Busch Lab

ZMP

atr

Ensembl ID:
ENSDARG00000079625
ZFIN ID:
ZDB-GENE-070912-458
Description:
Novel protein similar to vertebrate ataxia telangiectasia and Rad3 related (ATR) [Source:UniProtKB/T
Human Orthologue:
ATR
Human Description:
ataxia telangiectasia and Rad3 related [Source:HGNC Symbol;Acc:882]
Mouse Orthologue:
Atr
Mouse Description:
ataxia telangiectasia and Rad3 related Gene [Source:MGI Symbol;Acc:MGI:108028]

Alleles

There are 9 alleles of this gene:

Allele Name Consequence Status Availability
sa19711 Nonsense Available for shipment Available now
sa14005 Nonsense Available for shipment Available now
sa15319 Essential Splice Site Available for shipment Available now
sa32869 Essential Splice Site Available for shipment Available now
sa14645 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa19711
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111604 Nonsense 106 2651 4 48
ENSDART00000144801 None None 2064 None 40
ENSDART00000144988 Nonsense 104 391 4 4

The following transcripts of ENSDARG00000079625 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 16265705)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 16776532
GRCz11 2 16445122
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTATAACCATCATAGATTGACCGTCTACTTCTCCCTTCCCAGATTTCACT[A/T]AATGGATCATTAATCGCCTCTTACGAATTGCTGCTTGCCCAGAATGTGAA
Long Flanking Sequence:
AAAAGAGCATATTTTAGAGCAGTAATCACAATACAGTGATATTGTGAAACCATGATATTTTTATCCAAGGTTATCATACTGTCAGAATCTTATACCAGCCCATGTCAAATCGCTAAACCAGATGAGTACTTTCTATATGCCAATATAAAGCCATGTAATACAAAACAATACTGATGATGCAGAAGGAATTCAAAGTGTTCTTCCCGGTCAAAAATAGCTGCACAAATTGAAAAAAAAAGCAAGCTTCCCAGAAGGCTGTGCCATTTGCTGAATTTTGTGTTCAATCCAGCGATGACAGAATCCCAAAATTCTGAATGAACACAACAGCTCATTATATTATATATTCATTATAAGTAATAGAAATTCAGCTTTTTAGTGATTGAAAGTCATGCAGTTTAGCATAATGTTTAGAGTGGGAACCTTGGACTGGTTTGTGGTCCAGGATCACAAGTATAACCATCATAGATTGACCGTCTACTTCTCCCTTCCCAGATTTCACT[A/T]AATGGATCATTAATCGCCTCTTACGAATTGCTGCTTGCCCAGAATGTGAAGACCTTCACATGAAGATCTCCTCAGTCATCTGTTCATTGCTTCATCTATTCAGAGCCAAGGCTCCAGTCGTGTTTAGCCTGTTTTCCACTGAGCTGATTTGTCTAATACAAGATCTGGTGCATAAGAACCTCATGACCCGACCATCACCACAGTGGCCAGTGGTGGTGGAGCGATTCTCCATCAAGTCTGGAGAGTCTGCCGTTTACTTGACTCCCACTATCCTCCAGCTGTCCTCTCTATCCTCAACTCAGGCATTGTTAGCAACATCATTAAGAGTTCTGACAGATGTTATTCAAGGCCTTTTCTTTCCAAGAGAAGTGGGCATTATATGGGACTCTACCTGTCTCATGCTGTCTAATGGAAGCCCCAAGCTCAAGGCAGTGTCCATGGTGCTTTTAACTCGCATTGTGACTCTAGGAGGCTTCCCCGAAGACCATTCACAGCCCTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14005
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111604 Nonsense 475 2651 6 48
ENSDART00000144801 None None 2064 None 40
ENSDART00000144988 None None 391 None 4

