Busch Lab

ZMP

LOC100330810

Ensembl ID:
ENSDARG00000036308
Human Orthologue:
NOD1
Human Description:
nucleotide-binding oligomerization domain containing 1 [Source:HGNC Symbol;Acc:16390]
Mouse Orthologue:
Nod1
Mouse Description:
nucleotide-binding oligomerization domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:1341839]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa12613 Nonsense Available for shipment Available now
sa28761 Nonsense Mutation detected in F1 DNA Not yet available
sa39133 Nonsense Mutation detected in F1 DNA Not yet available
sa17969 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa12613
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052749 Nonsense 566 947 3 11
Genomic Location (Zv9):
Chromosome 16 (position 57299257)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 54030045
GRCz11 16 53715542
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGTCRTCACGTCTCTCCTGCATACCTTGCCTAAAAAACACAAAACCCAGA[G/T]AGAGCGATGCATTCCAGACCAACTTTCAATTCACTAATCTATTCCTGTGC
Long Flanking Sequence:
GCTTTAAGCATCTGCAATCAGTGTATGATGACTTTGAGTTGCCGGGTTCCTGTATCACACTCACAAATGTATTCCTGCTGCTCTCCGAGGTTTTTCTCGGACACTCAACTGCACGTCCTGGACTCCTAAGGCGAACATTGAGATGTCCTACGGAGACCTTTAAAGCTGGTGAACAGAAGCTTTCGGGATTTGCTCGACTAGCATTGCACGGTATTGAAACAAGTAAACTGGTGTTCACCTTAGATGAAGCGGTGTGCTGTGGATTAAACGATGAAGATCTTCAGTTTGGGTTTTTAAGACCTGCTTCGCATTACGATTCTTCATCCGCAAGCTCCTTCGAGTTCCTCCACGAGACTCTCCAAGCCTTCCTTGCAGCCTTTTCTCTAGTTCTGGATGCAAAACTAAATCCAGAGTCAATCCTAAAGTTCTTCTCTAAATGCAAATACAAGAAGTCGTCACGTCTCTCCTGCATACCTTGCCTAAAAAACACAAAACCCAGA[G/T]AGAGCGATGCATTCCAGACCAACTTTCAATTCACTAATCTATTCCTGTGCGGACTTTTGTCTAAATCCAACGCAGCTCTCCTGGAGCATCTCGTCCCGCCGTCGGCATTGAAGCAGAAACGCAAGATACTGAAATCGTATTTATCGAACAGCGTGAAAACTCATCTTAAGAGCCTCCCTCGGTCTCCGTCCACAGACATCGAAGGAGATAAAGTGCACGCGATGCCCAACTTCCTGTGGATGCTGCGCTGCATATTTGAGACAAACAGCGAGGACGTGGCCAAGATGACAGCTAACGGCATATCTGCAGATTATATTAAGATTGCGTTCTGTAATATTTACTCTGCCGACTGCAGTGCTTTGAACTTCGTGCTGCACCATCGTAGGAAGCATTTGGGAGTCGATATGGACAATAATAACATTAACGATTATGGCGTGAAGCAACTGCGACCCTCTTTCAGCAAAATGACGGTAGTGAGGTAAGAAAGCAGACAGAGTTTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa28761
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052749 Nonsense 670 947 3 11
Genomic Location (Zv9):
Chromosome 16 (position 57298943)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 54030359
GRCz11 16 53715856
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AACAGCGAGGACGTGGCCAAGATGACAGCTAACGGCATATCTGCAGATTA[T/A]ATTAAGATTGCGTTCTGTAATATTTACTCTGCCGACTGCAGTGCTTTGAA
Long Flanking Sequence:
GATTCTTCATCCGCAAGCTCCTTCGAGTTCCTCCACGAGACTCTCCAAGCCTTCCTTGCAGCCTTTTCTCTAGTTCTGGATGCAAAACTAAATCCAGAGTCAATCCTAAAGTTCTTCTCTAAATGCAAATACAAGAAGTCGTCACGTCTCTCCTGCATACCTTGCCTAAAAAACACAAAACCCAGAGAGAGCGATGCATTCCAGACCAACTTTCAATTCACTAATCTATTCCTGTGCGGACTTTTGTCTAAATCCAACGCAGCTCTCCTGGAGCATCTCGTCCCGCCGTCGGCATTGAAGCAGAAACGCAAGATACTGAAATCGTATTTATCGAACAGCGTGAAAACTCATCTTAAGAGCCTCCCTCGGTCTCCGTCCACAGACATCGAAGGAGATAAAGTGCACGCGATGCCCAACTTCCTGTGGATGCTGCGCTGCATATTTGAGACAAACAGCGAGGACGTGGCCAAGATGACAGCTAACGGCATATCTGCAGATTA[T/A]ATTAAGATTGCGTTCTGTAATATTTACTCTGCCGACTGCAGTGCTTTGAACTTCGTGCTGCACCATCGTAGGAAGCATTTGGGAGTCGATATGGACAATAATAACATTAACGATTATGGCGTGAAGCAACTGCGACCCTCTTTCAGCAAAATGACGGTAGTGAGGTAAGAAAGCAGACAGAGTTTGGGAGAGAGCAGTGTTTCCCAAGACCATTATTATTTAATTATTCAGTCGATCAATTTTATTTGCTTTATATAACGGCAGATTACAACAAAAATCATTTAGAGGACACCTATTATGCTCCTTTTTACAAGACACATTTGAAGTCAGAATTATTAGCCCCCTTTTAAGTTTTTTTCTTTATCAAATATTTCCCAAATGATGTGTAACAGAGCAAGGAAATGTTCACAGTATGTCTGATAATATTTTTTCTTCTGCAGAAAGTCTTATTTGTTTTATACTGGCTAGAATAAAACAATATTATTATTATATTACAATAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa39133
