ZMP
snx5
Ensembl ID:
ZFIN ID:
Description:
sorting nexin-5 [Source:RefSeq peptide;Acc:NP_999934]
Human Orthologue:
SNX5
Human Description:
sorting nexin 5 [Source:HGNC Symbol;Acc:14969]
Mouse Orthologue:
Snx5
Mouse Description:
sorting nexin 5 Gene [Source:MGI Symbol;Acc:MGI:1916428]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa38956 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa45494 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa38956
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000020350 | Essential Splice Site | 234 | 399 | 7 | 13 |
Genomic Location (Zv9):
Chromosome 13 (position 33875068)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 33541048 |
| GRCz11 | 13 | 33650593 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATCAAAGATTCCACAGCTAAGGCTGAGAAAATGACCCGTTCACACAAAAG[T/C]GAGACCATGAAGCAATCGGCTGGATGCTTATCATTTATTGGTTAATACTG
Long Flanking Sequence:
TCATGACTGGACTATTGCTTAAAAAAACTTTAAAACTAAGCCTTAATCTGTAAGTCTTGTATTATTCAGATAAGTGTCTGTTATGCTGATAACAAAGACAAGTGACCTTTTTGGATCTGAGCCAGTGGTGATAAAGAGCACACACTATACTTCTGCATTCTGATTGGTTCATATTGTGCGTGACTCTGTAATCCTCTTCTCATTTGGGCTTTAGCTCAGCGTGAGGCGGAAAAATGCCAAGGAAATGTTTGGTGGTTTCTTTAAGAACATGGTGAAGACCGCTGATGAGGTCCTCATCTCAGGGGTCAAGGTTAGTGCATCATGCAGCTCTCTTTGGGGTGTTTTTAAAATCATCTCATGTCATAAAACACAAGTTTAAACTTTATTTTGCAGGAGGTTGATGAGTTCTTTGAACAGGAGAAGACTTTTCTGCTGGATTACTCTAATAAAATCAAAGATTCCACAGCTAAGGCTGAGAAAATGACCCGTTCACACAAAAG[T/C]GAGACCATGAAGCAATCGGCTGGATGCTTATCATTTATTGGTTAATACTGACTTTTATTTTCTTTTTCTTTTCTAAGATGTTGCTGATGATTATAACCACATTTCCGGGGCTCTGAACAGTGTTGCAGCTGACAACAACTCTGCCTTTAAAAAGTGAGAAATGTATTATATTTCATATATTTTACAGTGAAAACAGCATTTAAGTGAAGCAAAAATGTTGAATTATACAGAAAACAAAACAGCTTTGTGTGATCGAGGTTCAGTTTAAATATATTTTATAGTTACTTTTTTAACTTTCTTCATCAAATTGTATTATTTTCAGTTAGAAATGACAGTATTTTGGGGAATTTTAAAAGTATATTGAGAAGTCTTTTGAAATATCTTCAAATGTTTTTGTGGATTGTGACAGTTTAAATTTGAAGATGTAAGAATTTGCTCTTTTACTGCCTAATTTTTCATTTTCTTTCTCTTTTCCAGGCACTTGGAAAAATGTGTTGAAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa45494
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000020350 | Nonsense | 373 | 399 | 12 | 13 |
Genomic Location (Zv9):
Chromosome 13 (position 33872676)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 33538656 |
| GRCz11 | 13 | 33648201 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCACCAGCTTCAAGGCAAGACGTGTAGTAGCCTTTCGTAAGAACCTGATC[G/T]AGATGACTGAGCTGGAAATAAAACATGCCAAGGTGAGGATGATGATTTGT
Long Flanking Sequence:
TTCTAAACTTTCCTTGTATGTCCTTATACTCCAATATATAATGCTAGTATTATGGCTAGGACAAAGACACATATAATTGAGTACTTTATTATTGTGCATTAGAATATTTTACATTTACTATCTTTGCAGATTATAAATGTAACCACCCAATTGCCCCCCTCAAAAGTGTTTAAGACCTGTGGTGTTTCTCTTTATTGTATGAAACATGTGAATATGAGCACAATTGGGCTGTAACATTATAACACTGCATGGTTCACACCGCAATCTGCTTTAACATTGCAAAGATGATGCAATAATAACCCCAGGTCTAACCTTTCTTCTAAATTACAAGTGAGAAACAATTATCTATCTGGTTATTTATAATTTTGTTAACCCAGGGTTAAGCACAGTATAAAAAATCCTAACTTTTTTCCGTAAGTAACTTGCTCTCATTTATTATTTTTGTAGAGCTCACCAGCTTCAAGGCAAGACGTGTAGTAGCCTTTCGTAAGAACCTGATC[G/T]AGATGACTGAGCTGGAAATAAAACATGCCAAGGTGAGGATGATGATTTGTCACATGTATCAAGTCTCCATGGAAAAATCTGGTATTATTAGAGAAGTTAAAATTTGGGTGATTTCCTGATATGTCCCTAGTTTGATTCTCAATATTTAAATATATGCGTGTTAAACAAAAGTTATTGGTCACAAATGCTTTTTTCAGCAATGCTGTATTAAACTCATCATTGCTGATTAAAAGCACAACATTCTATATGTCAAAGAAAAAAAATCTATCATAGTTTTAAAGTATTGATTCGCAGAGTTATTTTCAAGAGTTATCATAAGAAATTGTTCTGGAGCACAAAATCAATTCCTAAGAATGGTTCCCAAAGGACCATCTGACAAAAAAACTGGAGTAATGATACTAAATTTCTGCTTTTGTACAGGAATAAATGACATATTTTAAAATATTTGCAAATAGAAACGTCATTTTAAATATTAATATACACAAAATATGCTAAATGTT
Associated Phenotype:
Not determined