ZMP
si:dkey-266j7.2
Ensembl ID:
ZFIN ID:
Description:
Novel protein [Source:UniProtKB/TrEMBL;Acc:A3QK21]
Human Orthologue:
CACNA2D1
Human Description:
calcium channel, voltage-dependent, alpha 2/delta subunit 1 [Source:HGNC Symbol;Acc:1399]
Mouse Orthologue:
Cacna2d1
Mouse Description:
calcium channel, voltage-dependent, alpha2/delta subunit 1 Gene [Source:MGI Symbol;Acc:MGI:88295]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa36580 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa39191 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa36580
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000080995 | Essential Splice Site | 41 | 548 | 1 | 18 |
| ENSDART00000143965 | None | None | 76 | None | 3 |
Genomic Location (Zv9):
Chromosome 18 (position 9186161)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 9763138 |
| GRCz11 | 18 | 9732328 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCGCATCTGTTCATATCTCGTGCCCATCGCAGTTTCCCAGTCCGCTCATG[T/C]AAGTTCTTTGATGTTGTTTTCGCGTCAACTGGTGATTAAATACAGCTTTT
Long Flanking Sequence:
GCAGAAGGAGGAGAGAGGGGGACTGGAGAGGGTTGCATTGTATGAAGATCCGATGAAAGACAGCAGGCTATCGCAATAAGAGGGCAAGAGAGAGAGGGGTGGGGGCAGAATGACGCTGATTCGGGGCTATTGATCTCTCCCTCCCCTCTATATGGGGTCAGTAGTTTGATCGGAGCGCGCGCAGGAACACCGAAGAGACACACGCGCTTTTACCATGTAACATGAAGCGGTGCGTGTAGACAGATCCAACCGGACACTCATCACCAATCCAATCCCGTCCGTCCAACCTGATGACAGGAAATAATAAGATTATCAAGCAGGACAGGAGAGCGACGCGTTATATCTTTGGAGAAAAGTAACTGGTGTGGATTTGACAGATGACGGTGCGCTCGAGATCCACAGATCTGACCATGAAGCCGTCCAGAATCTCCGTGATGATGATGTTCATCTTCGCATCTGTTCATATCTCGTGCCCATCGCAGTTTCCCAGTCCGCTCATG[T/C]AAGTTCTTTGATGTTGTTTTCGCGTCAACTGGTGATTAAATACAGCTTTTTTCCCCTTTCATGCAGCATCTTTATGTCTCTTTCAACATGCGTGTTTGTAAGTTTTAGTGAGAGTGTGGATCGTGCTGGATGGACAAAACACAAAACAATTGATTTAGTTTGTGTATTTCCAGCCTTATGGTCAATTATAACCCAACAAAAGCTGAAATGTATACTTAGATATGATTCTGGATGTATGTTTTGTTTACAGTTGTTTAATAGTCAAGCAGATACATCCACAATCAATATTATGAATTTGCTGAATGATTAAAAGGGAGGAGTCATAGTGTACATAGCCTACCGTTATTGATTTGTTTAATGAAAAAGCTTGTTTCCAGGACCAGTTCACTCGATTCTGTTTTTATTCACACACTCTCATGTTGCACAAAAGCTGACTTTATTCTGGTGAATTGTTTTTTTTTCCTCGTGACAGCTGTCAAAATCCAACCAAAAGAACAGAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39191
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000080995 | Essential Splice Site | 68 | 548 | 2 | 18 |
| ENSDART00000143965 | None | None | 76 | None | 3 |
Genomic Location (Zv9):
Chromosome 18 (position 9205017)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 9781994 |
| GRCz11 | 18 | 9751184 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCTGGTTTCATTAGCAGACACAGCCAGTGCTGGAGATAATCTGAGACAG[G/A]TCAGAGGTCTAAAACTTCTCACATGCACACAGTCTCACACACACAAATAC
Long Flanking Sequence:
TAGTTCCAGTCATCAAGGCTACATGAACTAATTAAAGCCCCCAACATTTACAAAACCTCATGAAATAAAGACCATTTTTGTGTTAAAGTGTATTTGAATTGTGGTGTGTTTATACTGAAGAACAGTTTTATTTTCTCTAGGTTATTCATGTGGAGTACTTACTTTGGTTTGCTAAGTAACTATTAATTTTTATTTGTGGCACTATTTTATGCACCTGCCATTTACTCGACTGTGATATGACTCGCTTGTTTTGCCCTTTTTATGGTTATGACTTAGTTACTCCATACAGAATTAATTATCACATTTTTTGACCACAAAAGTATGCATACAGATCTGACTATCCATCTGTCTGTCCGTCCATCCGTCTGTCTATCTGTTAATTTATTTCCATAACTAATAAGAGTGTTTGTGTTTACAGGATAAAAGAGTGGGTAGATCAGCTGCAGCAAGAGCTGGTTTCATTAGCAGACACAGCCAGTGCTGGAGATAATCTGAGACAG[G/A]TCAGAGGTCTAAAACTTCTCACATGCACACAGTCTCACACACACAAATACTTGTATACATGGTTTATGGGGACATTCTCTTGGCATATTGTATTTTATTCAGCAGAAAACGCACATTACATGACCCTTCGCCACCCCAAACCTAACCCTCACAGGAAACCTATGGCAAAATTTGATTGTTAAAAGTCCCCCTTCAGTATGATTTTAAGCACTTTTTATTAATTACAGAGACACGAGACACAGTAGAGTACATTGTCATAACCATGAAAATATACAACTTTGTGTCCCTGTAAACCTGTACACACACATACACACCCCTGAGCATAGTGATAAATGTGGATTTGATGTGTATTTACACAAGCAAATTGTGAGTGAGAGTTAAGCCTCAATAAAAGCATGCTTAATTATCAAAACAATCATTACCAGTAAGCCGTCATCTCGTTAGTTCATTAGGAGAGCCCCTAATGAGTGTCTTTTCCTCTCCGTTATTGCAGATCTTTA
Associated Phenotype:
Not determined