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052749 Nonsense 746 947 4 11
Genomic Location (Zv9):
Chromosome 16 (position 57296541)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 54032761
GRCz11 16 53718258
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGCTGACAGACAGCGGTATTGAGGTTCTGGCTGAGGAACTCATCAGATA[T/A]AAAATCGTGAAGGTGTTGGGGTGAGTTTACGGTTTACGGTTCATCTGTTT
Long Flanking Sequence:
AGTGTAAGGAGGATAACATTGGGGTGATATGATCATATTTTCTAGACCTGGTAAGAACTCAGGCAGCTGCGTTTTGTACTAGCTGAAGTTTGTTAATAGAGGATGCTGGGCAGTTAGCAAACCAAGCATTACAGTAATCCAGCCTAGAGCTCATAAAAGCATGGACTAGCTTTTCTGCATCTGAGATGGATAGCATACTTTGTTACTTAGCGATATTTCTCAGACGAAAGAAGGCAGTTTTTGTGACATGGGAGATAAGATTTAAATTTTTCAATAGTTAAACTGCTGTCTAATATGACACCCAGATCTTTTATAGTAGAGCTAACGCTAACTCTGTATCCCTCTAATTGTAGGTTGAGTTGTGAGATCTGCCCTGTACAGGATTTAGGCCCAATAAGTAAGAATTCTGTTTTGTCTGATTTCAAATCAACTTTCAGGTTTTGTGTGAATCAGCTGACAGACAGCGGTATTGAGGTTCTGGCTGAGGAACTCATCAGATA[T/A]AAAATCGTGAAGGTGTTGGGGTGAGTTTACGGTTTACGGTTCATCTGTTTATCTTATGTTGTATAGACCTCTTTGACTTTGTTTTCTGCATCCACAGCCTTTACCAAAACCACATCACAGATGTTGGAGCCAAACAAGTAGCAAAGATCATTGAAGAATGTCCACATTTGAGGACCGTCAAGTGAGTAAACCAGGAATAAACCCTCGCAGAACAAAAACACTCCTGACGGGGGAATATTTTTCACTAGCATTCGTTCAAACAGCGTGATTTTGGGGGGATTTTGCATTTATACATATATTTATTCATAGTGCTCAGCATAAATGAGTACAGCTCCTTTTGAAAATGAGTTTCTCAGTGAAAATAGACAATAACTGTTGGAGTGTTTAAACTAAATCTTATAAATGTACACACAGATAATGCATGGTGGTCACTTGTTTGTGTTTTGCACAGGCTCGGCTGCAACAACATCACAAGTGTAGGTGGGAAATATCTCGCCAGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17969
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000052749 Essential Splice Site 784 947 5 11
Genomic Location (Zv9):
Chromosome 16 (position 57296359)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 54032943
GRCz11 16 53718440
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAACAAGTAGCAAAGATCATTGAAGAATGTCCACATTTGAGGACYGTCAA[G/A]TGAGTAAACCAGGAATAAACCCTCGCAGAACAAAAACACTSCTGRCGGGG
Long Flanking Sequence:
GAGATGGATAGCATACTTTGTTACTTAGCGATATTTCTCAGACGAAAGAAGGCAGTTTTTGTGACATGGGAGATAAGATTTAAATTTTTCAATAGTTAAACTGCTGTCTAATATGACACCCAGATCTTTTATAGTAGAGCTAACGCTAACTCTGTATCCCTCTAATTGTAGGTTGAGTTGTGAGATCTGCCCTGTACAGGATTTAGGCCCAATAAGTAAGAATTCTGTTTTGTCTGATTTCAAATCAACTTTCAGGTTTTGTGTGAATCAGCTGACAGACAGCGGTATTGAGGTTCTGGCTGAGGAACTCATCAGATATAAAATCGTGAAGGTGTTGGGGTGAGTTTACGGTTTACGGTTCATCTGTTTATCTTATGTTGTATAGACCTCTTTGACTTTGTTTTCTGCATCCACAGCCTTTACCAAAACCACATCACAGATGTTGGAGCCAAACAAGTAGCAAAGATCATTGAAGAATGTCCACATTTGAGGACCGTCAA[G/A]TGAGTAAACCAGGAATAAACCCTCGCAGAACAAAAACACTCCTGACGGGGGAATATTTTTCACTAGCATTCGTTCAAACAGCGTGATTTTGGGGGGATTTTGCATTTATACATATATTTATTCATAGTGCTCAGCATAAATGAGTACAGCTCCTTTTGAAAATGAGTTTCTCAGTGAAAATAGACAATAACTGTTGGAGTGTTTAAACTAAATCTTATAAATGTACACACAGATAATGCATGGTGGTCACTTGTTTGTGTTTTGCACAGGCTCGGCTGCAACAACATCACAAGTGTAGGTGGGAAATATCTCGCCAGCGCGATTCACAAGAGCAAATCTATCTTTGATATAGGGTGAGAATTCATCTTAGGGAACAATTAATCCTCACGTAAAAGAGCAGGTCATATGGGCTGTCAGAAATATCTTATTTGCTATGTATCTTCAATGTGAACTGTCTGCAAAGGTAAACAAAAATAGTGCATGATGAAGACATCGACTCT
Associated Phenotype:
Not determined