ZMP
opn1sw2
Ensembl ID:
ZFIN ID:
Description:
Opsin-1, short-wave-sensitive 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9W6A8]
Human Orthologue:
RHO
Human Description:
rhodopsin [Source:HGNC Symbol;Acc:10012]
Mouse Orthologue:
Rho
Mouse Description:
rhodopsin Gene [Source:MGI Symbol;Acc:MGI:97914]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa38844 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa41842 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa38844
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000011178 | Nonsense | 20 | 354 | 1 | 5 |
Genomic Location (Zv9):
Chromosome 11 (position 26406507)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 11 | 25235332 |
| GRCz11 | 11 | 25472948 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACAACAGCAAACGCCAGAACTGTTCGAAGACTTCCACATGCCCATCACTT[T/A]AGACGTCAGCAACATCTCAGCTTACAGCCCTTTCCTGGTCCCACAGGACC
Long Flanking Sequence:
TTAGCTGCTTTATCTGCATTGGCCGGCAGATTAAATGCCATCGCTAACACAGAACCACACTGAAGGGTGAAAGGGATCATCCGAATTAGTCAGGTTTTGGTGTTGGAAATGAGATTAGGTGAATTGTGTCTTGTACTGCGCAGATGTAGTTTTGTAGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGCTCAGGAAACTTTGTGTGTAGCTGATGACAACAAACCTCAAATCCTACACTTAAGACCATTTGGGAGGAGCAAAATGATATCTTTTGGATCTCTATATAAGAGGGATTGCATGCCAATAATTTGAGGGAGTCTTCATCTGGTGACCAGTGAAGAGAGATTTGACATCAATCAAGGAATGCTGCAGTAATCTGCAGAAGAAATCAAACCATTTATTACAGCATTTCTCAGTGGAGTGGGCACCAATTACAAGCAAGATGAAGCAACAACAGCAAACGCCAGAACTGTTCGAAGACTTCCACATGCCCATCACTT[T/A]AGACGTCAGCAACATCTCAGCTTACAGCCCTTTCCTGGTCCCACAGGACCACCTGGGACACAGTGGCGTATTCATGGGCATGTCCGCTTTTATGCTCTTCCTTTTTATCGCAGGAACTGCCATCAACGTTCTTACCATAGTTTGCACAATTCAATACAAGAAACTCAGATCTCACCTGAACTATATTCTTGTGAACCTTGCCATTTCCAACTTGTGGGTGTCCGTTTTCGGTTCCTCGGTAGCGTTCTACGCCTTTTACAAAAAGTACTTTGTCTTTGGGCCGATAGGATGCAAAATCGAGGGCTTCACTTCAACAATTGGAGGTACATTGTAACATGCGTCCACATTGTTTTAATGCTAGCCACATGTAGATCTTACATTCTGCTACTGGACTGTGATGGTTTCAACAATCTTCTTTCTGTGTTTTTGCAGGAATGGTGAGTTTGTGGTCTCTTGCTGTGGTGGCGCTGGAAAGGTGGCTGGTCATTTGCAAACCCCTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa41842
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000011178 | Nonsense | 199 | 354 | 3 | 5 |
Genomic Location (Zv9):
Chromosome 11 (position 26407452)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 11 | 25236277 |
| GRCz11 | 11 | 25473893 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TACAGGTATATACCTGAGGGCTTGCAGTGCTCTTGTGGACCTGACTGGTA[T/A]ACGACTAACAACAAATTCAACAATGAATCCTACGTCATGTTCCTCTTCTG
Long Flanking Sequence:
TGTGGTCTCTTGCTGTGGTGGCGCTGGAAAGGTGGCTGGTCATTTGCAAACCCCTCGGGAACTTTACCTTCAAGACCCCTCATGCCATTGCCGGCTGCATACTTCCTTGGTGTATGGCATTGGCTGCTGGACTCCCTCCACTCTTAGGCTGGAGCCGGTAAGTCCCTTGGTTACATTTTACTTTGATGGTCCCTTCAGGCCTTCTGTTGACTTTGCAACTAGTATTACACAGCAAGTGTCCATGTGACCGTGTTCCTCATAGTCACTAAAATGTCTGTTGGCAGACGATCAGAATCAATTGTTTGCAGATTTAAAGCAGACACTAATGGTTGTTATATTCAACAGAATGTCTAAAGTGGAACTTCAACTTAATGTGTTGCCACTGCCTGTAATACACTGACAATGCAACAGCTTTTTGTTTTGCTAAATGGTGATGACTGAAATCTGTTTTACAGGTATATACCTGAGGGCTTGCAGTGCTCTTGTGGACCTGACTGGTA[T/A]ACGACTAACAACAAATTCAACAATGAATCCTACGTCATGTTCCTCTTCTGCTTTTGCTTTGCGGTTCCTTTCAGCACCATTGTATTCTGTTATGGTCAGCTGCTCATCACTCTCAAATTAGTAAGTACAATTTTCACTTCGAAATTTTTATTTTCCAAACTGCAATTATTCTTAAACAACCTTAATATATGGAACTATACATTTTACACATTACAATAAGGTCGTATCAGTTAATGTGAGTCAATGTATTCTCTAACATGAACAAACAACAAGCAATACATTTATTAGCCTACAGTATTTATTCATCTTTGTTAATGTTAAATGATAGTACAAAAAAGGTGTTTGTTGCTAGTTTAGGTTAACTCATTAAATTAACTAATGTTAAACATTCATTTGAATTTTAATATTGTATTTGTAAATGCTAAACTATGATTAATAAATGCTGTACTAGCATTATTCCTACTCATTTCATGTTTAGTAAATGCACTAACATTAACTAA
Associated Phenotype:
Not determined