ZMP
LOC100330810
Ensembl ID:
Human Orthologue:
NOD1
Human Description:
nucleotide-binding oligomerization domain containing 1 [Source:HGNC Symbol;Acc:16390]
Mouse Orthologue:
Nod1
Mouse Description:
nucleotide-binding oligomerization domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:1341839]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa12613 | Nonsense | Available for shipment | Available now |
sa28761 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa39133 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa17969 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa12613
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000052749 | Nonsense | 566 | 947 | 3 | 11 |
Genomic Location (Zv9):
Chromosome 16 (position 57299257)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 54030045 |
GRCz11 | 16 | 53715542 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGTCRTCACGTCTCTCCTGCATACCTTGCCTAAAAAACACAAAACCCAGA[G/T]AGAGCGATGCATTCCAGACCAACTTTCAATTCACTAATCTATTCCTGTGC
Long Flanking Sequence:
GCTTTAAGCATCTGCAATCAGTGTATGATGACTTTGAGTTGCCGGGTTCCTGTATCACACTCACAAATGTATTCCTGCTGCTCTCCGAGGTTTTTCTCGGACACTCAACTGCACGTCCTGGACTCCTAAGGCGAACATTGAGATGTCCTACGGAGACCTTTAAAGCTGGTGAACAGAAGCTTTCGGGATTTGCTCGACTAGCATTGCACGGTATTGAAACAAGTAAACTGGTGTTCACCTTAGATGAAGCGGTGTGCTGTGGATTAAACGATGAAGATCTTCAGTTTGGGTTTTTAAGACCTGCTTCGCATTACGATTCTTCATCCGCAAGCTCCTTCGAGTTCCTCCACGAGACTCTCCAAGCCTTCCTTGCAGCCTTTTCTCTAGTTCTGGATGCAAAACTAAATCCAGAGTCAATCCTAAAGTTCTTCTCTAAATGCAAATACAAGAAGTCGTCACGTCTCTCCTGCATACCTTGCCTAAAAAACACAAAACCCAGA[G/T]AGAGCGATGCATTCCAGACCAACTTTCAATTCACTAATCTATTCCTGTGCGGACTTTTGTCTAAATCCAACGCAGCTCTCCTGGAGCATCTCGTCCCGCCGTCGGCATTGAAGCAGAAACGCAAGATACTGAAATCGTATTTATCGAACAGCGTGAAAACTCATCTTAAGAGCCTCCCTCGGTCTCCGTCCACAGACATCGAAGGAGATAAAGTGCACGCGATGCCCAACTTCCTGTGGATGCTGCGCTGCATATTTGAGACAAACAGCGAGGACGTGGCCAAGATGACAGCTAACGGCATATCTGCAGATTATATTAAGATTGCGTTCTGTAATATTTACTCTGCCGACTGCAGTGCTTTGAACTTCGTGCTGCACCATCGTAGGAAGCATTTGGGAGTCGATATGGACAATAATAACATTAACGATTATGGCGTGAAGCAACTGCGACCCTCTTTCAGCAAAATGACGGTAGTGAGGTAAGAAAGCAGACAGAGTTTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa28761
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000052749 | Nonsense | 670 | 947 | 3 | 11 |
Genomic Location (Zv9):
Chromosome 16 (position 57298943)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 54030359 |
GRCz11 | 16 | 53715856 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AACAGCGAGGACGTGGCCAAGATGACAGCTAACGGCATATCTGCAGATTA[T/A]ATTAAGATTGCGTTCTGTAATATTTACTCTGCCGACTGCAGTGCTTTGAA
Long Flanking Sequence:
GATTCTTCATCCGCAAGCTCCTTCGAGTTCCTCCACGAGACTCTCCAAGCCTTCCTTGCAGCCTTTTCTCTAGTTCTGGATGCAAAACTAAATCCAGAGTCAATCCTAAAGTTCTTCTCTAAATGCAAATACAAGAAGTCGTCACGTCTCTCCTGCATACCTTGCCTAAAAAACACAAAACCCAGAGAGAGCGATGCATTCCAGACCAACTTTCAATTCACTAATCTATTCCTGTGCGGACTTTTGTCTAAATCCAACGCAGCTCTCCTGGAGCATCTCGTCCCGCCGTCGGCATTGAAGCAGAAACGCAAGATACTGAAATCGTATTTATCGAACAGCGTGAAAACTCATCTTAAGAGCCTCCCTCGGTCTCCGTCCACAGACATCGAAGGAGATAAAGTGCACGCGATGCCCAACTTCCTGTGGATGCTGCGCTGCATATTTGAGACAAACAGCGAGGACGTGGCCAAGATGACAGCTAACGGCATATCTGCAGATTA[T/A]ATTAAGATTGCGTTCTGTAATATTTACTCTGCCGACTGCAGTGCTTTGAACTTCGTGCTGCACCATCGTAGGAAGCATTTGGGAGTCGATATGGACAATAATAACATTAACGATTATGGCGTGAAGCAACTGCGACCCTCTTTCAGCAAAATGACGGTAGTGAGGTAAGAAAGCAGACAGAGTTTGGGAGAGAGCAGTGTTTCCCAAGACCATTATTATTTAATTATTCAGTCGATCAATTTTATTTGCTTTATATAACGGCAGATTACAACAAAAATCATTTAGAGGACACCTATTATGCTCCTTTTTACAAGACACATTTGAAGTCAGAATTATTAGCCCCCTTTTAAGTTTTTTTCTTTATCAAATATTTCCCAAATGATGTGTAACAGAGCAAGGAAATGTTCACAGTATGTCTGATAATATTTTTTCTTCTGCAGAAAGTCTTATTTGTTTTATACTGGCTAGAATAAAACAATATTATTATTATATTACAATAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39133
