ZMP
ss18
Ensembl ID:
ZFIN ID:
Description:
protein SSXT [Source:RefSeq peptide;Acc:NP_956038]
Human Orthologue:
SS18
Human Description:
synovial sarcoma translocation, chromosome 18 [Source:HGNC Symbol;Acc:11340]
Mouse Orthologue:
Ss18
Mouse Description:
synovial sarcoma translocation, Chromosome 18 Gene [Source:MGI Symbol;Acc:MGI:107708]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa39745 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa39745
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000011919 | Nonsense | 306 | 368 | 8 | 10 |
Genomic Location (Zv9):
Chromosome 2 (position 2371703)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 2 | 2239355 |
| GRCz11 | 2 | 1351773 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGGCCCGCCTCAGCAGCAGGGTTACCCACCGCAGCAGCAGTACAGCGGG[C/T]AGCAGGGATACCCGGGACAGCAGCAGGGCTACGGTACGAACACACCGACG
Long Flanking Sequence:
TGTTTGAAAACTAGCCTAGAATGCTGTTAAAAACTAGCTTTGAGCGCCGTCTGCTGTTAAAAACTAGCCTAGAGTGACATCTGCTGTTTAAAAACTAGTCTAGAGCGCTGTCTGCTGTTTAAAAACTAGTCTAGAGCGCTATCTGCTGTTTAAAAAGTAGTCTAGAGCGCCATCTAATGTTTGAAAACGAGCCCAGAATGCTGTTAAAAGCTAGCCTAGCCATTTACTGTTTATAAACTAAGCTCTGAATTGATTCAAGAGTGAAAAGTGGTGCATTTTGAAAATCTCAGAAATGATTTCTTAAGCAAATTTGCCACAGCTCCATATTCCTCTATTTCCACCAGCAATAGCTGCTTCGCTCGGCCCCGTAACTAGTGTAGTTTGCTGAAGTGTGTGGTAATCTTCCTGTAGGAAACACACAGTATGGTCAGCAGCAGGAGGCATATCAGCAGGGCCCGCCTCAGCAGCAGGGTTACCCACCGCAGCAGCAGTACAGCGGG[C/T]AGCAGGGATACCCGGGACAGCAGCAGGGCTACGGTACGAACACACCGACGGATCCAGCACTGTGTCCATTCACGCAGATGCTTCATACAAACATACTCCTGCTATTCAAAGTGTAGTTTAGATGAAGAGATGACATGATCAGAATAAAGTAGATCAGGGATGGGCAACAGCGGTCACTGTCCTGTAAAGTAAAAGGATAGTTCACTCAAAAAGTACAGTTCTGTCATTTCCTCATCCTTTACTTGTTTCAAACCTTTGCATTTCTTTCTTTGATCACAAAAGAACATATTTAGAAAATAAAATAAAACCTGTAACTATTGACTTCCATAATATTTGTGATTCCTACTGTGGAAGTCAATGGGCTTCAGCTTTTTTTAAATTAACTTCTCTTGTGCTCAACAACACAACATCTGGAACCACTCGAGGGTGAGTAAACAGTGAGTAAATGCTCAATTTTGGGTGAACTATCACTTTAACTCCAACCCTAATCAAACAAAGCT
Associated Phenotype:
Not determined