ZMP
rad23a
Ensembl ID:
ZFIN ID:
Description:
UV excision repair protein RAD23 homolog A [Source:RefSeq peptide;Acc:NP_001003739]
Human Orthologue:
RAD23A
Human Description:
RAD23 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:9812]
Mouse Orthologue:
Rad23a
Mouse Description:
RAD23a homolog (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:105126]
Alleles
There are 5 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa30805 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa39696 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa39697 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa30806 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa32770 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa30805
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000041265 | Essential Splice Site | 140 | 362 | 3 | 10 |
| ENSDART00000041265 | Essential Splice Site | 140 | 362 | 3 | 10 |
| ENSDART00000041265 | Essential Splice Site | 140 | 362 | 3 | 10 |
| ENSDART00000041265 | Essential Splice Site | 140 | 362 | 3 | 10 |
Genomic Location (Zv9):
Chromosome 1 (position 52616187)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 51487136 |
| GRCz11 | 1 | 52121261 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCACGAGACGACCCTCCGGCTACGGTCTCTCCTGCACGCAGTCCTGACGG[G/A]TTAGACACAAGACAAATAATTTAACTAGACATTTTTCTGTGTGGAAGTGA
Long Flanking Sequence:
AAATGCCAACTGACCCAGCCGAGGCTCAAACCAGCGACCTTCTTGCTGTGAGGCAGACATGCTAGCCACTGTGACGTCAAAGTAAAACATTACCTAAATAAAAAGGCAAAGATTAAAAGTAATTTAGTTACATGAACATTAATTTACCATCACTTGGGTTTTATCATTACCTGTGACTTCCTACCAGTGGCTGAATTTAAGTACACGACCTGCTGATTCACTAGCTAGGGAGCTGCATTGAGCTTGAGACGCATCCCCAGACTTGAAAATGAAACGATTCCACTAAGCGTTTGTTTTTCTTTCATGCAGACGAAATCACCAGGAACTTCCGCCGCACCCTCAGAACCATCCAGATCAGTGGCAGCTTCGTCATCCTCCTCTTCCTCCTCTCCTCCACCTCCTCCTCCTCCAGCTCCAGCTCCAGCTGCCATCCCATTCACAGATGAGTGTTCACGAGACGACCCTCCGGCTACGGTCTCTCCTGCACGCAGTCCTGACGG[G/T]TTAGACACAAGACAAATAATTTAACTAGACATTTTTCTGTGTGGAAGTGAGATGATAGCCCCTTTCTCACATACGGAATTTTCTGAAACGGGTCAGCATGAAGATTTTAAACGTTTAAAATATATTTAAATCAGTCGAGTGTTAATAAACATTACCCATATTTTCACATGCTATTTGAAACATTAAAGAGCCCCTATTATGCATAATGAAAGGTCATATTTTGGTTTTGGGGTACCAACAACAACAGGCTGAAATGCATGCAAGGTCAAAAAAACACTTTCATTGTCTTATGATATGCATTTATTTTTACCTCATTATTAGGCTCACACGGAATCTGCACGCGCAGAATTCTGCAGATTTTCCACAGAATTCCGCAGATTTCTGGAGATTTTTAGCCCGTTATTAATTCTATTTATTTACTTGAGTAAATGTGTAAATATAAATGTATTCAGTTTTTATTTAGTAATTTATTACTTTTTATTTAATAAATTAAGGTTTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39696
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000041265 | Essential Splice Site | 140 | 362 | 3 | 10 |
| ENSDART00000041265 | Essential Splice Site | 140 | 362 | 3 | 10 |
| ENSDART00000041265 | Essential Splice Site | 140 | 362 | 3 | 10 |
| ENSDART00000041265 | Essential Splice Site | 140 | 362 | 3 | 10 |
Genomic Location (Zv9):
Chromosome 1 (position 52616187)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 51487136 |
| GRCz11 | 1 | 52121261 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCACGAGACGACCCTCCGGCTACGGTCTCTCCTGCACGCAGTCCTGACGG[G/A]TTAGACACAAGACAAATAATTTAACTAGACATTTTTCTGTGTGGAAGTGA
