ZMP

nfix

Ensembl ID:

ENSDARG00000043226

ZFIN ID:

ZDB-GENE-080722-15

Description:

Novel protein similar to vertebrate nuclear factor I/X (CCAAT-binding transcription factor) (NFIX) [

Human Orthologue:

NFIX

Human Description:

nuclear factor I/X (CCAAT-binding transcription factor) [Source:HGNC Symbol;Acc:7788]

Mouse Orthologue:

Nfix

Mouse Description:

nuclear factor I/X Gene [Source:MGI Symbol;Acc:MGI:97311]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa19599	Essential Splice Site	Available for shipment	Available now
sa39695	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa19599

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000121795	Essential Splice Site	208	542	3	13
ENSDART00000135861	None	None	186	None	2

Genomic Location (Zv9):

Chromosome 1 (position 52543096)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	51414566
GRCz11	1	52048930

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GACAATTCCAGTCAACAAGGAGACTCGGACATCAAACCCCCACCAAACGG[T/A]GAGAAAACAACAGGCGAACTGATTTATACATTATTATACTGGCCAAAAGG

Long Flanking Sequence:

CTAAAATGGCTGCCAGGAGTCCAGAAAAAGAGAAAGAGAGCCGGAGAGAGAGAGAGAGATGGAGACAACGTGCTAAATAGAGAGAAAAGAGAGCGCTTTCGACTGCTGTTCTTTTGTTTGTGCGAGTGTATTCGTCCTAATCTCGACACACTCTATGAAATCGCGCTGGCATGAGGCAGTGTGTTCCCTTATCACCTACAGCCGCCCGATAAACACCTCCACAAACACACACACACAGCAGCCTGCCATAAACTGAGCTGATAACACACACTTTCATGCATATGTACTCAGACGAGTGGGTCTTTTTTTCATTCGCTCGTGTTGAAAATATCTGCTTGTTGTGTCCAAGTGCCGAAACATCATAATAATTGAATATGAAGCATCTTCTGCCATTCACTCTGATGTTTTTGTTTTTTTCCTCTTTGTCTCAATGCAGAATCTGGCCAATCAGACAATTCCAGTCAACAAGGAGACTCGGACATCAAACCCCCACCAAACGG[T/A]GAGAAAACAACAGGCGAACTGATTTATACATTATTATACTGGCCAAAAGGCGTTTGAAAGAAGCGTTCTACTCTTATGGATAAACCACATGTGAAATATGTTCGCAAACTGTTCCCAAATCACACATCTCGCCTGTTTTCACTTGCTATTTTATATATATCACCAGGGCTTTACATTAACACCCGCCAACCGGTAAGACGGTAAGATAGACACTCCCCTAGCCACTTTGGCTGGTTGAAAATAATTTTCCCAGATAATAATTTTAAAAGCAGTGTTCGACAATAAGGATGGTCCAATATGGATGCACAGGCGATCGAGAAGCAACACTACTGACAAAAATAATTGCGTTCGCAACTTCGCGCGAGCAAAGCAGGTGAATACCGAATGAGAGGATAATCACTCGCGCTAACAGCTGAGGTGACGCGCGCGGCTGTTTATAACGCGTGCGCGCTCCCGTTTCCTTTTGTGAAGCAACTGTGTCTAGAAACGCAACTGATGTG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa39695

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000121795	Essential Splice Site	353	542	8	13
ENSDART00000135861	None	None	186	None	2

Genomic Location (Zv9):

Chromosome 1 (position 52550797)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	51422267
GRCz11	1	52056631

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGAGAGGAAGATAAAGCATGAGAATGACGGCGTGCAGTTTCCTTACCATG[G/T]TTAGAAGACACAACACACACACACATGCACACGGGCAGAGGAAGCAGATA

Long Flanking Sequence:

GAAAAACATGCACATAAAAGTTAAAAAGGCCAACAACATAAAAATAATTTTGTTAGGGCGGCACGGTGGCTCAGTCCAAACACATGCACTATAGGTGATTTAAATGAAGTAAATTGGGCGTAGTGTATGAGTGTGTAAATGAGTGTGTATGGGTGTTTCCCAGTACTGGGTTGCAGCTGGAAGGGCATCCACTGTGTAAAACAAATACCGGAATTGTTGGCAGTTTATTCCGCTAATAAAGGGACTAAGCTGAAGGAAAATTAATCCAAATGACTTTTTTTCTTGAGTGGAAATGTGAGGGACGAGGACAAACTGGGCTCCAGCACCAAATCTGTGGAGAAAGCGTCAAACACTCCATCTTCATGAGCTCAACACAAAGTTTTCTCCTTCTTTTTAATGTTAACACTTCTCTTCTTCAGTTGCAGTGCAGCACCATTTGACGAATGTTCAAGAGAGGAAGATAAAGCATGAGAATGACGGCGTGCAGTTTCCTTACCATG[G/T]TTAGAAGACACAACACACACACACATGCACACGGGCAGAGGAAGCAGATAGGCTAGAGTTAGATTAGGGGTGAAGTATGATGCTTGGTTAGTTTGTTATTGAGTTACTGTTTGATTCCATCCATGTATTTTAGATGTGTATTCTGGGAGTTTGCATTAAACACTGAATATGAAAAATTGAAATTGAAACGTACACGCTGGAAACATTTGTTGAATGAGGAGCCATATTTACAGGGCAAACTCTAACTCAAAATAGAAAAGCATTGCACATTATGCATTTTGGCTGTTCATTTACAAAATGTCTTGGTGGCCAATGTTTGAAACTGGTTTTAAGATTCAAGTGTTTTGTTTACATCTTTATGTAAACTATAGAAATGCAGTTTCGTGAAAATATACAGTTGAAGTCAGAATTTTTAGCCCCCCTGAATTATTAGACCTCTTATTTATTTTTCCCCAATTTCTTTTTAATGGAGAGATTCTTCTCAACACATTTCTAAGCAT

Associated Phenotype:

Not determined