The following transcripts of ENSDARG00000079625 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 16263339)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 16774166
GRCz11 2 16442756
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAAGAGCAGAAGTGAGGTTTGGGCAGCTGTAGACTGTCGTCTGGAGGAGT[T/A]ACTGWCACAGATGAGAAACCATACAGTGAGCCAATGCGTGAGTGCGGTTC
Long Flanking Sequence:
AGTAAATGGTGAGGGAACGTTCATTTATGGGTGAACTATCTCTGTAATTATTTTAAATTTCTGAAACGCAGTAACTCAAATCTCATTCTCACTTATTTTAATTGAGGTTTAAAGTCATGTCGTGCTAAGGTATTGCTGTGTTCATGCAATTTACTTATTTTCTGTTGCATGAAATCTAGCAAAGCTTAGAAGGCTACCTGTATGCTGCCCTGAAGACAGACGCCATCGCTGCAATGCAGGACGTTCAGGCCAGTGTTTCTGATCCTGCTGATCCCAGAATGTATGAAGAAGAGCTTCCAGCCAAAAGACCAAACCTCTCTCTTCCAACCCAACTGAGGAGCAGGGACAAAACTCAGCCAATGTATATATTTTTCTCTATTTCTTGACATTCCCTCAGTTTTTCCTTTTATCATGTGTATTCATGTTGTCCACCATCAGGCAGGTGGACATGAAGAGCAGAAGTGAGGTTTGGGCAGCTGTAGACTGTCGTCTGGAGGAGT[T/A]ACTGACACAGATGAGAAACCATACAGTGAGCCAATGCGTGAGTGCGGTTCAGGGACTTGCGGTGATCTTTCATCTGGCCGCACTTTGCTCAGAACACTCTCTGAAGGGACCACAGAGGTATGGTTTAATGTAAAGGGCTCTATTTTAACGATCTAGGTGAAAAGTCTAAAGCGCAGGGCGCAAAAGCATTAAGGGTGTGTCCGAATCCACTTTGTCTATTTGCTATTTTGTGCATGGCGCACTTTGTAAGTGGAAAAACTAAGTACTTCACTAGCGAGAAAACAGTTAAACAGACCATCTGCAGCAAGGATAAAGAACGAGCCTCCTCTATTCAGCCTCTTTACATTCTATTTATTTTACTTTTACTCTTTACTCCTTTACTTTCATGGATAAGAAAATGGTGTTGTACGCACTCCATTGAAAGACATCCATTAGCCTACATATTTAAGTTTAAGCGCAAATATTTGTTTTAAATCTATTTCTAAATTCAGTTCTAATTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15319
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111604 Essential Splice Site 1509 2651 26 48
ENSDART00000144801 Essential Splice Site 922 2064 18 40
ENSDART00000144988 None None 391 None 4

The following transcripts of ENSDARG00000079625 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 16234522)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 16745349
GRCz11 2 16413939
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAAGTTCTCWGACTGGTCTGCAACATGGGYCGGATATCTCATCAGTAAAG[T/C]AAGTGCAAATYCTCACRTTTTCCTGGAGTCTCATATAWACAGAAAAAGCT
Long Flanking Sequence:
AGTCTTTAAAAGTCTTAAATTTGATTTGAGGAAACCTGCAGAAACCCTGTGTGTACGAGTATAAAGTAGGAACATCAGAACTCACAAGACAACCTTTCACCTCGACAAGAAATGTCGTCACCATTTATTCTCACAAGATCTCATAACACAAGATCTCAACACATGAATGTGTGAGAACAACAGAAGATCAAAATGTGAGCTACGTATAGAAATGTAAATATATATCTATGTAAATATATTATCTTAATTTTAAAGCACCGTCAAACAAAACTTTGCAAGCTCAACCTTTAGTGCGAATGAGGCCCAACTTTTAGTCATGCTGCTTTTCTAGTCTACATCTAGTGTGCATAAAACTCACTTATTTTATTCATCTAAAAGGTATAAGAGCTCTCAGAAGGTGGTGAATTGGTCAAAGTTGAAAAAGCCGATATATCTCAGCAGCCGCGGAAGCAAGTTCTCTGACTGGTCTGCAACATGGGCCGGATATCTCATCAGTAAAG[T/C]AAGTGCAAATTCTCACGTTTTCCTGGAGTCTCATATATACAGAAAAAGCTAATTCTCTTTAATCCATTTTGTGTTTTAGGTTAGACATGAACTTGCTGGGAAAGTGTTCAACTGTTGTAGTTTCATCATAAAGCATGATTATAAAGTGACCATATACCTGCTGCCGCACATTTTGGTCTATGTGCTGATTGGATGCACTCAGGAGGAGCAGCGAGAGGTACACATTCAAGCTCTGTTGTTTTCTATATTCTGTAATCCTAAAACAATTCAATTCAATCACCTTTATTTGTATAGCGCTTTTACAATGTAGATTGTGTCAAAGCAGCTTCACATAAAAGATCATAGTAAATTGAAACAGTTTTCAGTGTTTAAGTTCAGTTCAGTTTAGCTCAGTTCAGTGTGGTTTAATAATCATTACTGAGAGTCCAAACACTGAAGAGCAAATCCATCGATGGGCAGCTCTACAGATCCCAAACCATGCAAGCCAGTGGCGACAGCGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa32869
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111604 Essential Splice Site 1682 2651 29 48
ENSDART00000144801 Essential Splice Site 1097 2064 21 40
ENSDART00000144988 None None 391 None 4

