ZMP
sdk2b
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate sidekick homolog family (Chicken) [Source:UniProtKB/TrEMBL;Acc:B
Human Orthologue:
SDK2
Human Description:
sidekick homolog 2 (chicken) [Source:HGNC Symbol;Acc:19308]
Mouse Orthologue:
Sdk2
Mouse Description:
sidekick homolog 2 (chicken) Gene [Source:MGI Symbol;Acc:MGI:2443847]
Alleles
There are 12 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa31893 | Nonsense | Available for shipment | Available now |
sa38902 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa12667 | Nonsense | Available for shipment | Available now |
sa24919 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa1344 | Essential Splice Site | Available for shipment | Available now |
sa35360 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa35359 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa2625 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa31893
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085121 | Nonsense | 367 | 2254 | 9 | 46 |
ENSDART00000140353 | Nonsense | 321 | 2035 | 8 | 44 |
Genomic Location (Zv9):
Chromosome 12 (position 39108379)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 12 | 37395793 |
GRCz11 | 12 | 37570535 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTCTCTTTTCCTTTTGATTTCAGGTGTTCCTCAGCCTGATATTGTGTG[G/A]TATAAAGATGCAGTTCCCATAAGCCCTGTGAAGACGCCGCGCTACAGAGT
Long Flanking Sequence:
TAATATATTAGTTAATGCTTTAGAACTAAATTAATTCTTAAATCATGTTTACCAACGATGGAAAACTTATAGAATAATCTTTAGTTCAACTTCTAAGTGTTTATTGTCATATGCACAGTAAGGAACAGGTTACCTGTACAAAATTCTTACTTTGCTATCCACACTGAATGCCCCCCACATTCTCACACAGTTCAAACGCTATACAGTAAGTGAATTGGGTAAACTAAATTGGCCATAATGTATGAGTGTGTGTGTGAATGTGAGAGTGTATGGGTGTTTCCCTAGTACAGGGTTGCAGCTGGAAGGGTATCCAGTGCGTAAAACATATGCCAAAATAGTTGGTGGCTCATTACACTGTGGCAACCCATGATAAATAAGGGACTAAGCCATAGGAAAATGAATGAATGAATGAAGGTACCATGATTACTCTAAACTATCATGTCATTCACATTTTCTCTTTTCCTTTTGATTTCAGGTGTTCCTCAGCCTGATATTGTGTG[G/A]TATAAAGATGCAGTTCCCATAAGCCCTGTGAAGACGCCGCGCTACAGAGTGTTGAGCGGCGGTAGCCTTCAGGTAAACGGCCTTCTGCCTGATGACACCGGGATGTTCCAGTGCTTCGCCCGAAACCAAGCTGGAGAGGTGCAGACCAACACCTACCTCGCAGTGACCAGTGAGTTCATCCACCCTTCCATCTCTTTCTCCTACTAATTTAAACATGGATATTGGATAAGAAGTGAAGTGTAAACAAATGACTATACTAATCATTAATGGTCAATACATTGTTAAACACAAAAGAGGATATTTAGAAAAATTATACTCGCTTGCACCCATTGACTTCCTTAGTATTTTTTCTTACTATGAAAGTCAATGGACGCCAGCAACCTTAAAAATACCTTCTTTTGTGTTCAGCAGAAGAAATAAACTCTTAAAACTTAAACACCACAGGAGAGAGAATAAATGATAAGGTCATTTTAATTTTTGGGTGAACCATCCCTTTTAGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa38902
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085121 | Nonsense | 795 | 2254 | 17 | 46 |
ENSDART00000140353 | Nonsense | 749 | 2035 | 16 | 44 |
Genomic Location (Zv9):
