | 556 | 3 | 14 |
| ENSDART00000090235 | Nonsense | 79 | 440 | 3 | 11 |
| ENSDART00000122994 | Nonsense | 53 | 414 | 2 | 10 |
| ENSDART00000139001 | Nonsense | 123 | 485 | 3 | 11 |
Genomic Location (Zv9):
Chromosome 3 (position 14464540)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 14710047 |
| GRCz11 | 3 | 14859847 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAAAGCACGAGAAGCGCATGACGAAGGATGAGGAGCRCGCCGTCAAAGAC[G/T]AACTCCTGGGCGAGAAGCCCGAGATCAAGCAGAAGTGGGCGTCCCGTCTG
Long Flanking Sequence:
ATTTAATATTTTTAATTTACTAAAATCTGCAAAAAAAAAAAAAAATTCTTAATCTGATTTTTTTGTGTTTTTCAGTAAAAAAAAACAATTTGCTTGAATAACGCAGTTTTAAGATAATATATTTATTTTTATTTCTATCAAATTTTAAAATTCATCTTTTTGTAAAGCATAAACATTATTGACTTATTAAAATTCAAAGCATATTAAAAAATACAGATTTTCTTTTATTATTTTGGATATTTTTTTCTGGAAAAGCAAGACATAAATCTTATTTTTAGGTCTGCAAATTGTCCAACATCTTTTAATTGATCTGAAATTGCTGAAATTACATATCTGTTTTCCCTCTCCAACAGGATGAATTTCATCCCTTCATCGAGGCTTTGCTGCCACATGTCCGTGCGTTCTCCTACACCTGGTTCAACCTCCAGGCCCGTAAGCGCAAATACTTCAAAAAGCACGAGAAGCGCATGACGAAGGATGAGGAGCGCGCCGTCAAAGAC[G/T]AACTCCTGGGCGAGAAGCCCGAGATCAAGCAGAAGTGGGCGTCCCGTCTGCTCGCCAAGCTCCGCAAAGACATCCGCCCCGAGTTCCGCGAGGACTTTGTGCTCACCATCACGGGGAAGAAGCCGCCGTGCTGCGTGCTCTCCAACCCCGACCAGAAGGGCAAGATCCGCCGCATCGACTGCCTGCGGCAAGCCGACAAGGTCTGGCGCCTGGACCTGGTGATGGTTATCCTGTTCAAGGGAAGCCCGCTGGAGAGCACGGATGGAGAGAGGCTGGTCAAGTCCCCGCAGTGCTCAAACCACGGCCTCTGCGTGCAGCCGCACCACATCGGAGTGTCCGTCAAGGAACTGGACCTGTATCTGGCCTACTTCGTCCACACGCCAGGTGAGTCGCACGTACTGTAACCCACTGCAGGAAACACGGTCCGGTTCAGTTCCGGGCTCCGATCCAAAAACACAGTCGCATGCAAATATATGCAAATACGCCCTTTGTTTCTTTGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10725
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000044670 | Essential Splice Site | 290 | 556 | 6 | 14 |
| ENSDART00000090235 | Essential Splice Site | 290 | 440 | 6 | 11 |
| ENSDART00000122994 | Essential Splice Site | 264 | 414 | 5 | 10 |
| ENSDART00000139001 | Essential Splice Site | 335 | 485 | 6 | 11 |
Genomic Location (Zv9):
Chromosome 3 (position 14619734)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 14865241 |
| GRCz11 | 3 | 15015041 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACAACATTAACCTGGGTCGCCGCTCCATTAYGTCCACGCCATCWACCAGG[T/C]ACACACAAYATCACACACYYTTTTCATTCTGAGCGCCAAGTGCATTCAAA
Long Flanking Sequence:
CATGCTGATTTGAGGGTCAATGCGTTTTTATTATTATCAATATTGTTTTGCTGCCTCATTTTTTTTGTGGAAACTGTGACGCATTTGTTTTCAGGACTCTTTAATGATTATAAAGATTCACATTTATTTAAAATAGAAATCTGAAATGTACAATATAAATATCATTTTTGTAATTTTTTGTTGTACTATAATTAAACAAAAATGTATAAAGAAATAAAAGCAAGCAAAAATAAAAATGCTTTTACTGTATGCGCTCATGTCACTTGAGAATCTTCAATGTTTCTGTGATTTTTACTTTATATCTGGCATTAAAGAAAGCTGTCATGTGAATAGTGATGCATGATGGGATTTATTAATCTGACTTCTCTTTGTTTTTATCTAATTTAGCACCAGTTGCCACAGCGACCGGACCCAACTTCTCTCTGGCCGACCTTGACAGTCCAGGATACTACAACATTAACCTGGGTCGCCGCTCCATTACGTCCACGCCATCAACCAGG[T/C]ACACACAACATCACACACTCTTTTCATTCTGAGCGCCAAGTGCATTCAAATTGTTAAAAATTGGGATCTTCCATGCTAAAATTTTAGAGTTACTCTGATTAATTAGTTCTGTTAAATGTAGTGATTGCTGATCTTTAGGGAACAAAACACAATGGTAGTGTTTACAGTTGTTTAAACTTTAACACAGTTTATTTGCTGTTTTTCATTTTTAAAAAGTAATTATTTTTACATTTTACTCGTTTTTTTTAACCTGTTTAAAATTCATCTTGAATAACTTTGCATACGAATAATTATATAGGGTAAGGATTAAAGATCATACTTTATTTTAAGGTTCAATTCTTGGCTATTGAAGGGATATTTTACTCAATTACTCACACTTCGCATGTCACAAATCTGTTGTTTTTTTCTGTCAAACACAATAGAAGATATTTTAAAGAAGGTTGGAAACAAGTGACCATTGACTTCCATTGTCACGGTCTCAGGAAGGCTAAGGGAGCGAG
Associated Phenotype:
Not determined