The following transcripts of ENSDARG00000079625 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 16230941)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 16741768
GRCz11 2 16410358
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTATCCGGGAGAAGAAGCAGAACATCCAGGACCATCTTTCATTCCTACAG[G/A]TCTTACCACTCCACAGCTTTAAAAAAAAAAAACCTGTTTCATGTACAATA
Long Flanking Sequence:
ATAATATTTTGACTAGAATGTATGAGTAACCGAGCAGCATGTATTTTGAAATATAGTGTTGTTGTAAGATGCATATCTTCAATAATATTTTTAATTAATTAAAAAAAACCACACAATTTCTTCCAAAAAGGACAAAAACATACTAAATAAGTTTGTATTTTTTTTTTTTTTTTTTTTAGGATTGACGAGCAATTTAACCCAGGAAAATAGTTTAGATTAATGCCTTTTGTCTGTTTTAAAGTCGATGTTACATCTTATCAAATCTTTTGAATTAGTTGATATTAGTTAATATTAGTTGTATGTCTGACTCTTTCTTCTTCCGCTTAGGTCCAGAGAACAGCGAGTATCAAAGTGTAGTAGCTTTCCTCAACAGTATTCCTCAGGATGTGCTGGCCAAGGCCTCCTTCCGCTCCAGAGCTTACACTCGTGCCGTCATGCATTTTGAGTCCTTTATCCGGGAGAAGAAGCAGAACATCCAGGACCATCTTTCATTCCTACAG[G/A]TCTTACCACTCCACAGCTTTAAAAAAAAAAAACCTGTTTCATGTACAATATTTCTATTATTACTTATTAAATTACATGTCTAGAAATCATATAAGCTCTTAAAATATCCATATTTTGGTAGGTCCCCTAGAGTTAAAGTTGAGTTTTACCATTTTTTAATCCATTCAGCCGAAGGACAAAAATCTAACTACTCGTTTAATTCAAGACATGATTTGATTATTCATTGAAGATACTGTATTGGACACACAAGACATCTAATCAATGGAGAAGTTTACATCAAAAGGCCAATATTGTTAAAGCAACCACAACTTTCAAATATATGTTTGAAAAGCGCTATTTTAATGTTATCAGACAACAATTCTTCAAAAAACGTTTTGTTTATCAAAAGTAGATCTTAAATAAATCAGTTTTGTATCTTATTTTTTATATTTGATGTATTGTAGTATGTATAATTGTATGTATAAATGTATATTTATTGTTAGAAAACTTCATTATAGAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14645
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111604 Essential Splice Site 2594 2651 47 48
ENSDART00000144801 Essential Splice Site 2007 2064 39 40
ENSDART00000144988 None None 391 None 4

The following transcripts of ENSDARG00000079625 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 2 (position 16208501)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 16719328
GRCz11 2 16387918
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTTTCTCAAAGACTCAAGTCAATGAATCTGGAGAGATCCTCAATGARAAG[G/A]TACTTCATCYGTTAATTGCTCAAGGCTGARTGAGGRTCCTTATSTGTRAT
Long Flanking Sequence:
TCAACCTTAATAAAACAAAGCATTACTCACATATAAATGAATCTTTTATATGTGCATAAAACTATTTAATTTATTGTTTTATGATGTTAAATAAGCTCATTTGTCTGCAATTTTTGTTGTCTGTGTTTTTTTTTTGTTTGTTGATTGTGCAGTGGTGTAATGGCAATGTAGTATTATATTCACAAATTTTCAGCACTTTCAGTCATTAAGTGTAATTAGATATTAAAATCAATTTGTTACCATATATTATATTGCATGAACTATAAAATGTACAGTAGAAAGCTTAAAAAACATATCAGATCTTTATTCTATGTTGTGTTTTAATTTGAGTAATTTCTAACTGTATTTGTATTTTATTGTAACTGCATAATTATTTCTTTTTATTCCCAACCAGCGTTTTAAAAACATTCCTGCACGATCCTTTAGTGGAGTGGAGTAAACCTGTGAAGGGTTTCTCAAAGACTCAAGTCAATGAATCTGGAGAGATCCTCAATGAGAAG[G/A]TACTTCATCCGTTAATTGCTCAAGGCTGAGTGAGGATCCTTATGTGTAATGTAAATCATGCATGCTTTTGTGTTCAGCTATCCAAACATTGAATTCTAAACATAACATGGACATAACCATCGTTAAGTACACAAGTGCCTTTGTTTATGTGCATTTTATTCATTCATTCATTCATTCATTTTCTTGTCGGCTTAGTCCCTTTATTAATTCGGGGTCGCCACAGCGGAATGAACCGCCAACTTATCCAGCAGGTTTATACGCAGCGGATGCCTTTCCAGCCGCAACCCATCTCTGGGAATCATCCAAACACATATTCACACACACACTCATACACTACGGACAATTTAGCCTACCCAATTCACCTGTACCACAAGTCTCTGGACTGTGGGGGAAACCGTGGCACCCGGAGGAAACCCACGCGAACTCAGGGAGAACATGCAAACTCCACATAGAAACGCTGACTGAGCCTAGGTTGAACCAGCGACCTTCTTGCTGTGAGG
Associated Phenotype:
Not determined