Chromosome 12 (position 39082800)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 12 | 37370214 |
GRCz11 | 12 | 37544956 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGGAGGATCTCATCATCTGGACTAATTATGAAATCGAAGTGGCGGCTTA[T/G]AATGGAGCTGGACTGGGGGTTTACTGTCATAAAGTTACAGAGTGGACACT
Long Flanking Sequence:
TGATGACAGTGAAATGGACTTTTTGTTCACTTATTTATATATTTCTTCTGTTCATCACTGAAGGAAGCTGAAGGCCGTCTTTGGTATTGCAAACCTAAGTAATGGTGCTTGACCTTGCTCGGTATTGCACAGAATATTTTTTTAGAGTGGTTCTTTATCGCCCTCTGTTGTTTGTAGATGGTAGTGCGCTTTAAAACCCAGCAGACAGATCTGATAATGAAGAGTAGATGACAAGGTGTATTTTTAGAGATGCTTATCGAGCTCTTCGGAGAGGGTTATCTTGGGAAATTCTCTGTCAAATCTCGCCTGTCCGTTCAGATGAGCAAATCTTTGCATCTGTCCTTGACAGTAACAATATAACCCTTCTCTAATCTCAGGTATCGTCTGACTGGTCTGCCTGTGGATATCCAGTATAAAAATATCTCGAACCCTGATGTCACCAACCTGCTGCTGGAGGATCTCATCATCTGGACTAATTATGAAATCGAAGTGGCGGCTTA[T/G]AATGGAGCTGGACTGGGGGTTTACTGTCATAAAGTTACAGAGTGGACACTTCAGGGAGGTGAGGGTTTATTTGTGATTGCTCCATTCATACTGTACTGCATAGATATATATGTTATATTATTATAGTTAGTATTAATAATTATTATAACATATAATGGTGTCATGGTGGCGCAGTGAGAAGCACGATCGCCTCACAGCAAGAAGGTCTCTAGTTTGAGTCCCAACTGGGTCAGTTTACATTTCTGTGTGAAGTTTGCATGTTCTTCCCATGTACGTGTGGGTTTCCTTTGGGTGCTCCGGTTTCCCTTATAGTCCAAAGACATGCACTATAGGTCAATTGAATAAGCTAAATTGGCTGTGGTGTATGTGTGTTTTCCAGTGATGGGTTGCAGCTGAAAGGGCATCCGCTGTGTAAAACCTATGCTGGATAAGTTGGTGGTTCATTCCCCCTGATTAATTAAGGGACTAAGCCAAAAAGAAAATTAATGAATAAATGAATA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12667
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085121 | Nonsense | 989 | 2254 | 21 | 46 |
ENSDART00000140353 | Nonsense | 943 | 2035 | 20 | 44 |
Genomic Location (Zv9):
Chromosome 12 (position 39073661)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 12 | 37361075 |
GRCz11 | 12 | 37535817 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AACGTGACTCTGGAGTACCGAGYGACCGGACTGACGGCTCTCACCACATA[C/A]ACCATTGAGGTGGCAGCCATGACCTCTAAAGGCCAGGGTCAGCTGTCATC
Long Flanking Sequence:
ATTAGATAAAAAAAACTAACAGACAACATCCATTTTAACAACGCTAAAGAGAAAATAATAATACAAATAAAAATGCATAATACAAAATCTAATAATAATAAAATAATACAATAATAATAATGAATAAATAATAAAAAAGTATATATATTTATAAAAATAAAAAATTGATTAAAAAGAAAATGATAATGGATATTAAAATAATAATAAATACATAAATAAATAATAAAATAAAATAAAATAAAATAAAATAAAATAAATTCAATTGTGGCATCCCATTACTCAATATACTGCAGTGAAATTCAGATAAGGAGTCCAGATTTGATGAAAACTCTGAGTAGACATAAGAACAACCCATAGTAAACAGTTTTATCTCATGTTTGTTTTTTAGGTTATCGTATATCATGGGAGGAGTACAACCGCACTAACACACGAGTTACACACTATCTGCCCAACGTGACTCTGGAGTACCGAGTGACCGGACTGACGGCTCTCACCACATA[C/A]ACCATTGAGGTGGCAGCCATGACCTCTAAAGGCCAGGGTCAGCTGTCATCCTCAACCATCTCTTCAGGAGTACCACCAGGTACAGTAATCAGACACTTACAAACCTGTCCAAACAGGTAATGAAATCTACACTTTAAAGTTCCCGTGAAGAGCTTTGTAACGTGCACTTTTTTTCAATGTTGGACGTAATTTCAACTGAAACACAAAAAGAAGGTGGGACATCGAGTAGCTCCTCTTCTTTTCCAAAAACAGCCAATAGCATTTGGTTTGTCACAGTTTTGCCAGTGAGAGTGGTTGAGATCAAATTAAATGCAAATGAGAAGCGTTAAAGAGGACGGGCCATGTCAGATACTAGAGAGCATTTGATTGGTCAAGATTTGATGAAAAACTACAGTATGAGGTGGCATGAAAATTATCGTTGATCCATTTCAGTGGATGTGACAGAAATTTTAGGAGTTTATATCAGGATTATTTTTATCTTATTTATAAATTATAGATAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa24919
