ZMP
si:dkey-181m9.9
Ensembl ID:
ZFIN ID:
Description:
U2-associated SR140 protein-like [Source:RefSeq peptide;Acc:NP_001184003]
Human Orthologue:
AC018450.1
Human Description:
U2-associated protein SR140 [Source:UniProtKB/Swiss-Prot;Acc:O15042]
Mouse Orthologue:
2610101N10Rik
Mouse Description:
RIKEN cDNA 2610101N10 gene Gene [Source:MGI Symbol;Acc:MGI:1915208]
Alleles
There are 6 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa25819 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa39842 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa32928 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa1800 | Missense | F2 line generated | Not yet available |
sa39841 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa30820 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa25819
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087714 | Nonsense | 359 | 750 | 9 | 18 |
ENSDART00000132651 | Nonsense | 577 | 923 | 17 | 25 |
ENSDART00000132854 | None | None | 277 | None | 9 |
The following transcripts of ENSDARG00000061490 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 26779217)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 26975413 |
GRCz11 | 2 | 26631047 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGATATTTTCTGACCTAAATGCTACTTATAAGACAATACAGGGCCATTTA[C/T]AATCAGAAAATTTTAAGGTAAGCGGTCTGTCTCTTAAATTTAACACACTT
Long Flanking Sequence:
ATATTCTAATCTGCTGCAGGGAAAGGGATAAATTAGAGGAGCTGCTTCGGGGTCTCACGCCGAGGAAGAGTGACATTGCAGGCGGGATGTTTTTCTGCCTCACTCATGCTGATGCGGCTGAGGAGATAGTGGAGTGCATCGCAGAGTCTCTGTCCATACTCAAAACCCCTCTGCCAAAGAAGGTCACCCTTATGCTGCAGAATTAACATTAATAGATTTTTGCTTGCATTGCGGAACTTTTGTTTACATCTGCATTTCTGTCCTCCCTCAGATTGCAAGGCTATATTTGGTGTCGGATGTGCTTTATAACTCATCTGCAAAAGTTACTAATGCCTCCTATTACAGAAAATTGTAAGTATATTTAAGTGTCAATTTAAGTTACTTGTTCTTGTCTGTTTATTCAATGTTTTTTGTCTTCTTTCCTTTACAGCTTTGAAACAAAACTATGTCAGATATTTTCTGACCTAAATGCTACTTATAAGACAATACAGGGCCATTTA[C/T]AATCAGAAAATTTTAAGGTAAGCGGTCTGTCTCTTAAATTTAACACACTTTTCGTCTACACTTTAAACTGTCTGGAAATTTCTTAATTTTGATTTCTGTCTTTACAGCAACGAGTAATGTCCTGTTTCCGTGCGTGGGAAGAATGGGCAGTTTATCCTGATCCATTTCTGATCAAACTTCAGAACATTTTCTTAGGACTGGTCAGTCTTGATCCTGAAAAGGAGCCTGAAGAGCTTGTGCCAGAGGTTAGATTGAATTATCATTTCTAGAGTTTAAGAAAGCTATCTTGTCTCATCTAACATGTGCTCAATGATTAAGTGGTTATTGCATTTTTGCTTAGCTACCAGAAAAGGTGGAGGACATTGATGGTGCTCCGATTGTGGAGGAGGAGTTAGATGGTGCTCCTTTGGATGACGTTGATGGGATGCCCATCGATGGAGCCCCAATTGATGGTGCATCGATGGATGACCTGGATGGAATGCCCATTAAAGGAGCAGATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39842
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087714 | Essential Splice Site | 364 | 750 | 9 | 18 |
ENSDART00000132651 | Essential Splice Site | 582 | 923 | 17 | 25 |
ENSDART00000132854 | None | None | 277 | None | 9 |
The following transcripts of ENSDARG00000061490 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 26779199)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 26975395 |