Long Flanking Sequence:
AAATGCCAACTGACCCAGCCGAGGCTCAAACCAGCGACCTTCTTGCTGTGAGGCAGACATGCTAGCCACTGTGACGTCAAAGTAAAACATTACCTAAATAAAAAGGCAAAGATTAAAAGTAATTTAGTTACATGAACATTAATTTACCATCACTTGGGTTTTATCATTACCTGTGACTTCCTACCAGTGGCTGAATTTAAGTACACGACCTGCTGATTCACTAGCTAGGGAGCTGCATTGAGCTTGAGACGCATCCCCAGACTTGAAAATGAAACGATTCCACTAAGCGTTTGTTTTTCTTTCATGCAGACGAAATCACCAGGAACTTCCGCCGCACCCTCAGAACCATCCAGATCAGTGGCAGCTTCGTCATCCTCCTCTTCCTCCTCTCCTCCACCTCCTCCTCCTCCAGCTCCAGCTCCAGCTGCCATCCCATTCACAGATGAGTGTTCACGAGACGACCCTCCGGCTACGGTCTCTCCTGCACGCAGTCCTGACGG[G/T]TTAGACACAAGACAAATAATTTAACTAGACATTTTTCTGTGTGGAAGTGAGATGATAGCCCCTTTCTCACATACGGAATTTTCTGAAACGGGTCAGCATGAAGATTTTAAACGTTTAAAATATATTTAAATCAGTCGAGTGTTAATAAACATTACCCATATTTTCACATGCTATTTGAAACATTAAAGAGCCCCTATTATGCATAATGAAAGGTCATATTTTGGTTTTGGGGTACCAACAACAACAGGCTGAAATGCATGCAAGGTCAAAAAAACACTTTCATTGTCTTATGATATGCATTTATTTTTACCTCATTATTAGGCTCACACGGAATCTGCACGCGCAGAATTCTGCAGATTTTCCACAGAATTCCGCAGATTTCTGGAGATTTTTAGCCCGTTATTAATTCTATTTATTTACTTGAGTAAATGTGTAAATATAAATGTATTCAGTTTTTATTTAGTAATTTATTACTTTTTATTTAATAAATTAAGGTTTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39697
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000041265 | Essential Splice Site | 140 | 362 | 3 | 10 |
| ENSDART00000041265 | Essential Splice Site | 140 | 362 | 3 | 10 |
| ENSDART00000041265 | Essential Splice Site | 140 | 362 | 3 | 10 |
| ENSDART00000041265 | Essential Splice Site | 140 | 362 | 3 | 10 |
Genomic Location (Zv9):
Chromosome 1 (position 52616187)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 51487136 |
| GRCz11 | 1 | 52121261 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCACGAGACGACCCTCCGGCTACGGTCTCTCCTGCACGCAGTCCTGACGG[G/A]TTAGACACAAGACAAATAATTTAACTAGACATTTTTCTGTGTGGAAGTGA
Long Flanking Sequence:
AAATGCCAACTGACCCAGCCGAGGCTCAAACCAGCGACCTTCTTGCTGTGAGGCAGACATGCTAGCCACTGTGACGTCAAAGTAAAACATTACCTAAATAAAAAGGCAAAGATTAAAAGTAATTTAGTTACATGAACATTAATTTACCATCACTTGGGTTTTATCATTACCTGTGACTTCCTACCAGTGGCTGAATTTAAGTACACGACCTGCTGATTCACTAGCTAGGGAGCTGCATTGAGCTTGAGACGCATCCCCAGACTTGAAAATGAAACGATTCCACTAAGCGTTTGTTTTTCTTTCATGCAGACGAAATCACCAGGAACTTCCGCCGCACCCTCAGAACCATCCAGATCAGTGGCAGCTTCGTCATCCTCCTCTTCCTCCTCTCCTCCACCTCCTCCTCCTCCAGCTCCAGCTCCAGCTGCCATCCCATTCACAGATGAGTGTTCACGAGACGACCCTCCGGCTACGGTCTCTCCTGCACGCAGTCCTGACGG[G/A]TTAGACACAAGACAAATAATTTAACTAGACATTTTTCTGTGTGGAAGTGAGATGATAGCCCCTTTCTCACATACGGAATTTTCTGAAACGGGTCAGCATGAAGATTTTAAACGTTTAAAATATATTTAAATCAGTCGAGTGTTAATAAACATTACCCATATTTTCACATGCTATTTGAAACATTAAAGAGCCCCTATTATGCATAATGAAAGGTCATATTTTGGTTTTGGGGTACCAACAACAACAGGCTGAAATGCATGCAAGGTCAAAAAAACACTTTCATTGTCTTATGATATGCATTTATTTTTACCTCATTATTAGGCTCACACGGAATCTGCACGCGCAGAATTCTGCAGATTTTCCACAGAATTCCGCAGATTTCTGGAGATTTTTAGCCCGTTATTAATTCTATTTATTTACTTGAGTAAATGTGTAAATATAAATGTATTCAGTTTTTATTTAGTAATTTATTACTTTTTATTTAATAAATTAAGGTTTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa30806
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000041265 | Essential Splice Site | 140 | 362 | 3 | 10 |
| ENSDART00000041265 | Essential Splice Site | 140 | 362 | 3 | 10 |
