ZMP
zgc:110816
Ensembl ID:
ZFIN ID:
Description:
UPF0364 protein C6orf211 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q58EM4]
Human Orthologue:
C6orf211
Human Description:
chromosome 6 open reading frame 211 [Source:HGNC Symbol;Acc:17872]
Mouse Orthologue:
1700052N19Rik
Mouse Description:
RIKEN cDNA 1700052N19 gene Gene [Source:MGI Symbol;Acc:MGI:1920669]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa39280 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa39280
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000078062 | Essential Splice Site | 134 | 448 | 4 | 5 |
The following transcripts of ENSDARG00000055676 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 20 (position 26418955)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 26490258 |
| GRCz11 | 20 | 26389348 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGGCACATTTTTAATGGTTTAATTAATTTGTTTTGTTTGTGTTTCCAAA[G/A]TCCACCGATGCATAACTTTGACCCGTTTAAGGAGGGAAAAACGCAAAGCT
Long Flanking Sequence:
CTCTTTACAAGGACATGTGACCACATGGCAATCACAGTTTACATTAAAAGGGTTGTAATTTAATACAAGTATAACTTACAGAAGCAAAATTGGCTTGTTAGTACAGTAAATAAAAAAAGATTTAAATAACAGAATTGTAACGAAAACCATTGAAATGCATGCATAAAAGGTCTAAATGAAGAAATGAGGAATAACTGAATGGAATAATGTGCCTAGAAATTCTTTAATAATAATTTACAAGGCAAATTACACCTTTTTAAATAACTGATTTTAAAGTGCTATCTATAACAATGATTCTCAACCACGTTCCCGGAGGACCACCAGTCCTGCACAATTTCCATGTCTTCTGGTCCTCTAGAAACGTGGTTGAGAAACACTTATCTATAATGTACTTTAAAGTATATTGTAATGTTTTGTTAAAGCAATGTTCATTGTACTCGCCTTGTTGCATTGGCACATTTTTAATGGTTTAATTAATTTGTTTTGTTTGTGTTTCCAAA[G/A]TCCACCGATGCATAACTTTGACCCGTTTAAGGAGGGAAAAACGCAAAGCTACTTTGAATCTCAGCAAGCGATTAAGTACCTCTGCACGTACCTTCAGGAGCTCATCACCAACATGGAGAACATGACAGAGATACAGCTGCGAGAGAACTTCCTCAAGCTGATCCAGGTCAGTATGTCAAGCAGTCAAAGACGAGGCCTCACATTTTCATGTCTGCATCAAATGAAATTTACAGAAGTTATTTAAATGCAAGTAAAGTCTCAGCTTTTTTTTAAAAAAAATTTACCTTTTGTGAAAATAAATGTCAAAAAATATTGGCCAAACTGCAGAATTACTATCCAGCTTTTTAATAAATATATAAATATGTTTAGAAAAGCATTGGCTGTGTTGTTTTCAAGTTTTATTGTTTTGCATTAATATTGAAATTACTTGAGGACCCTTGCTTCAAGTATGAATAACGTTAGAGGTCATTCAGTTAAACACAATCAAAAACCCAACATGG
Associated Phenotype:
Not determined