Busch Lab

ZMP

si:ch211-136i24.1

Ensembl ID:
ENSDARG00000079496
ZFIN ID:
ZDB-GENE-081031-9
Description:
Novel protein similar to vertebrate bicaudal D homolog 1 (Drosophila) (BICD1) [Source:UniProtKB/TrEM
Human Orthologue:
BICD1
Human Description:
bicaudal D homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:1049]
Mouse Orthologue:
Bicd1
Mouse Description:
bicaudal D homolog 1 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:1101760]

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
sa16298 Nonsense Available for shipment Available now
sa17748 Nonsense Available for shipment Available now
sa14781 Nonsense Available for shipment Available now
sa390 Nonsense Available for shipment Available now
sa36586 Splice Site, Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa16298
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000112671 None 222 854 4 8
ENSDART00000140854 Nonsense 222 820 4 7
ENSDART00000112671 Nonsense 222 854 4 8
ENSDART00000140854 Nonsense 222 820 4 7
Genomic Location (Zv9):
Chromosome 18 (position 11553609)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 12136539
GRCz11 18 12105257
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGTGCTTGAAGAAGAAACGGTGCTGCTCAACAGTCAATTAGAAGAYGCTT[T/A]ACGGTTAAAAGACATTTCCCAAGGCCAGTTGGAGGAAGCGTTGGATTCTC
Long Flanking Sequence:
ACAGTCTTTAGAAAATGTAAAGATGGAATATTGTTTTTTTTTTTTTGGTATTAAAAAGACTCCTTACAATAATTTTTCTTAATTTATATATTTATTTTATGGCTATAATTATTGGAATTGTAATGACTTTTATTTGAAATGAGTGACAGTGTGTCTTATTTTATTATTTTTATTTATTTTTATAAGTATTTATGTATTTGTTTGTTTGTTTATTTCTTTTATTATTATCATAATAATAATAATAATAATAATTATTATTATTATTATTATTAACTATAATAATAATAATAATAATAATATAATCATTATTATCATCATCATCATTATTAATATTATTATATTTTTTATTATCATCATTATTATTATCATTATTATGATTATTATATTCCACAGTTGAGTGTCCATTTATTTCTCACAGGTGGAATATGAGGGTCTAAAGCATGAAATCAAAGTGCTTGAAGAAGAAACGGTGCTGCTCAACAGTCAATTAGAAGATGCTT[T/A]ACGGTTAAAAGACATTTCCCAAGGCCAGTTGGAGGAAGCGTTGGATTCTCTGAAGAGCGAACGAGAGCAGAAGAACAATCTGAGAAAAGAGCTGGCTCATCATCTCAGCCTGACTGACAGTGTTTATGGAGCCAGCACTCACCTGGCCATCTCTGCCGTGGAGGGTCTGAAGTTTGCAGAGGAGGCTGCGACCAATGGCACGTCTGCTTCCGGGACCAGTCCTAACAACGAGGACAGCAACCGGTGTAATAATGAGTGTAATGGACATGGACCAAAAGGAGAATACCATCGCAGGAAGACAGAGATGCTCCCGGTGTCTGATCTCTTCAGTGAACTCAACCTGTCTGAGATACAGAAACTCAAGCAGCAGCTCATACAGGTCAGTCGAAAAAGATGGGATAATCTGATTATAATATACAGTTTAAGTCTGAATTATTAGCCCCCTCTATATTTTTGTCACCAATTTCTGTTTAATGAAGAGAAGATTTTCTTTAATACAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17748
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000112671 None 222 854 4 8
ENSDART00000140854 Nonsense 222 820 4 7
ENSDART00000112671 Nonsense 222 854 4 8
ENSDART00000140854 Nonsense 222 820 4 7
Genomic Location (Zv9):
Chromosome 18 (position 11553609)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 12136539
GRCz11 18 12105257
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGTGCTTGAAGAAGAAACGGTGCTGCTCAACAGTCAATTAGAAGAYGCTT[T/A]ACGGTTAAAAGACATTTCCCAAGGCCAGTTGGAGGAAGCGTTGGATTCTC
