ZMP

slc4a11

Ensembl ID:

ENSDARG00000075532

ZFIN ID:

ZDB-GENE-090313-183

Description:

sodium bicarbonate transporter-like protein 11 [Source:RefSeq peptide;Acc:NP_001153300]

Human Orthologue:

SLC4A11

Human Description:

solute carrier family 4, sodium borate transporter, member 11 [Source:HGNC Symbol;Acc:16438]

Mouse Orthologue:

Slc4a11

Mouse Description:

solute carrier family 4, sodium bicarbonate transporter-like, member 11 Gene [Source:MGI Symbol;Acc:

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa38927	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa35444	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa38927

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000113089	Essential Splice Site	86	846	4	20
ENSDART00000127417	Essential Splice Site	86	857	4	21

Genomic Location (Zv9):

Chromosome 13 (position 13682134)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	13	13690129
GRCz11	13	13821121

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TATAGAAACTGATGTCCATGGCTGTGTGCTGCTTAACACGTCTCGAAGGG[T/C]GAGATTTTTTTTCATTGCATTCCACATGCCAACCTGATATTATAAAACGC

Long Flanking Sequence:

AGGCTGTCTGCTTTGTATAATCTCTATATGGAAGAGGACTTAGCATGCAGGCATCACGTGAGGGGTTCAGGATGAACCTGCAAACCTGAGGACAATGCCAAATGCGAATTAAGCAAATAAAGGACAAGAGAACATCCCGTCCCTTCAGAGTTTAGATGATGCTCATGATGCATTCGCTGGATACTGATAAACAGTATTGTGGGTGCGATGTTGTATTGTGCTTTCAGGGACTCGTTTCATAGCTGATATTTGTGATGCTGAGATAACAATAGGGGCTCTCTCAGATGCAGATGGCTTTTATGTTCACTGCTGGTGTTTTTTGAAGCACTTTTATGATATGGGAGTGTTTTCTCTGAAACTAGCTGTTTTTAAAAACTCTGCTTTATGATGGTTGCTGTTGTTGTTTTGGCATGCAGTATTCACCCCTCGGGCTTCCCGTTCTCTCTTTCCTATAGAAACTGATGTCCATGGCTGTGTGCTGCTTAACACGTCTCGAAGGG[T/C]GAGATTTTTTTTCATTGCATTCCACATGCCAACCTGATATTATAAAACGCATAGCATCCATCTGAATTATTGGCACACCTGTGTCTGCACAATAACTAAATAAATAAGTCTTCATGCATTGGGGCCCAATAATCTAAGGTTAATTTAGCATTTAAACATTAAAGTTTTAGAATTTTGGTTTTAGAAATATTTCACATAAGATGATTTTCAACAATGTTTGTGACTGGATAACATGATCATCAGTTTTTACTCAATATTAAAACATTCTTGAATTTACATTAGATTTACTACACTGTAGGGCTGTGCAACTAATCGAAAATCCGATTTTGATTTTGGCTTCTAACGATTATGAAAAACCATTAATCGAGAAAAACGATTATTACATCATATACCAAAAGCGCGAAAGACCGCGTGCTTATGTGTGTGTGCACCACGCTCACACACATAAGCACGTGGTCAGCATTCGGTCTCATTCACACACTGAGACGAGCAGAGGAGCG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa35444

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000113089	Nonsense	191	846	7	20
ENSDART00000127417	Nonsense	202	857	8	21

Genomic Location (Zv9):

Chromosome 13 (position 13725738)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	13	13733733
GRCz11	13	13864725

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GTAAATCGTAAGAGGATTTATGATGATTTATGAACTCTCTGTGACAGCTG[T/A]AATGTGAAGAACCTGCAGAGGCGGCACGTGTGTATCTCACGTCTGGATCG

Long Flanking Sequence:

AACTGTGTCAAAATACAAAAAAAAAAAAAAAAAGAAATTGCAGTTTGTGGTTAATTCTAAAGTGTAACTTTTTAAGGTGGATTTTAAATAAATTGGATGAGGAACAAAGTATTTAAATTGTGTTCCTTATACCGACCTTTATGGTAATATTTGATTAATTTCACTTACTATATATAAAATGACTCAGTCAAGAGCACTAAGTGGATCTTTTCTTTTTAATATGGTTAATTGAGTTGATAATAACCTCAGACTTGTGCGCATTTTTATAACTTTATACCCGTTTATGGGTTTGCCCATCGTCCCACAAGCAGATCTTCCTTTGACACCCCTGTTCAAGAGCTTTCTGTAATCCCATTAGACCTCAACCAATGGATTTGTTAATGTGTTTGCTGTACTCCTGTTACATATTGAATTAATCTGATACTGTGCCAGGTACATCAAAGCCCTGTTGTAAATCGTAAGAGGATTTATGATGATTTATGAACTCTCTGTGACAGCTG[T/A]AATGTGAAGAACCTGCAGAGGCGGCACGTGTGTATCTCACGTCTGGATCGGCCGCAGAACTGGGGGGAAAACTGCGCTGAGGTCCGTTACGTCATCCTCATCCTGGCACCTTCAAAGATGGTAATGGCCTCATTAATGTGCATAAAATGTATCGGGTGTGAGGACATTAGCTCAGGTTTATGTGAAAGAAATGGCTTTAATTGCAAATATTTGCTTAGTGTAAGATCTGGAGGGAAAAGATGTTACACAAAAGTGTGTATGAAATAGTTTCAGTTGCTTTTAAAGGTGTTTTTAATATACATTAACCTGAACAAAACGTATTTATTATAGAGTTAGGAGTAGGGTTTAGTTTAAGATTAAATACATGTAATTAGTCTTAATTTACTATATGTGTAACATGAACACTGTAAATTTTAAGGGTGTTAAATAATTGAATATTAATTAATGAAATTTATGTTGTTTGTTCTGTTTTCTAAAGACTCTTTAGAATGTATTGTTTT

Associated Phenotype:

Not determined