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085121 | Essential Splice Site | 1261 | 2254 | 26 | 46 |
ENSDART00000140353 | Essential Splice Site | 1214 | 2035 | 25 | 44 |
Genomic Location (Zv9):
Chromosome 12 (position 39060374)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 12 | 37347788 |
GRCz11 | 12 | 37522530 |
KASP Assay ID:
554-7540.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGTTTGAAGTTCCGGAACCTGACCGGAATGGACTCATCCTAGGATATAAG[G/A]TCAGTGAGGAATTAAAATTAAACTAAAGGGTGTGATACAACAGACTGACA
Long Flanking Sequence:
GTGGGTTTTGGGATAAATAAGCGGGTGTTGAGGAAATTGGTAACACATGGCTCTGTGCACATGACTCTCCTGTATTTTCTTTTTTAGCCAATCAAATGTCTGCAATTCTGCTCTCAGTGTCCAGGGATTTGTGCCAGAGAGTGATTCTCTGTGTTACTCCCTTAATAATGATCAAATCCTGGTGTCTTCCAGGCCTCACTGCCGTTGCATTATGTGTATAGAAATCACACACTTAATCCCTTGCACACACATATATGCATTAAACACCCCCATTAAGGTCTTGGTACGCACAGACATATTCAAAACGGCTAATTTATCCACATAAGCCTTTTACGGAAGCATTCATCTGTTTGAAGCTTTCTGTCTTCCTCTGTTTTGCTGCAGTCCCCTCTTGTGGCCCCACAAATGTTTCTGCATTTGCTACTACCTCCAGCAGCATTCTGGTCCGCTGGTTTGAAGTTCCGGAACCTGACCGGAATGGACTCATCCTAGGATATAAG[G/A]TCAGTGAGGAATTAAAATTAAACTAAAGGGTGTGATACAACAGACTGACATCATAGGACTGAAATAGTGGTGCTTTGCATCACATCTTGGCTAAAAGACCTAAGCACACTGCAAAGACTTCCCAACATTCTCCTTTTGTACATGTCATCAGATGGGGAAGCCCCACCTATTAGTGACGATTTCTCCCTAATTAGCATAGAATGATTGTCTTGTCTTTTAATCTGCCACTATGCTGACACATAGGCATTTGTAGCCTCGCCCTCTTTTGAAAAGACCACAGTCTCATTTGAATTTATAGTGTCAGTCACCAAAATGGCGCAAATTGGATCAAAGCCTAAAATGGGTGGTTTTAAAGAGTTATAAAACATAATGTTTGGTATATTTTGCGCTGAAATGTCACATACACACTCGTATTGTGAAAAGCGGCATAATGGGTTCCCTTTATGGAAAAAAAAAAGTATTTTTTTTCTGAAAACAATACGATATGTGTCGCTTGTCTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1344
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085121 | Essential Splice Site | 1422 | 2254 | 29 | 46 |
ENSDART00000140353 | Essential Splice Site | 1375 | 2035 | 28 | 44 |
Genomic Location (Zv9):
Chromosome 12 (position 39058230)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 12 | 37345644 |
GRCz11 | 12 | 37520386 |
KASP Assay ID:
554-1258.1 (used for ordering genotyping assays)
KASP Sequence:
GGGATGGGGAGAGGCGGCGGAAGCCTTAGTCGTCACTACCGAGAAGAGAG[G/A]TAATCTACATTATTATCACACATCAACAATGGGGAAAAACAAACTCAAAC
Long Flanking Sequence:
GTCACCAAAGCTTAAAACAACAGCATTTAATTACAATAGAAATATTTTGTTTCCTTGTGAATATCTTTACTGCCACTTTGAAATTAAAGTCTATTAAAAGAATAATAAAATCTGACCTCAAGCTAAAAACACATAATTGCTTCCATTCTTGAACAGTCCATTGTAAACAGAATCCCGTTTGTTTTGCTTTTGTTCATTAGAATGTGTTTCCTCTAATCAATGTGTTGCATGTCCCTGATGGCACGCAAGGAAAAGCACATATTGTCCTGTGCTGATGTCTATGATGTCATAATTTCCCTCTCCAGCCTATCAGATCACATACCGGCTGAACTCCACCAATAGCAACACGGCCACGTTTGACGTGTTGAACTCCAGCGCACGGCAGTATACTGTCACTGGACTGAGGCCGGAATCGGTGTATGTGTTTCGTATCAGAGCGCAGACACGCAAGGGATGGGGAGAGGCGGCGGAAGCCTTAGTCGTCACTACCGAGAAGAGAG[G/A]TAATCTACATTATTATCACACATCAACAATGGGGAAAAACAAACTCAAACTGAGCTTTACATCAGTGTGTCTGGTGTGATTAAGATAAATAAATAACTTAAAGTCAGATTTTGACTTTTTATAGATCTATTTTTGCACAATTCAGCAGTGGAATCAGTGGGGGGGCATAGTAGCTGGAGGTGGATTCACCCTGCTTTGACTGAACTCTTGGAATTTCTAGTTTATATGATCCTAATGATCTGAGTGATCTGTTAGGTTTGTATTCAGTGAGCATCTCTGTAATGTATTGAGTTCCTAGACCATTTAGTGATTTATAGACAAGTAATAAGCATGAAGACGTTTCTCTAAGTCTTCACTGGAGACAAAGATCTAATTTTTGCAATGTTTTTGAGATGATAGTACGCTGATTTACTTACTGCTTTGACATGACTACTGAAACTGAAACTGAAACTCAGATCTGACTCCAGAATCACACCAAGATTCTTGACCCTATTTATTGT
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa35360
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085121 | Nonsense | 1469 | 2254 | 30 | 46 |
ENSDART00000140353 | Nonsense | 1422 | 2035 | 29 | 44 |
Genomic Location (Zv9):
Chromosome 12 (position 39052970)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 12 | 37340384 |
GRCz11 | 12 | 37515126 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGGTTTATCGCCAATCCGTTATTACACGGTTCAGGTCCGCGAGCTGCCC[G/T]AGAAGAACTGGACAGTGCATTCTGCCTCTGTCAGCCACGAGTCCAGCTCC
Long Flanking Sequence:
CATCAATATATTTAAAGATATTGAAATCTTTCTTGGTAAGGCTAGTTTCAAGATAAGGAGAAAGTCTGTTTCTTTTTATCAATAAATACTGGGGTAGACCTTTAAGATGGTTCATCAGCGTGTCAGTTAATGAGTTTCAAAAGTTGCAATTGAAATTAAGTTTTAGTTTAGTTTTTTTAATAACTTGCGTGACGTTTTGCAAAGCTAGTGAATGGTTTGTTTGAACTAAAGGAAATAGTTTCCATTAAACCAACCAATTCACTAAAGAAAAGTCCTCTGGACTTCATAACTTTATGTATGACAGGAGTGTGTTTGCTTTTTCAGTGTTTTTAAGAGTTCTTATGCTTGACCTTTGACCTCCAGCTCGGCCTCAGCCCACCAGTCGTCCCACAGTCCCTCAGGAGAATGTGCAGGCGCGCAGTGTGCTGTTGTCATGGGAACCAGGCAGCGATGGTTTATCGCCAATCCGTTATTACACGGTTCAGGTCCGCGAGCTGCCC[G/T]AGAAGAACTGGACAGTGCATTCTGCCTCTGTCAGCCACGAGTCCAGCTCCTACATTGTAGACAGGTACAAAAGACATCCACTGGAGTGTTTTAAATTAGTTGTCATTCATTCATACACTTTAAACAAAATTTTCCCAGCTTTAAATTTATCAGTTCAATCAAACTTTTCTAGTCATCTCAAGTTACATCGATCAAACTGACTTCAACTTTGTATAAATTAAAAACAAAATTGTTGAAACCTGATTAACTTACTGAAATAAGTTAAAGCAACATAAATATTTTACATTGTAGAGTAACAGTGACATTTTTCTGTTAGCTATAAGTGTTTTTTTTTTTTTTTTTTTTTTCAGGCTGAAGCCTTTCACCTCGTATCAGTTCAGAGTGAAGGCCACTAATGATATTGGAGACAGTGACTACAGTCAAGAGAGTGAAGCCATCACAACACTTCAGGATGGTCAGAACTTTTTCCTATCCTTTTTAATCTATGATTTATTATGGAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa35359
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085121 | Nonsense | 1892 | 2254 | 40 | 46 |
ENSDART00000140353 | Nonsense | 1826 | 2035 | 39 | 44 |
Genomic Location (Zv9):
Chromosome 12 (position 39034756)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 12 | 37322170 |
GRCz11 | 12 | 37496912 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CACGATATGGCTCCGCCCTCACCATCCACTGGGCCAATGGGGACCCTGGA[C/T]GAGCACCAATCACACGCTATGTTATTGAAGCCAGACCCTCAGGTGAGATT