Long Flanking Sequence:
ACAGTCTTTAGAAAATGTAAAGATGGAATATTGTTTTTTTTTTTTTGGTATTAAAAAGACTCCTTACAATAATTTTTCTTAATTTATATATTTATTTTATGGCTATAATTATTGGAATTGTAATGACTTTTATTTGAAATGAGTGACAGTGTGTCTTATTTTATTATTTTTATTTATTTTTATAAGTATTTATGTATTTGTTTGTTTGTTTATTTCTTTTATTATTATCATAATAATAATAATAATAATAATTATTATTATTATTATTATTAACTATAATAATAATAATAATAATAATATAATCATTATTATCATCATCATCATTATTAATATTATTATATTTTTTATTATCATCATTATTATTATCATTATTATGATTATTATATTCCACAGTTGAGTGTCCATTTATTTCTCACAGGTGGAATATGAGGGTCTAAAGCATGAAATCAAAGTGCTTGAAGAAGAAACGGTGCTGCTCAACAGTCAATTAGAAGATGCTT[T/A]ACGGTTAAAAGACATTTCCCAAGGCCAGTTGGAGGAAGCGTTGGATTCTCTGAAGAGCGAACGAGAGCAGAAGAACAATCTGAGAAAAGAGCTGGCTCATCATCTCAGCCTGACTGACAGTGTTTATGGAGCCAGCACTCACCTGGCCATCTCTGCCGTGGAGGGTCTGAAGTTTGCAGAGGAGGCTGCGACCAATGGCACGTCTGCTTCCGGGACCAGTCCTAACAACGAGGACAGCAACCGGTGTAATAATGAGTGTAATGGACATGGACCAAAAGGAGAATACCATCGCAGGAAGACAGAGATGCTCCCGGTGTCTGATCTCTTCAGTGAACTCAACCTGTCTGAGATACAGAAACTCAAGCAGCAGCTCATACAGGTCAGTCGAAAAAGATGGGATAATCTGATTATAATATACAGTTTAAGTCTGAATTATTAGCCCCCTCTATATTTTTGTCACCAATTTCTGTTTAATGAAGAGAAGATTTTCTTTAATACAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14781
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000112671 Nonsense 431 854 5 8
ENSDART00000140854 Nonsense 431 820 5 7
Genomic Location (Zv9):
Chromosome 18 (position 11560011)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 12142941
GRCz11 18 12111659
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTTGCTGTGAGTTTGARACWGACATCAATGGAATAGAGCTTYTAGAGTGC[A/T]AATACAGAGYTGCCGTGACTGAGGTCATTGACTTGAAGGCGGAGCTTAAG
Long Flanking Sequence:
ATAATGCATGTTTGTTTGTGTTGGAGACGTTTCTGGGATTAGGGGACTTAAATAAACCTGCAATGTTTGGAAATGTAAAAGAACTTAATGGATAAATAAATAAATGTATTTTTGTTCATTTAACTAAAATAAATTATTACATAAATACAAATTATTTATTTAAATGTTTATGTATTATTAAATTAATAAATACTTGTATTTTATTAAATATGTATTAGTTTTTATGTGTTCACTTTTATATTTTTTTCCACCAGGTTGAGCGAGAGAAAGCAATTCTACTTACCAACCTGCAGGAGTCTCAAACTCAACTGCAGCACACGCAGGGTGCTTTAACTGAGCAGCACAGACGTGTTCACCGCCTTACGGAACGTGTTAATGCTATGAAACGCCTCCACAATGACAAGGAGTTTGACACAGAAGAGTCCGAGAAGGGCGACGGTCCTATTAACGGTTGCTGTGAGTTTGAAACAGACATCAATGGAATAGAGCTTCTAGAGTGC[A/T]AATACAGAGTTGCCGTGACTGAGGTCATTGACTTGAAGGCGGAGCTTAAGGTGTTGAAGGAAAAGTATAACCAGTCTTTGGAGAGCCAATCAGAAGAGAGCAACCACAGCGAAGGGAAGGTCCAGGCGCTTGAAGAACAGGTGAAACAACTGGAGAAAAGCTGTCGTGAGGCACGTGAGCGGGTCAGCAGTCTGGAAGCTGAGCTTCGGTGTGCTTCTGGAATGGCCAGCGAAAGTAACGGCATGCTGAATGCAGCTCAAGATGAGCTGGTTACATTTAGCGAGGAACTTGCTCAGCTCTACCACCACGTCTGCTTGTGCAACAATGAAACGCCAAATCGTGTCATGCTGGACTACTACCGTCAGAGTCGGGTCACACGTAGTGGCAGTCTCAAAGGCCCAGAAGACCCACGAGCCCTGCTTTCTCCACGTTTAGCTCGGCGTCTTGCAGCTGTGAACTCCTCAGACATGTCCAAGAGTCCTCAAGACTCTCCTTCGAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa390
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000112671 Nonsense 613 854 5 8
ENSDART00000140854 Nonsense 613 820 5 7
Genomic Location (Zv9):
Chromosome 18 (position 11560557)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 12143487
GRCz11 18 12112205