GRCz11 | 2 | 26631029 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGCTACTTATAAGACAATACAGGGCCATTTACAATCAGAAAATTTTAAG[G/A]TAAGCGGTCTGTCTCTTAAATTTAACACACTTTTCGTCTACACTTTAAAC
Long Flanking Sequence:
GGGAAAGGGATAAATTAGAGGAGCTGCTTCGGGGTCTCACGCCGAGGAAGAGTGACATTGCAGGCGGGATGTTTTTCTGCCTCACTCATGCTGATGCGGCTGAGGAGATAGTGGAGTGCATCGCAGAGTCTCTGTCCATACTCAAAACCCCTCTGCCAAAGAAGGTCACCCTTATGCTGCAGAATTAACATTAATAGATTTTTGCTTGCATTGCGGAACTTTTGTTTACATCTGCATTTCTGTCCTCCCTCAGATTGCAAGGCTATATTTGGTGTCGGATGTGCTTTATAACTCATCTGCAAAAGTTACTAATGCCTCCTATTACAGAAAATTGTAAGTATATTTAAGTGTCAATTTAAGTTACTTGTTCTTGTCTGTTTATTCAATGTTTTTTGTCTTCTTTCCTTTACAGCTTTGAAACAAAACTATGTCAGATATTTTCTGACCTAAATGCTACTTATAAGACAATACAGGGCCATTTACAATCAGAAAATTTTAAG[G/A]TAAGCGGTCTGTCTCTTAAATTTAACACACTTTTCGTCTACACTTTAAACTGTCTGGAAATTTCTTAATTTTGATTTCTGTCTTTACAGCAACGAGTAATGTCCTGTTTCCGTGCGTGGGAAGAATGGGCAGTTTATCCTGATCCATTTCTGATCAAACTTCAGAACATTTTCTTAGGACTGGTCAGTCTTGATCCTGAAAAGGAGCCTGAAGAGCTTGTGCCAGAGGTTAGATTGAATTATCATTTCTAGAGTTTAAGAAAGCTATCTTGTCTCATCTAACATGTGCTCAATGATTAAGTGGTTATTGCATTTTTGCTTAGCTACCAGAAAAGGTGGAGGACATTGATGGTGCTCCGATTGTGGAGGAGGAGTTAGATGGTGCTCCTTTGGATGACGTTGATGGGATGCCCATCGATGGAGCCCCAATTGATGGTGCATCGATGGATGACCTGGATGGAATGCCCATTAAAGGAGCAGATGATGATCTGGATGGAGTTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32928
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087714 | Nonsense | 547 | 750 | 14 | 18 |
ENSDART00000132651 | Nonsense | 765 | 923 | 22 | 25 |
ENSDART00000132854 | None | None | 277 | None | 9 |
The following transcripts of ENSDARG00000061490 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 26775427)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 26971623 |
GRCz11 | 2 | 26627257 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCAGTGCTGCGGACCAGCAGTCCTACAGTAATCCTGTTAGAGAAGAGTA[T/A]GATTTAAAGTCTGCAAAGTTTTCTGAGACGAGCGAGGAGAAGCGTGCCAA
Long Flanking Sequence:
CAAATTGCATCATAATGTTCTTAATTAATATCCTGTCATACAACTAGAATCTGAGAACAAGCCACTGCAATGATGCAAACCAAATATGAAAAAGGAGTAAATGAGAACAGGCTACTAATAATTCAACTCCCACTGAACCTTTAATTACACTTGCTTATAAAAAAATATATTGCACATTAGACAGCAAGCTAAAGCTAAAACTGTGAGCTAAAACAAGCTTTGATATCTAACTGCTATCAATCAGAGAAGATTAAAGACCTATGAAAACGATCATTGTACAACAGATTTATGCTCTTCACTTATCAAATAGGATAAAACTTGTAAGTTGTATCAGCTACAAAAATCTTGTTTGTGCATCATAAAGAACTTTTGTTGTTTTTAGCTAATTTATTGTCACTTTCTTATCATAGCACAAAAAGTGAAGCAGAGGGCAAAAACTCCCACAAGAGCTCCAGTGCTGCGGACCAGCAGTCCTACAGTAATCCTGTTAGAGAAGAGTA[T/A]GATTTAAAGTCTGCAAAGTTTTCTGAGACGAGCGAGGAGAAGCGTGCCAAACTACGTGAAATTGAGGTACATTAAAATCCTTGATGCATTAAACATACTGCAGTACAATCTTTAATCTGTTTGGGGATCATAATCAGTTTCCTTTGTATTACAGCTTAAAGTCATGAAGTTTCAAGATGAGCTTGAATCTGGAAAACGGCCCAAAAAATCTGGACAGAGCATTCAGGAGCAAGTAGAGCTTTACCGGGATAAGTTACTACAGCGGGTTAGTATCAGCTTTCCTGTTTGACATTTTGTTTAGTGTATGTTGGTTTGTTTTTAAACTGTGGATGCTGCGATTGATTGACTGAAGATCGATATCGGCTGATAATCACATGTAATGACTAAATCGGTACTTATCAATCTGGCTGACCTCATGAACCGATCGCAGGGTTTTTTTATGAGGTCACAAGCAGAGAAAGATGCTTGTGTGCTCCTGTATATTTTGATTATGCTATACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1800
