ZMP
fn1b
Ensembl ID:
ZFIN ID:
Description:
fibronectin 1b [Source:RefSeq peptide;Acc:NP_001013279]
Human Orthologue:
FN1
Human Description:
fibronectin 1 [Source:HGNC Symbol;Acc:3778]
Mouse Orthologue:
Fn1
Mouse Description:
fibronectin 1 Gene [Source:MGI Symbol;Acc:MGI:95566]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa553 | Nonsense | Available for shipment | Available now |
sa19408 | Essential Splice Site | Available for shipment | Available now |
sa39535 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa19407 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa553
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000017312 | None | None | 194 | None | 8 |
ENSDART00000023692 | Nonsense | 36 | 2408 | 1 | 45 |
ENSDART00000103755 | Nonsense | 36 | 2500 | 1 | 46 |
The following transcripts of ENSDARG00000006526 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 4432026)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 1 | 4845067 |
GRCz11 | 1 | 5542872 |
KASP Assay ID:
554-0463.1 (used for ordering genotyping assays)
KASP Sequence:
TCCACTGCATGCCACAATCCGCAGGGAAAAKTAAAAGACAAGCCCAGCAG[C/T]AGCAAATCCACCTGGACACAGTTTACGAAGAGGCCAGGAGTTTAGCCATC
Long Flanking Sequence:
GTACTCATTTATGCTGAGCACTATATATATATATATATATATATATATATATATATATATATAAACAAAACTTGTTCAGCTCTGAATAAATGTGAACTCTATTACCTGCGGGTTCATGACTGCGCAGGTGATGCTTGAGTTTTGCCAGATTTCCCGACAGTGACGCAGAGACGGGAGAGGGTGAGAGAACCTCATAAAGCCCCCAAACACACACACACACACACACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGGATAAAACCCCCCTTTAAAAGAGCACTCGTCCCACATCAGCTGGACGGCGGAGCTGCAGTACTGTACAGTCAGGGGAAGCAGCCGAAATACAGTCAAAGCCAGAAGCTGCTCTCCATAACGCGGGTGAAAATGACCCGTGAGTCAGTAAAGAGACTCCTGCTGCTGCTGTGCATCGGCGGATCTGTCCACTGCATGCCACAATCCGCAGGGAAAAGTAAAAGACAAGCCCAGCAG[C/T]AGCAAATCCACCTGGACACAGTTTACGAAGAGGCCAGGAGTTTAGCCATCCACGAAAGTAAGTTCATCGACTTTTTTATATGCAGAAAAAATACAAACATTTCATAGCACATCTGAAATTGAATGTCTTTATGTGAGCACAAGAGGACAGTTCGCGGTTTAAGTGAGATATAGTGTCATATAATTATTGTTTTAGTATTTAATGTCGTTTTTTTACGTCCCTTCAGGTGGCTGTAATGACAACGGTCGTGTTTACAGGATGAACGATGAGTGGGAGCGGCCCTACATGGACAGCACTCTCAAGTGCACTTGTGAGGGAGCTTCAGGGGTCAAGTGTAGATCCAAACCTGCAGGTGAGCGCTTATGCGTTTATAATTCGTGCTCGTTTATTATTATTTTGAGATTGTATTCATTATGACAACGTTTAATAAATGCTTTCCTGTTATGCGTATTAAGTACCTATATAGTCATTAAAAAGTTATCTGGTCAAATTCTGTCAGC
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa19408
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000017312 | None | None | 194 | None | 8 |
ENSDART00000023692 | Essential Splice Site | 55 | 2408 | None | 45 |