KASP Assay ID:
554-0252.1 (used for ordering genotyping assays)
KASP Sequence:
CGAAGGAACCCCTTGGAGACGGAATTAAAGGGGAAGGAGGAAGTCCCAAT[A/T]GAACCCCATTTGGCTCACCAATCAATGGTTCATCTCTCTCATCCTCCACA
Long Flanking Sequence:
TTAAGGTGTTGAAGGAAAAGTATAACCAGTCTTTGGAGAGCCAATCAGAAGAGAGCAACCACAGCGAAGGGAAGGTCCAGGCGCTTGAAGAACAGGTGAAACAACTGGAGAAAAGCTGTCGTGAGGCACGTGAGCGGGTCAGCAGTCTGGAAGCTGAGCTTCGGTGTGCTTCTGGAATGGCCAGCGAAAGTAACGGCATGCTGAATGCAGCTCAAGATGAGCTGGTTACATTTAGCGAGGAACTTGCTCAGCTCTACCACCACGTCTGCTTGTGCAACAATGAAACGCCAAATCGTGTCATGCTGGACTACTACCGTCAGAGTCGGGTCACACGTAGTGGCAGTCTCAAAGGCCCAGAAGACCCACGAGCCCTGCTTTCTCCACGTTTAGCTCGGCGTCTTGCAGCTGTGAACTCCTCAGACATGTCCAAGAGTCCTCAAGACTCTCCTTCGAAGGAACCCCTTGGAGACGGAATTAAAGGGGAAGGAGGAAGTCCCAAT[A/T]GAACCCCATTTGGCTCACCAATCAATGGTTCATCTCTCTCATCCTCCACAATTCCAGAGACAGGTGATCTCCGCAGGGAGCCCATGAACATCTATAACCTCAACGCCATCATCCGTGACCAAATCAAGCACCTGCAGAAGGCTGTAGACCGCTCTCTCCAGTTGTCCAGGCAGAGGGCTGCTGCTAGAGAGTTGGCGCCTATCCTCGATAAGGACAAGGAGGCCTGCATGGAGGAGATCCTGAAACTCAAATCGCTCCTGAGCACCAAAAGAGAGCAGATCGCCACCTTACGTCTTGTCCTAAAAGCCAACAAACAGGTAGAAGACCAAGTCTTTGCAAGAACTACTTTTAAATTGAGTAATAAAAGCAAACCTAAAAGAACATTATATCTTTGTCATATTTGTTTCTAGACTGCTGAGGTGGCCCTGGCAAACCTCAAGAGCAAGTATGAAAATGAGAAATGCATGGTGACGGAGACAATGATGAAGCTTAGGAATGAA
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
sa36586
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Splice Site, Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000112671 Splice Site, Nonsense 718 854 5 8
ENSDART00000140854 Splice Site, Nonsense 718 820 5 7
Genomic Location (Zv9):
Chromosome 18 (position 11560872)
Other Location(s):
Assembly Chromosome Position
GRCz10 18 12143802
GRCz11 18 12112520
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAAAAGAGAGCAGATCGCCACCTTACGTCTTGTCCTAAAAGCCAACAAA[C/T]AGGTAGAAGACCAAGTCTTTGCAAGAACTACTTTTAAATTGAGTAATAAA
Long Flanking Sequence:
GTCAGAGTCGGGTCACACGTAGTGGCAGTCTCAAAGGCCCAGAAGACCCACGAGCCCTGCTTTCTCCACGTTTAGCTCGGCGTCTTGCAGCTGTGAACTCCTCAGACATGTCCAAGAGTCCTCAAGACTCTCCTTCGAAGGAACCCCTTGGAGACGGAATTAAAGGGGAAGGAGGAAGTCCCAATAGAACCCCATTTGGCTCACCAATCAATGGTTCATCTCTCTCATCCTCCACAATTCCAGAGACAGGTGATCTCCGCAGGGAGCCCATGAACATCTATAACCTCAACGCCATCATCCGTGACCAAATCAAGCACCTGCAGAAGGCTGTAGACCGCTCTCTCCAGTTGTCCAGGCAGAGGGCTGCTGCTAGAGAGTTGGCGCCTATCCTCGATAAGGACAAGGAGGCCTGCATGGAGGAGATCCTGAAACTCAAATCGCTCCTGAGCACCAAAAGAGAGCAGATCGCCACCTTACGTCTTGTCCTAAAAGCCAACAAA[C/T]AGGTAGAAGACCAAGTCTTTGCAAGAACTACTTTTAAATTGAGTAATAAAAGCAAACCTAAAAGAACATTATATCTTTGTCATATTTGTTTCTAGACTGCTGAGGTGGCCCTGGCAAACCTCAAGAGCAAGTATGAAAATGAGAAATGCATGGTGACGGAGACAATGATGAAGCTTAGGAATGAACTCAAGGCTCTCAAAGAAGACGCAGCCACCTTTTCCTCACTGAGGGCAATGTTTGCAACAAGGTACATTTTTAGCTCTTGTCTGCAGTTAACATTATATACATTTTCTGCCGCTCTCCTCCAACTTAAAAGGTCTTCTGATGTAGTTCAAATGCTATGTTTCCATCCAAAGATGTTAATCAAAATTATGTGTTAAACTGGAATATCGCATAAAACATTTGCGAATAAAGCATTGTTTCAATCCGATGAGTTAAAGAGTACACAATCATCATTTCCTGATAAACTGATGCCAAATATTAAAAAGAAAATGGTTGAA
Associated Phenotype:
Not determined