Long Flanking Sequence:
GATCTTGCCATCAATACTCAGGTGCCAACGGCATTATTAAAACTGAGATTTCCGGCCACGTGTGAGTGTGTGTCGAGCTGCTGTTGCCTGAACTAAAAGCGGTGTGTTTGTCTAGAGTCCTCAGTGGCCTGTGTCGACTGTCTTCACTCCCCCTCCCCCCCAGGCGTCAGTAAAATCGTGACGGTGGACGTGAAGGGAAACGCGCCGCTCTGGCTGAAAATCAAAGACCTGGCGGATGGTGTCACGTACAACTTTCGCATCCGCGCCAAAACCTTCACCTACGGTCCTGAGGTGGAGGCCAACATCACCACAGGACCCGGAGAAGGTCTGTTTGGATGCTACTTCTGAGGTTTCACACCACTTCAGCTAAGCTATGTATCATTGTATCATGTAATCACTCGTTTTTATCGTTTTTAGGAGCCCCTGGGCCTCCTGGTGAGCCATTCATCTCACGATATGGCTCCGCCCTCACCATCCACTGGGCCAATGGGGACCCTGGA[C/T]GAGCACCAATCACACGCTATGTTATTGAAGCCAGACCCTCAGGTGAGATTAAAATCAAAAGGGTCCTATTATGTTCTTTTACAAATTTTTATTGTGTATGAGGAGTGTAGTAGAGCAGTGTATCTCAACCATGTTCCTGGAGGACCACCAACACTTCATGTTTTAAATGTCTCCTTTCTTTGTCACAGCCATTGCTGGTCTTTCAGGCTCTGCTAATGAGTTGAAGATCTGAATAAGTTGTGTTTGGTTAAGATGACACTCTAGTAGAACATACTCTCATGTTTGGTGGTTCAAATAACATATTATTTTTCACATAATTTATATTTGGTCTGATAAAGGTCCACCTTTCAAAAAGCTAAATGTATTGTGATTGGTTAGCTGCCTCAACAAAAAGGTTTTTTTCTGTTTCGTGGAGACTGAGCCAGAGAAAAACGACCACATTGCTTTGTCAAAGATCAAAACTTACTAGTTTTTTCATTAAATAATGTTTGTTTTGGGTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2625
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085121 | None | 2118 | 2254 | 46 | 46 |
ENSDART00000140353 | Nonsense | 2034 | 2035 | 44 | 44 |
Genomic Location (Zv9):
Chromosome 12 (position 39001852)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 12 | 37289266 |
GRCz11 | 12 | 37464008 |
KASP Assay ID:
554-2444.1 (used for ordering genotyping assays)
KASP Sequence:
WGTTCGCTCTCCATTTCTCACCCGTTCCCTTTCTTTCCACTGTAGGGCAG[C/T]GACAGTGAATATGAGGTGGACCCCAACCGYCAGAAGACCCATTCCTTTGT
Long Flanking Sequence:
TAGGATATTTGGAAAAATGCTGGATGCTGAGAACTAATGAGTTCCATAGCATTTGTTTTCCTAATATGAAAATGAATGGGTCCCAGCATCCAGCATTCTTCAAAATATCTTCTTTTATGTTCAACAGAAGAAAGAAGCTCATAAAGTATTTAAACCACATGACGGAGAGTAAACAACTTTCATGTTGGTGTGAACTATTCCTGTAATTTATTGGAAATAGAATGCCTCTGCCCAAAAAAGGGTATTGAAATAGTTCCTCAAACCACACTGACCCCAAACTTTTACATAATATTTTATATCATTTATGGTGTAACGATAACTGATGAAAACTTATGACCCAGCTGTCAAAATGACAAATGAATATCATTTCTAGAGCATTCTAGATTCTGTGGAGTGAACTCGGACACCTTCTCAAATCATCTCCTCCCTTGAATCTGAGATTACAGAAGCAGTTCGCTCTCCATTTCTCACCCGTTCCCTTTCTTTCCACTGTAGGGCAG[C/T]GACAGTGAATATGAGGTGGACCCCAACCGCCAGAAGACCCATTCCTTTGTCAACCACTACATCAGCGACCCGACCTACTACAACTCCTGGCGCCGGCAGCAGAAGGGAATCTCCAGAGCGCAGGCCTACAACTACACAGAGTCTGAGTCGGGTGAGCCCGAACACTGCGCCCCTCCTCCCCCTCTGCCTCCTCTTCCTCCTCTGCCACCGTTCCCCCCTCAGCTCAGCTCTCCTACGCCCCAGAGCCAGTCCCAAACTGGCAGCCTTTTCAGGCCCAAGGGTAGCCGGACTCCCACTCCATCCCAGCAGAGCTCCAACCCACCCAGTCAGCACGGCACACTTTATCGGCCCCCAAGCAGCTTGGCTCCAGGCTCCCGAGCCCCTATCGCCGGCTTCTCCTCATTTGTTTGATAGGATGAAGATATCGAATACACGGAAACACAAAACGAAGACAAGGGGGATCTTGTTTTCCTAAACGCCTGGTCACTCTACTGAAGAAC
Associated Phenotype:
Not determined