ENSDART00000103755 | Essential Splice Site | 55 | 2500 | None | 46 |
The following transcripts of ENSDARG00000006526 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 4431967)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 1 | 4845008 |
GRCz11 | 1 | 5542813 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CACCTGGACACAGTTTACGAAGAGGCCAGGAGTTTAGCCATCCACGAAAG[T/A]AAGTTCATCGACTTTTTTATATGCAGAAAAAATACAAACATTTCATAGCA
Long Flanking Sequence:
TATAAACAAAACTTGTTCAGCTCTGAATAAATGTGAACTCTATTACCTGCGGGTTCATGACTGCGCAGGTGATGCTTGAGTTTTGCCAGATTTCCCGACAGTGACGCAGAGACGGGAGAGGGTGAGAGAACCTCATAAAGCCCCCAAACACACACACACACACACACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGGATAAAACCCCCCTTTAAAAGAGCACTCGTCCCACATCAGCTGGACGGCGGAGCTGCAGTACTGTACAGTCAGGGGAAGCAGCCGAAATACAGTCAAAGCCAGAAGCTGCTCTCCATAACGCGGGTGAAAATGACCCGTGAGTCAGTAAAGAGACTCCTGCTGCTGCTGTGCATCGGCGGATCTGTCCACTGCATGCCACAATCCGCAGGGAAAAGTAAAAGACAAGCCCAGCAGCAGCAAATCCACCTGGACACAGTTTACGAAGAGGCCAGGAGTTTAGCCATCCACGAAAG[T/A]AAGTTCATCGACTTTTTTATATGCAGAAAAAATACAAACATTTCATAGCACATCTGAAATTGAATGTCTTTATGTGAGCACAAGAGGACAGTTCGCGGTTTAAGTGAGATATAGTGTCATATAATTATTGTTTTAGTATTTAATGTCGTTTTTTTACGTCCCTTCAGGTGGCTGTAATGACAACGGTCGTGTTTACAGGATGAACGATGAGTGGGAGCGGCCCTACATGGACAGCACTCTCAAGTGCACTTGTGAGGGAGCTTCAGGGGTCAAGTGTAGATCCAAACCTGCAGGTGAGCGCTTATGCGTTTATAATTCGTGCTCGTTTATTATTATTTTGAGATTGTATTCATTATGACAACGTTTAATAAATGCTTTCCTGTTATGCGTATTAAGTACCTATATAGTCATTAAAAAGTTATCTGGTCAAATTCTGTCAGCAATATAAAGCCTTTGGTTATAACATATATAATTTTTTGTACATGACAAAATGTCTTATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39535
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000017312 | None | None | 194 | None | 8 |
ENSDART00000023692 | Nonsense | 871 | 2408 | 18 | 45 |
ENSDART00000103755 | Nonsense | 871 | 2500 | 18 | 46 |
The following transcripts of ENSDARG00000006526 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 4413502)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 1 | 4826543 |
GRCz11 | 1 | 5524348 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGAGCTCATCCTCCCTGAGACTCAGACATCGGTGACACTGGGTGACCTA[C/T]GACCTGGCCTGTCATACAATATCAGCATTTACTCAGTGGAAGACAACTTG
Long Flanking Sequence:
ACGTTGATGTTTATGAAGTCAATCCAGAAGGAGATACAAAACTCATCCTGACTACAACTCAAACCACTGGTAAGATCACTGTATGTAGTGTCTTAGTTCCTGCTTACAACAGCAAAACCTTTTTGATTGTTCAAAATTATATGTACTACACTTTTTAAAGATTCACATTTTAACCAGCCGTCAGAATGTGCCTTCAAATGAATCTCCTATCTATTCACAGCACCTGATGCTCCAACCAATCATGAGGTCTCAAATGTCCAGGAGACCTCCATTGTGATCAGATGGTCCAAACCCAAAGCACCCATTACTGGTATAAGATATGCAAACCAACATTTGGGATTTAAGAATGTCTTATAAAGTTGTCTTTTGAGCATGGTGTATTGGAATGTGGAATGAACTCTTTTTCAGGCTATCGTGTGGTGTACACACCCTCAGTCGAGGGCAGCAGCACTGAGCTCATCCTCCCTGAGACTCAGACATCGGTGACACTGGGTGACCTA[C/T]GACCTGGCCTGTCATACAATATCAGCATTTACTCAGTGGAAGACAACTTGGAGAGCGAACCTTTGGTCCTGCAGGCAAGCACAGCTGGAGAGCAACAGCCCGGTAAGAGCTCCTTTTATGGAGAAGAGATTTTTCATTTTTATAGCTTTCTGCTGTTTCAGTTAGCCTGTTTGTCAAAATATTCTCCACTCACACGTTCCTAGTATTTTATCTCTGCATTAAGTTCAAAGAGCTATTATTAAGAGAATTTTACTAACTTTTCTCAAAGCTGGTAAAAATGCCCAAGTTTCTCACTCATGTGTAAAAATGTCTGTTCACAGTGAGAGCTGGCACTAGCAAATGTCTGAGCTGGGAGATTTAGAGCTTACTCAGGGCCAAAACAACCTTATAAGGATAACCAAGTTTCAAGTGTGTCTTTGGGGGCTCAAATGTCCAGTTGATGTCTTTTTAACCAAACACATGCTACTTTATGGGAACTGTGAAGTGGTTTCTTCCGTGAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa19407
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000017312 | None | None | 194 | None | 8 |
ENSDART00000023692 | Essential Splice Site | 1983 | 2408 | None | 45 |
ENSDART00000103755 | Essential Splice Site | 2075 | 2500 | None | 46 |
The following transcripts of ENSDARG00000006526 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 1 (position 4400491)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 1 | 4813532 |
GRCz11 | 1 | 5511337 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGCTTTTTCCACGCAATAATGTTGGCCAGAACTATGCCACTATAGCCGG[T/G]AAGACACACATTGCATCACATTACAACCAGATGTGTAATAGACAGCAGTA
Long Flanking Sequence:
TAGTGTCTAAAATGTATGAAGTTTCTTCAATTTATTACAAACTTTTGTTTTTTTTTATGATGTTGGGGTATTGCCAATAATTGAAATAACTGTATTCCATACATCAGGTTTGCATCCAGGTGTCATGTATGTGGTCAACATGTACACAGTAAATGGAAACATGAGAAGTCCTCCTTTCACAATGACTGTAAACACAGGTACAAAGTAGCTTTACCTAAATAGTGCTGATTTGAGGTGAATTCTCAAATTTAATTGACTGACATTGCTCGCTATGACCTTAAACTTTTATTTTCACTCTATGCAATTACAGCACGTCCAGCTGTTCAGTCTCCAACCAACCTCCAATTCACCTCCCTAACCCCTAATTCCATCTCCTTCACTTGGCAAGCCCCTCCAACACACATCACAGGATATTATATTACTTATGAAGAATCAGGTGGCTCACCTCGTGAGCTTTTTCCACGCAATAATGTTGGCCAGAACTATGCCACTATAGCCGG[T/G]AAGACACACATTGCATCACATTACAACCAGATGTGTAATAGACAGCAGTAAATAAATAAATATCTTAATTTGTCTTGTGAATATATTTGTGATTTTTAAATTCAGGTCTAAAACCAGGCACTGAATACATTATTAAGATCATTGCCCTTCTGAATAACCAGAGAAGCGCACCACTAGTTGGCACAGCCACAACTCGTAAGTATTTACTAATATTCAATTCAATTTCAATTCAGCTTTATTTGTATAGCGCTTTTACAATGTAGATTGTGTCAAAGCAGCTTCACATAAATGGTCATAGTAACTGGAACAGTGTAGTTCAGTTTTTAGTGTTTAAGTTCAGTTTAGCTCAGTTCAGTGTGATTTAATCATTACTGAGAGTTCAAACCCTGAAGAGCAAATTCATCGATGCGTAGCTCTACCATTCCTGAACCATGCGAGCCAGTGGCGACAGCGGAGAGGGAAAAAAAACTTCACCTGATGGGAGTGAAGAAAAAAAACCT
Associated Phenotype:
Not determined