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Missense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087714 | Missense | 642 | 750 | 16 | 18 |
ENSDART00000132651 | Missense | 860 | 923 | 24 | 25 |
ENSDART00000132854 | None | None | 277 | None | 9 |
The following transcripts of ENSDARG00000061490 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 26772857)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 26969053 |
GRCz11 | 2 | 26624687 |
KASP Assay ID:
554-1792.1 (used for ordering genotyping assays)
KASP Sequence:
AAGACAAAGAGAAATCGGACGTGTTCCACAAAGAGAAAGACAAAGATGAA[T/A]CCACACCGGGTAGAAAAGAAAAGTAAGAGGAGATCTCAAATATTTCCCCT
Long Flanking Sequence:
TTAAGATCGCCTGTGCATGCATATTGGACCATCCTTATTGTCAAACCCTGCTTTTAAGAATTATTATGCAGAAAAATTATTTTTACCAGCCAAAGTGTCTAGTGGGAATGTCTCTTTTACCCCCACCGCTGAAATCTACCCGCATTTGGCGGGTATTAATGTCAAGCCCTGATTACATGCAGCGGCCTTTATTTATTTTCTTAGCTAAAGCAAGATGTCCACTTAAGTATCATACTTAGGGAAAATGTGCTCAATGCATTATAAATCTTGAAGCATTAGAATCGGTTCACTATATCGGCCGATCATCATGACAAAGAATCAGTACTCTGGATTGGCTGCAAAAGTCCTGATTGGAGCATCCCTATTTTAAAGCATTGTTTTTGCACATTGTTCAGGAGAAGGAGAAAGAGACGGAGAAAGACAAAGAGAAAGAAAAAGAAAAGGAGAGAAAAGACAAAGAGAAATCGGACGTGTTCCACAAAGAGAAAGACAAAGATGAA[T/A]CCACACCGGGTAGAAAAGAAAAGTAAGAGGAGATCTCAAATATTTCCCCTGTGAAACTGAGACATTTTTCAGTGCGTTCATTGCTGTTTCACTCTACCACCAGGAAACGGAGGCACAGTCCATCCCCCAGCCCGACACGAAGCAGCAGCAGCAGACGGGGCAGATCACCTTCGCCCCGATCAGAGCGCTCCGATAGATCCTACACAAGAGACAGCTCACGATCAGCTTATAAAGACTCTCCAAGAGAAAGCAACCGCAAGTCATCTAAAAGGTAAACTTCATTTCTTTTAGTTGGAGTTGGTCCGTCTCAGTCAGTACATGCATCGTTTTGGAATGGGCTATATGCACAGACTTTTAATTTCAGCGAGCCAGCCTTAGCACTTCCGGTGAACTGTCTTTCTGATATAAAATTGCCACACTTCAGGTCTGATTTCTTTAAAAATTTTCTCTGACTGATAGATATACGATATGAAGTGGGTCTCAGACCGGACTAGAAGCAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39841
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087714 | Essential Splice Site | 705 | 750 | None | 18 |
ENSDART00000132651 | None | None | 923 | 25 | 25 |
ENSDART00000132854 | None | None | 277 | None | 9 |
ENSDART00000087714 | Essential Splice Site | 705 | 750 | None | 18 |
ENSDART00000132651 | None | None | 923 | 25 | 25 |
ENSDART00000132854 | None | None | 277 | None | 9 |
The following transcripts of ENSDARG00000061490 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 26772043)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 26968239 |
GRCz11 | 2 | 26623873 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CATATACCTCGTTACACTCAACCTAATGTCTTGTTTTTAAATGTGATTTC[A/T]GATCTCCTTCACCTCCAAGAACCCCCAAGAGGTCGCGCAGATCCAGATCA
Long Flanking Sequence:
AGTACATGCATCGTTTTGGAATGGGCTATATGCACAGACTTTTAATTTCAGCGAGCCAGCCTTAGCACTTCCGGTGAACTGTCTTTCTGATATAAAATTGCCACACTTCAGGTCTGATTTCTTTAAAAATTTTCTCTGACTGATAGATATACGATATGAAGTGGGTCTCAGACCGGACTAGAAGCATTGCATTAAATTTTCCCCCGTCAGGTCTTTAAAATATGATTTCATTTTACCCCAGTATTTTTAATGAAGTTTCTGCGCTCGTCTGCTGATCCTGATGGTGCTAGCGATTACACAGTCTTTCATCTCATTTAATGCTTGATCAACTAAATGAATGCTTAAGTCTATTTAACTAAATGTATTTGAATGAAATTACAACATCGATGCTGTAAATGGAGCCTTATAAAATGGAAAATAGTCATCATTGGCTGAAAAACACTAGCTGTGCATATACCTCGTTACACTCAACCTAATGTCTTGTTTTTAAATGTGATTTC[A/T]GATCTCCTTCACCTCCAAGAACCCCCAAGAGGTCGCGCAGATCCAGATCAAGAACGCCCAAAAAAGCCTCAAAGAAATCCAGATCGCGGTCACGATCACCCCATCGCTCGCACAAAAAATCCAAAAAGAGCAAACACTGAGAGATTATCAAATGATGCCTGGGTTGTCTTTTGTGCCTCAAATTTGTCCTGCAAATCATTGTGAGGGACATTCCCTCTTTCAGCCCTCCTGGTTTTGAATCTCATTCACACACAGTGTTCAAGGCTCATCTATAGGCTGTTTTATGACATCATCTAGGAGATTCCGTTGATGTTCCATGTGTCCGAAAACAAAATAACTGCAGGGGTTGGGGCAGTCATCCATCAATATGAAAATTTTTCTTTTTTTTTTTTCCTTTTTGTCATTGTTTTTAGATCCCATGAAACTGACTTAAATTAAAATAGTGTAAGTTTCAGTTGTATAGATGTTTGCTTTTCAATAAAGACAATTTATGTGACTCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa30820
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087714 | Essential Splice Site | 705 | 750 | None | 18 |
ENSDART00000132651 | None | None | 923 | 25 | 25 |
ENSDART00000132854 | None | None | 277 | None | 9 |
ENSDART00000087714 | Essential Splice Site | 705 | 750 | None | 18 |
ENSDART00000132651 | None | None | 923 | 25 | 25 |
ENSDART00000132854 | None | None | 277 | None | 9 |
The following transcripts of ENSDARG00000061490 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 2 (position 26772043)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 2 | 26968239 |
GRCz11 | 2 | 26623873 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CATATACCTCGTTACACTCAACCTAATGTCTTGTTTTTAAATGTGATTTC[A/T]GATCTCCTTCACCTCCAAGAACCCCCAAGAGGTCGCGCAGATCCAGATCA
Long Flanking Sequence:
AGTACATGCATCGTTTTGGAATGGGCTATATGCACAGACTTTTAATTTCAGCGAGCCAGCCTTAGCACTTCCGGTGAACTGTCTTTCTGATATAAAATTGCCACACTTCAGGTCTGATTTCTTTAAAAATTTTCTCTGACTGATAGATATACGATATGAAGTGGGTCTCAGACCGGACTAGAAGCATTGCATTAAATTTTCCCCCGTCAGGTCTTTAAAATATGATTTCATTTTACCCCAGTATTTTTAATGAAGTTTCTGCGCTCGTCTGCTGATCCTGATGGTGCTAGCGATTACACAGTCTTTCATCTCATTTAATGCTTGATCAACTAAATGAATGCTTAAGTCTATTTAACTAAATGTATTTGAATGAAATTACAACATCGATGCTGTAAATGGAGCCTTATAAAATGGAAAATAGTCATCATTGGCTGAAAAACACTAGCTGTGCATATACCTCGTTACACTCAACCTAATGTCTTGTTTTTAAATGTGATTTC[A/T]GATCTCCTTCACCTCCAAGAACCCCCAAGAGGTCGCGCAGATCCAGATCAAGAACGCCCAAAAAAGCCTCAAAGAAATCCAGATCGCGGTCACGATCACCCCATCGCTCGCACAAAAAATCCAAAAAGAGCAAACACTGAGAGATTATCAAATGATGCCTGGGTTGTCTTTTGTGCCTCAAATTTGTCCTGCAAATCATTGTGAGGGACATTCCCTCTTTCAGCCCTCCTGGTTTTGAATCTCATTCACACACAGTGTTCAAGGCTCATCTATAGGCTGTTTTATGACATCATCTAGGAGATTCCGTTGATGTTCCATGTGTCCGAAAACAAAATAACTGCAGGGGTTGGGGCAGTCATCCATCAATATGAAAATTTTTCTTTTTTTTTTTTCCTTTTTGTCATTGTTTTTAGATCCCATGAAACTGACTTAAATTAAAATAGTGTAAGTTTCAGTTGTATAGATGTTTGCTTTTCAATAAAGACAATTTATGTGACTCC
Associated Phenotype:
Not determined