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000052749 | Nonsense | 746 | 947 | 4 | 11 |
Genomic Location (Zv9):
Chromosome 16 (position 57296541)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 54032761 |
GRCz11 | 16 | 53718258 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGCTGACAGACAGCGGTATTGAGGTTCTGGCTGAGGAACTCATCAGATA[T/A]AAAATCGTGAAGGTGTTGGGGTGAGTTTACGGTTTACGGTTCATCTGTTT
Long Flanking Sequence:
AGTGTAAGGAGGATAACATTGGGGTGATATGATCATATTTTCTAGACCTGGTAAGAACTCAGGCAGCTGCGTTTTGTACTAGCTGAAGTTTGTTAATAGAGGATGCTGGGCAGTTAGCAAACCAAGCATTACAGTAATCCAGCCTAGAGCTCATAAAAGCATGGACTAGCTTTTCTGCATCTGAGATGGATAGCATACTTTGTTACTTAGCGATATTTCTCAGACGAAAGAAGGCAGTTTTTGTGACATGGGAGATAAGATTTAAATTTTTCAATAGTTAAACTGCTGTCTAATATGACACCCAGATCTTTTATAGTAGAGCTAACGCTAACTCTGTATCCCTCTAATTGTAGGTTGAGTTGTGAGATCTGCCCTGTACAGGATTTAGGCCCAATAAGTAAGAATTCTGTTTTGTCTGATTTCAAATCAACTTTCAGGTTTTGTGTGAATCAGCTGACAGACAGCGGTATTGAGGTTCTGGCTGAGGAACTCATCAGATA[T/A]AAAATCGTGAAGGTGTTGGGGTGAGTTTACGGTTTACGGTTCATCTGTTTATCTTATGTTGTATAGACCTCTTTGACTTTGTTTTCTGCATCCACAGCCTTTACCAAAACCACATCACAGATGTTGGAGCCAAACAAGTAGCAAAGATCATTGAAGAATGTCCACATTTGAGGACCGTCAAGTGAGTAAACCAGGAATAAACCCTCGCAGAACAAAAACACTCCTGACGGGGGAATATTTTTCACTAGCATTCGTTCAAACAGCGTGATTTTGGGGGGATTTTGCATTTATACATATATTTATTCATAGTGCTCAGCATAAATGAGTACAGCTCCTTTTGAAAATGAGTTTCTCAGTGAAAATAGACAATAACTGTTGGAGTGTTTAAACTAAATCTTATAAATGTACACACAGATAATGCATGGTGGTCACTTGTTTGTGTTTTGCACAGGCTCGGCTGCAACAACATCACAAGTGTAGGTGGGAAATATCTCGCCAGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17969
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000052749 | Essential Splice Site | 784 | 947 | 5 | 11 |
Genomic Location (Zv9):
Chromosome 16 (position 57296359)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 16 | 54032943 |
GRCz11 | 16 | 53718440 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAACAAGTAGCAAAGATCATTGAAGAATGTCCACATTTGAGGACYGTCAA[G/A]TGAGTAAACCAGGAATAAACCCTCGCAGAACAAAAACACTSCTGRCGGGG
Long Flanking Sequence:
GAGATGGATAGCATACTTTGTTACTTAGCGATATTTCTCAGACGAAAGAAGGCAGTTTTTGTGACATGGGAGATAAGATTTAAATTTTTCAATAGTTAAACTGCTGTCTAATATGACACCCAGATCTTTTATAGTAGAGCTAACGCTAACTCTGTATCCCTCTAATTGTAGGTTGAGTTGTGAGATCTGCCCTGTACAGGATTTAGGCCCAATAAGTAAGAATTCTGTTTTGTCTGATTTCAAATCAACTTTCAGGTTTTGTGTGAATCAGCTGACAGACAGCGGTATTGAGGTTCTGGCTGAGGAACTCATCAGATATAAAATCGTGAAGGTGTTGGGGTGAGTTTACGGTTTACGGTTCATCTGTTTATCTTATGTTGTATAGACCTCTTTGACTTTGTTTTCTGCATCCACAGCCTTTACCAAAACCACATCACAGATGTTGGAGCCAAACAAGTAGCAAAGATCATTGAAGAATGTCCACATTTGAGGACCGTCAA[G/A]TGAGTAAACCAGGAATAAACCCTCGCAGAACAAAAACACTCCTGACGGGGGAATATTTTTCACTAGCATTCGTTCAAACAGCGTGATTTTGGGGGGATTTTGCATTTATACATATATTTATTCATAGTGCTCAGCATAAATGAGTACAGCTCCTTTTGAAAATGAGTTTCTCAGTGAAAATAGACAATAACTGTTGGAGTGTTTAAACTAAATCTTATAAATGTACACACAGATAATGCATGGTGGTCACTTGTTTGTGTTTTGCACAGGCTCGGCTGCAACAACATCACAAGTGTAGGTGGGAAATATCTCGCCAGCGCGATTCACAAGAGCAAATCTATCTTTGATATAGGGTGAGAATTCATCTTAGGGAACAATTAATCCTCACGTAAAAGAGCAGGTCATATGGGCTGTCAGAAATATCTTATTTGCTATGTATCTTCAATGTGAACTGTCTGCAAAGGTAAACAAAAATAGTGCATGATGAAGACATCGACTCT
Associated Phenotype:
Not determined