ZMP
PCM1
Ensembl ID:
Description:
pericentriolar material 1 [Source:HGNC Symbol;Acc:8727]
Human Orthologue:
PCM1
Human Description:
pericentriolar material 1 [Source:HGNC Symbol;Acc:8727]
Mouse Orthologue:
Pcm1
Mouse Description:
pericentriolar material 1 Gene [Source:MGI Symbol;Acc:MGI:1277958]
Alleles
There are 6 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa19460 | Essential Splice Site | Available for shipment | Available now |
| sa39576 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa39577 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa6578 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa1869 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa19460
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089654 | Essential Splice Site | 826 | 2038 | 15 | 39 |
Genomic Location (Zv9):
Chromosome 1 (position 15377864)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 15943032 |
| GRCz11 | 1 | 16635969 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAAATCTGCTGAAAGTTTTATTTGTTTTTTTTTCTATCATGTATTTTCA[G/A]TCATCTGTGAGCAGTAGTGCCAGTGGTCAAATGAGCAGGAAGATTCCTGC
Long Flanking Sequence:
TCATCGTGCAAATGTAGTGTGAATGGAGCTTTCTTTGTCAACATTTTTTGGTAATGTTTCTATAGAGCGACGATACAGATGGTACTACAGCTAATGAGGATGAGGGTTTGAAGCAACAACCCAACAACACACGAGCAACAGCTCCCAAAGCTCAGAGAGACATTGCCCTCTGTGATAAGGCCAGGTTGGTGTGCGTTCCTCATAGTAATTAGGCTGCAGTAAAAAGACCTGTGTGAAATGGTTTGTGATGTTTGTTTTTTTAGAGAGAGATTGTATGAGGAGAAACTCAAGCAGCAGCAGCATGAACTAAAGCAGCTTCATGAAGAGAGACAGAGACTATTGGAGATTCAGGGGAAGATACAGGACATACAGTGGGCTTGCCCTGATCTTCAGGTACTTCACACACGTGCACTTTTGAATTACAGGAGGTTGCTACCATAAACGCACAGCTCAAATCTGCTGAAAGTTTTATTTGTTTTTTTTTCTATCATGTATTTTCA[G/A]TCATCTGTGAGCAGTAGTGCCAGTGGTCAAATGAGCAGGAAGATTCCTGCAGCAGCCTCTACTCCTGCTCCTGTTCCATTACAATCTTCTTCCTCAGCTAAAGCCAACACTAGTGGCCTCAAACCCACAACTGAACCTCCTCCAGTCACCGTCACTGACAATGAGGTTAGTGTGGAATCCAAATAAAAATGTTGCTTTCGTTTATTTATCAAATAAGTTTGTAAAGTGATGGTATGCATTAAAACGGTGATAAATGACTTCTACCTTGTGTCTTATCAAGTCATCATGGTGTATTGATGATTAAAGTCTATTTATTTTTACCAATCCTGTGAAATGTTTAAATTTGAATGGTTTATTAGAAGTTGTGTTAATAATCTGCATCTTTGTTTAATTTAAGCTTTTAGCTAATGTAAACATTTATCAGAGCTAGGGCTGGGCAATTTGGCCTAAAATCAAAATCTCAGTTAATTGAACATTTTAACTCGATTATGATTAATGAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39576
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089654 | Nonsense | 1065 | 2038 | 18 | 39 |
Genomic Location (Zv9):
Chromosome 1 (position 15380504)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 15945672 |
| GRCz11 | 1 | 16638609 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCTCCAGAAACAACTCAACTTCAGCACTACCATGTGCCAAACTCTGCTT[C/T]AGGATCAGCAGGTGAGAGTGTACAAAAATGGATTTTGTCAACGTCTTGAT
Long Flanking Sequence:
GTTCTACACAGTGTCCTCTTGGTGATGATGATGATGATGATTACTCATCTGAGGTCGGAGCTGAGGAAGATGATGATGATGAACGTGATGAGGGAGAGGAGTCCAGCTCCACCGATGAACGGCATGCTTGCTCTACACAAAAACAACGCAACTACAACAGGAATAACAGAGAGGGGTAAATAAAAGGCTCACACTAAAGAAGCTTTAAGTTTGTATAGGAAATCTACACCATCTCTTATTAATTGCCTTTAACATTTTGCAGTCTGAAAGTTCTCAGCGAAGTTAACACGAGTCCTTCCCCTCGTGGATCAAGAGGTCGTTCTCGTCAGCAGCCGCAGTCTGAGAGAGGAAGTTCTAGCAAAGCGAAGAGGCAGGAGAACCTGCGATGGGCAGCTGATTTGTCTCTCGCTGAAGGTGCTGCACCAGCACACTGGCAGGAGCAGATCACACACCTCCAGAAACAACTCAACTTCAGCACTACCATGTGCCAAACTCTGCTT[C/T]AGGATCAGCAGGTGAGAGTGTACAAAAATGGATTTTGTCAACGTCTTGATTTCCCCATCTCACTAACATCCTATTTCTTCTCCGTAGACACTTTCATACATGCTGCAGGCTCTGCTCACTGGCCCCTGCGGTGTTGTGCCCAATAATGTGACCTCTCCTCAGGTCCCTCTCATCATGCACCAGCTAAACCAGTGTTACACACAGCTGGCTTGGCAGCAGAACAATGTCAATCGGTGTGTGTCTTTACACTTCATTAGAAAAACATTCATTTTAATAAAGTATAAGATATTACTTATTAGGAATGAAACCTTTTCTATAAATTACACTGTCAAATATTTGGGTAACACTTTACAGAAATGGTCCATTAGTTAATGTATTTAATAACATTAAGTATCAATAATCTTGTAAAGCATTTATTAATGCATTATTAAAATCCAAAGTAGTGCTTGTTAACATTAGTTATAGCACTGTGAGTTAGCATGAACTAATATTATATATGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39577
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089654 | Essential Splice Site | 1347 | 2038 | 22 | 39 |
Genomic Location (Zv9):
Chromosome 1 (position 15382217)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 15947385 |
| GRCz11 | 1 | 16640322 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCCAATATGAAGAGCCGCCGGAAGAGAGGCAGGGGACAGAAGAACACTGG[T/C]GTGTCTGTATTTAAAGTTTGACTTGCATCATTATTGGTTTGATATACTCA
Long Flanking Sequence:
AGAGAAACGGTATAATTTTTCTTTTTTAAAGAATGTAAGAATTGCTTTAAATGTTGGTTAGCTTCTAATTCAACTAAGGGATCTTGCTCAAAAAACAAAAAGAAGAAAAACTTATCCTTTTTTTTTTTCTCCTTTTCCATTTATAGGTTCCAGTCTCACTCTGATAATCTGACTGATGCTAATAACTCCAGCTGGTTAAACTCCTCTCTGAATCGTTCTAGTCAGAGGCCCATTCTTACCTCAGACCATCCAAGTCAGGGAGAGCAGAACTCGCTTTCCTCATCTCCTGTCCCTCACCCTTCTACCTCCCGGGATCACTCTTATATACCTGACTCCCAGGAGTCTATGAGCAGCCTGCCAGACAGAGCAGACCCAACCACTGTCACCAAGACCTTCAGAGCAGGACGCAAGGCTGCGGCACAGGCCAGCCTGGCATCCAGAGACAAGACCCCCAATATGAAGAGCCGCCGGAAGAGAGGCAGGGGACAGAAGAACACTGG[T/C]GTGTCTGTATTTAAAGTTTGACTTGCATCATTATTGGTTTGATATACTCATAGTATTTCTACATAGACTTTAAAAATTAGCTCTGGCACTTTAAAATTCAAAGTCTCATTGCACTGCACTCTTCAATTATTTGCACTCAACTTTCTTTGTGCCCTTATTTTTATTTATAGTATTTTTCTCTCTTAAAGTTTACTAAAACTATTCAGTGCTTCCTACAGGTTTGAAATATACTTGCGGTGGTTGCCGGATTGAAACACACCATTTACCCACATCACATATATAGTTAACTATATGCGACAAACAAAACATAATTATTTTTCAACAAGAATTTAATTTATTGTGACACTGTTATAGACTGTTTATTTTCAATGGGTTAAAGTGCTTCTCTCTCTTTCAAGTTCAAAGCAAACTTGAATGCTAAAGCATTTTAGAAATGTATATAAAATAGTCTATGTAATATATTAACATAAATTAATAAAATAATCAGCAAATGAGAAATA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6578
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089654 | Essential Splice Site | 1614 | 2038 | 28 | 39 |
Genomic Location (Zv9):
Chromosome 1 (position 15386041)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 15951209 |
| GRCz11 | 1 | 16644146 |
KASP Assay ID:
554-5409.1 (used for ordering genotyping assays)