| ENSDART00000041265 | Essential Splice Site | 140 | 362 | 3 | 10 |
| ENSDART00000041265 | Essential Splice Site | 140 | 362 | 3 | 10 |
Genomic Location (Zv9):
Chromosome 1 (position 52616187)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 51487136 |
| GRCz11 | 1 | 52121261 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCACGAGACGACCCTCCGGCTACGGTCTCTCCTGCACGCAGTCCTGACGG[G/A]TTAGACACAAGACAAATAATTTAACTAGACATTTTTCTGTGTGGAAGTGA
Long Flanking Sequence:
AAATGCCAACTGACCCAGCCGAGGCTCAAACCAGCGACCTTCTTGCTGTGAGGCAGACATGCTAGCCACTGTGACGTCAAAGTAAAACATTACCTAAATAAAAAGGCAAAGATTAAAAGTAATTTAGTTACATGAACATTAATTTACCATCACTTGGGTTTTATCATTACCTGTGACTTCCTACCAGTGGCTGAATTTAAGTACACGACCTGCTGATTCACTAGCTAGGGAGCTGCATTGAGCTTGAGACGCATCCCCAGACTTGAAAATGAAACGATTCCACTAAGCGTTTGTTTTTCTTTCATGCAGACGAAATCACCAGGAACTTCCGCCGCACCCTCAGAACCATCCAGATCAGTGGCAGCTTCGTCATCCTCCTCTTCCTCCTCTCCTCCACCTCCTCCTCCTCCAGCTCCAGCTCCAGCTGCCATCCCATTCACAGATGAGTGTTCACGAGACGACCCTCCGGCTACGGTCTCTCCTGCACGCAGTCCTGACGG[G/A]TTAGACACAAGACAAATAATTTAACTAGACATTTTTCTGTGTGGAAGTGAGATGATAGCCCCTTTCTCACATACGGAATTTTCTGAAACGGGTCAGCATGAAGATTTTAAACGTTTAAAATATATTTAAATCAGTCGAGTGTTAATAAACATTACCCATATTTTCACATGCTATTTGAAACATTAAAGAGCCCCTATTATGCATAATGAAAGGTCATATTTTGGTTTTGGGGTACCAACAACAACAGGCTGAAATGCATGCAAGGTCAAAAAAACACTTTCATTGTCTTATGATATGCATTTATTTTTACCTCATTATTAGGCTCACACGGAATCTGCACGCGCAGAATTCTGCAGATTTTCCACAGAATTCCGCAGATTTCTGGAGATTTTTAGCCCGTTATTAATTCTATTTATTTACTTGAGTAAATGTGTAAATATAAATGTATTCAGTTTTTATTTAGTAATTTATTACTTTTTATTTAATAAATTAAGGTTTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa32770
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000041265 | Nonsense | 260 | 362 | 7 | 10 |
Genomic Location (Zv9):
Chromosome 1 (position 52610757)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 51481706 |
| GRCz11 | 1 | 52115831 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCATCCAGCAGAACCCGTCGCTACTGCCGGCGCTGCTGCAACAGCTGGGT[C/T]AGGAGAATCCCGAGCTCCTGCAGGTCTGCAAACTCACACACATGCACACA
Long Flanking Sequence:
AGGGGGGTTTCATTCTGAAAATGGTTTGGGGAGAGTTATTACAACCTAATAGACTCCTTCTCCTCGCCTTTTCTGTTTGCTGTCAAAACTGACAGCTGGAGGGGCGTGGCTAACATATTCAACCACGCCCTAATCTGAGAATTTATCTGAAAACAAACAGGACGTGCATTGTCAGATTTCAATTAAAGTTTACAAGGGCAAACTATTTATTTTTATTAATGACATGCACAGAATTGTTCGCCACAAAACTAGCAATGTGAGCTAGCCACATCATATTTCAGGTGTCGTTCAATAGCATCACAGAATGTAGAATGAATGGGGGAAAAAAAGTTAAGAGGTATTGTTGTGTTTGTCAGACCTGTATTTGAAAGCTGGTGTTTTGTTTTGTGTCAGGTGAGAATCCTCTGGAGTTTCTGCGCTCTCAGCCTCAGTTTCAGAGCATGCGGCAGGTCATCCAGCAGAACCCGTCGCTACTGCCGGCGCTGCTGCAACAGCTGGGT[C/T]AGGAGAATCCCGAGCTCCTGCAGGTCTGCAAACTCACACACATGCACACACACTAGGCATGGGTCGATAATCAGTTTCCAGGTTTACATCTGTTTGGAAAATGTAGCTAACATTTTCTTTTATACTGTTGCTAACGTACAGTTGAAGTCAGAATTATTAGACCTCCTTAATTATTAGACTGCTTGTTTATTTTTTTACTAAGGGTGTCACGATCCTCCAAATCCTCGATTCGATTACATTTTCGATTCTAAAGGCACGGTTCGATTTGATTTTCGATTATGAATAATTAATTAATTAATGACAGATTAATTATTTGTAGCCTACCGTTTAAACTACCTGACCTGCATGCTCTTTGTTTTACCCATAAACAAATCATACAGTAAATGAATAAAGGCAAGTTACACACATAATTACCACCTGTCAATCACTTTTTCTGCGGAACTCGTGAATAGGCAGTGATCTGTGTCGTTATAATGGTGTCGCTTAAAAAAGACGCACAA
Associated Phenotype:
Not determined