Busch Lab

ZMP

NDC80_DANRE

Ensembl ID:
ENSDARG00000071694
Description:
Kinetochore protein NDC80 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q6DRJ7]
Human Orthologue:
NDC80
Human Description:
NDC80 homolog, kinetochore complex component (S. cerevisiae) [Source:HGNC Symbol;Acc:16909]
Mouse Orthologue:
Ndc80
Mouse Description:
NDC80 homolog, kinetochore complex component (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:1914302

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
sa22044 Nonsense Available for shipment Available now
sa14319 Essential Splice Site Available for shipment Available now
sa16762 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa22044
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000007335 Nonsense 156 632 5 17
ENSDART00000112640 Nonsense 156 608 5 18

The following genes are also affected by this mutation:

Genomic Location (Zv9):
Chromosome 12 (position 11441918)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 10324989
GRCz11 12 10362832
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AATGCCTACTGCCAAAGTGGAGGAAGAGATCCCAAGAATGCTCAAAGATT[T/A]GGGGTAATCAATATTATTTTATCACTACACCCTGTACAATTTACAGTAGT
Long Flanking Sequence:
TTAAAAATTGCTGAAATTACATATGTAAAATATTTTTTTTAGTGCTGTTAATAAGGGGAACCAACATTTTTCTTCTAACCATAACATACATATTTGCACAAACCTGTATGGGTCAGATTTCTTGTAAATAACGCAATAATTTATATCTATAGGAGGTTTATGGGGGTTCATTGGTGGATATTTATTACCAGAACAGTTAGATATTGCTCTATTTTCAAAGAAAAAAATAGTTTAGCTCATGATTTTTAAGAAACGTTAAGCTATAATCAAAAGTCAGAAATTGAATTGCCCAAAATTAATTACAGTGAATTTATTTTCCTATTGTTTCTAGTTCCTAGTGGACAGAGGCTTTCCAGGCAGCATCACAGTGAAGGCTCTCCAGTCTCCATCCACAAAAGAGTTTTTAAAGATTTACGAATTTATCTACAATTTTTTAGAACCATCCTTTCAAATGCCTACTGCCAAAGTGGAGGAAGAGATCCCAAGAATGCTCAAAGATT[T/A]GGGGTAATCAATATTATTTTATCACTACACCCTGTACAATTTACAGTAGTTCAAATAAAACTGATCTAATGCACACATTGGCCAGAGTTAACCACTTTGTAAATATTTTTTCATAGATACCCGTTTGCACTCTCAAAAAGCTCTATGTACTCCATTGGTGCTCCTCACACATGGCCTCTGGCTCTTGGAGCTCTCATCTGGCTCATGGATGCTGTCAAGGTAACTCTTCTTCAAACATTTATAAACTATATTAACTGAACTATTGCTGGTTTCCACATCATGTTGTAGCATAAAGAAGACCTCTTATTTTAACCAGAAATGGGCATTGTCACTTTACCTATAGCTCAGTGGTAGGGAACCTATGGCTCGTGTGCCACATGTGGCTGTTTGGCCAAAAATATGTGGCTCTCCAGCTGTCTCCTTTCAATAATATTTTACAGTTTACTAGAAATAAGTTTCCTGTTGGAAACACAATTACAATAGCCTTTTCATTGTCATTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14319
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000007335 Essential Splice Site 513 632 14 17
ENSDART00000112640 Essential Splice Site 489 608 15 18
Genomic Location (Zv9):
Chromosome 12 (position 11433812)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 10316883
GRCz11 12 10354726
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
YAAGGAACAGATTCGCAAAGTCGACCAGCAGCTGGAGAATGCCATGCAGG[T/C]AAAATACACCTCCACRGGGCGTTTGGGTTTTAAATGTAATATTAAAAAAA
Long Flanking Sequence:
GTTTTATTTACACCGTAAACTTTATCTGGCAGTTTATTCATTAAACATTTTTATTGCCATTTATATAACATTTTTACCTTCTGTGTGGGTTTTATATTAGCACACTTATAACCAAAATATAGGCAGATAAATAGAAGTCGATTTTATAATTTAATGTTTTATATTGAGCCGATAACAAAAGCTTTACGAATAAGCAGTTGTCATCTGCTGATACTGAAATTGGCGCTATGTTGTGAATCACTTAATAAAAGGCGTCTTGATCATACAATTGTTTTATTTACCGCTTTTGCAGTTAGTCCCAGCCTGTTTAATTAGGTAAATTTAAGATTCAGGTAGGCTGTGCACTAGATTTTGCATGTACCTATAAAGGTGAGCTCATCTATGTACAACTGCATCTGTCTATTAGGTGAAGTCCAACATCTTTGATAAGGAGAACGACATTAAGCAGCTTAAGGAACAGATTCGCAAAGTCGACCAGCAGCTGGAGAATGCCATGCAGG[T/C]AAAATACACCTCCACGGGGCGTTTGGGTTTTAAATGTAATATTAAAAAAATATGCTTGGATAATAAATAGTGCATGGAAATTGAAGTCATTCAGGTAACACTTTATTTTGATGGTCCATTTGAGTATTAGTAGACTGTCTGCTTAATATCTGTTAATACTGCTCCTTCAACAGACATTTAACTGACTATAAGAAACTTTGCTTGTACATATTAACTTACACTAACCCAAAACCCAACCTAACTGTCTACTTATAATTTAGTGAGAATTAGCTGCAATGTAACTTAAATTCAACAAATGGACCATTAAAATAAAGTGTGACCATCCTTCATTTTCAGAAACGATACATATTAAATAGTTGTTTTGTGCATGCGATTGATCTTATTCTGCTGTTTGTAGGAAATGGCGCTGGAGGATGACAAGTGGGCAGCTGAATTGGACTCTGCCGAAACTCATAAGAAGCTTTTTGAAAAGAATGTAATGCAGGGGATTGAGGAAGCTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16762
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000007335 Nonsense 632 632 17 17
ENSDART00000112640 Nonsense 608 608 18 18
Genomic Location (Zv9):
Chromosome 12 (position 11432576)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 10315647
GRCz11 12 10353490
KASP Assay ID:
2260-5040.1 (used for ordering genotyping assays)
KASP Sequence:
TAACCAGCTCACAGATCTGGWGGAAAACTTCATWAAGAAAGCCAACAGCT[T/A]GTAATGCTTRACTKTCCTGTTTTGTAAATACTKTTAYTATTAGACKAATT
Long Flanking Sequence:
TTACCTTGACTTGACATGTGCTGCAGAGTTTGCAAAAAGTCTTTTAAAAAGTGTAAGATTTCAAAACCATTTTAGGCCTTAGTCTTAAAAGTGGCATAGAGTGCATTGACAACAAAGATTACAAAACAAGATAATTTGAAGAATGTTGTCATTGACGTCTACGGTAGCTGTTTTTTTCAACATTTCTTTTCAGTCTTCTTTTGTGTTCAACATAAACTCAAACTGGTTTGAAACGAGTAAAATTTGAATAAATGTGTCTTTAAATTACACTCCATCCATTACACATGACCCTATTCTTTACCATTACCGAGTATTTTACTTGTCTACTTGATAAGTCAATTATCATCCTTTTAACCAAAATGTTTTGTTTGTCTTCTAGAAACACTGTGATGAGCAGTTGAAAAGGTTTGACAAGCTGAAGGATATCGTCCGTGAGGATGAGGCTGACATTAACCAGCTCACAGATCTGGTGGAAAACTTCATTAAGAAAGCCAACAGCT[T/A]GTAATGCTTAACTGTCCTGTTTTGTAAATACTTTTACTATTAGACTAATTTACTGATTCTAGCACCACAGAAACGTCTTTAAATACAGAATCAAATGTTTTGTATTTATCCTGTATTTACATCATTTTAATAAATGTGTTTTCATTTCTAAATGTGACGTCTATTGTTCATGTTTGATTTCATTGTTTACAGATTCTTAAGGTATATTATTTTCATATTCAGTATATTGGTTTTGTTCGATTTAATTAGTCTGTAAATAAAACCTTCTTTTGACTCGTAAATTTGCCTGTTTTAATATTATTTGTGAAATTTAGACCTGGTGTTAGCACTACATTCTTTGATAATTTAACCTATTGACTAGAAAGAATAACAAGGTTTAATAAAAAATGCAAATAAACGGCTGCTTTCTAAAGATATCTGGAGTAATTATGTTTTAGTTAGATCCAAGTAGCGTTTTTCTCATGACATGCCTTTTTTCTGGGAAAAATACGAAAATCAAT
Associated Phenotype:
Not determined