KASP Sequence:
CAGCTCTGCCATTGCTGCTGCCACCRYTGCCTCACCTCAAGGTACTCAAG[G/A]TACTGCYGCCATCACTGTCACAYTGCACATCAGACCCGACAGACACWTAC
Long Flanking Sequence:
TTTTTCTATCCTTTATGTTTCCAGGATGCATCTGACAAGATTGTAACTGTTAAATCCAACTCTGTATTGAAGAGGGTACCAGACAGAGACTCCATGGACAATGAGAGCCTTCTGTCTACGTCCTCCAACCTTGAACCATTTGCTAGTGATGACCTGGGTAAGAAGAAAACAGCACTTTTTTGTGTGCAAACAAGCTCATTCATGCTAAAAACCAATAGGCTGGGGTTGCTTACCTACGATCATGCTTGCTTTGCTAAAGCTGGGGCTGTGCTGGGCTGAATCCTGTCATACTCCACTTGAACACTTTTCTGTTTCGCTCTCTCTGTCCTTTTATTTCCTTCCTGCTCTTTCAGGTAACACAGTGATTCATTTAGATAAGGCATTGGCCAGGATGAGGGAGTATGAGCGCATGAAGCTGAGGGCTGAATGTAACACAGATAACCCTGAGCACAGCTCTGCCATTGCTGCTGCCACCGTTGCCTCACCTCAAGGTACTCAAG[G/A]TACTGCTGCCATCACTGTCACACTGCACATCAGACCCGACAGACACATACAACAGTGTCAAATGTGCTATCTGAAGCGTTCCATTAGAAACATTGTATGAGGTTTTCCAACGCAATGGCAAAGAAACCAGTCAACTAGCAGGATGGGAGGTTGTAAAAACTTGTGTCTATAGTCGCTTATTACATTGCATTTGCTCACAATGTTTCTGACAAATAGTCACTGCCAGTAAATATGTTTCATAATTAATTAAATGCACATTTTTTAGATATTTTTTTAATGTGATATTACAAAATATTTACTTTACAATCTAGGAAGTCTGTATCATGTGCTGCTTTATGGCATGTTGTGTGACCTGGCTCAAAAGTTCCTCTACATTGAAATTTTCCTCTCAGAGAACCAGTTTAAAATGTTTTATTTATTTATAAAAAATGTCATTCAAGGATGGGCAAAAATACATTGAAATGTATTTTAAAAATAAAATGCCAAGTACCTCAGTTTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1869
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000089654 | Nonsense | 1870 | 2038 | 34 | 39 |
Genomic Location (Zv9):
Chromosome 1 (position 15391971)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 15957139 |
| GRCz11 | 1 | 16650076 |
KASP Assay ID:
554-1860.1 (used for ordering genotyping assays)
KASP Sequence:
TAGAGGTGCAAACATCATTACAAGCCAGCATGGACAACACTTGTGAACAC[A/T]GAGAGGTGCTTTTACAGTGTACAGTAGATAGCAAATAAGSTGACACAGCT
Long Flanking Sequence:
GCGTTTCAATGTCTACGCCTGCTTGTATTTGACAATAAATAATTTGATTAGAAAGTTCCAAGATCTTATAATGTGCTGTTCATTTTAATAAATTTTGTTTCCCTTTAAAAAAAATCTGTATCCGTAAAAGTCATATTTATAATGTAAGTCAATTTTACCATGTTCTTTCTTTCAAGTGGTGTCTCTGAACTCCCATTTATTATACTTCATTTTCTGCTCCATTTTTCTGCCTATGCACTAATACATGTGGATTGTTTGCTTGATTTTGTTAGTCTTATCATGTGCAGGTTAAAACCACTGCGTAATGTGTTTGACTCTGATAAGAATCTGTTTGACTTGTGCTCTTTTGTTCAGGCCTGTCTAAAGCAGAGACACAGGCTCTATGCAACTACGGCAGTGGAGAAGATGAAAATGAAGTGGAGGAGATGGAGGAGTTTGAGGCTGGACCTGTAGAGGTGCAAACATCATTACAAGCCAGCATGGACAACACTTGTGAACAC[A/T]GAGAGGTGCTTTTACAGTGTACAGTAGATAGCAAATAAGGTGACACAGCTTAGTAATATAAACTAATAATGACCTGTTGTTCATCCAGAGCTCTGCGTTACAAAACGAAACCCCACAGGAAACCAAATCAGACCAAGACAGCTCAGAAAGTAGTCAGTGTATGTTTTTTTTCTGTAATATTACACTTTTTATATTTATTATTGATTATTACACTCCATTACAGTTGCTGCTATAATATTATTTTCATATTTTCTCCCAATTTCAAACAGTAAATAGTGAACCGTCTGATCCCAAAGTCATTGTTCAGCCTCCAGAAGAGGGTGGAGAAGAGGAAAAATCTGCTTCGGGAGATGAAGGAGAGGAAAAGGAGGACAGCACTTCTGCTCCAGTCCAGGAAACTCCTCAGAGCTCCGATTCAGCCAGTCCTGATACAGACTCTCCAGTCATGATCAACACTGATGTACGACACTGATCTCAACCAGCATCTTTAAAGTATTTAT
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |