ZMP
sema6a
Ensembl ID:
ZFIN ID:
Description:
semaphorin-6A [Source:RefSeq peptide;Acc:NP_956286]
Human Orthologue:
SEMA6A
Human Description:
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:HGNC Symbol;
Mouse Orthologue:
Sema6a
Mouse Description:
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A Gene [Source:MGI Sym
Alleles
There are 6 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa21165 | Nonsense | Available for shipment | Available now |
| sa34267 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa41095 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa21166 | Nonsense | Available for shipment | Available now |
| sa16622 | Essential Splice Site | Available for shipment | Available now |
| sa38661 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa21165
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000063167 | Nonsense | 4 | 967 | 1 | 21 |
Genomic Location (Zv9):
Chromosome 8 (position 241150)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | KN149932.1 | 63130 |
| GRCz11 | KN149932.1 | 63130 |
KASP Assay ID:
2259-9905.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGCAGGCTGAAGTTAAGAAGAGATCGTGCGGGACAGTAAAGATGCGAGCG[C/T]AGGCCCTGCTGCTGTACCTGACGCTGCTGCAGACGGCTGGAGCCGCTTTC
Long Flanking Sequence:
GAGCATTCCCTCATTGGCGGTTTTCTACCTGAGCGTTCTCTTATTGCCCATTGGTCTCCAGAGCGTCCTCTGATTGGCTGTTTTCCCCCTGAGAGTGCTCTGATTGGCTGTTTTCCTCCTGAGAGTGCTCTGATTTGCTGTTTCCTCTTGAACATTCCCTCATTGTCTGTTTTCTCCCTGAACATTCTCTTACTGCCTGTTTAACTCCAGAGCGTCCTCTGATTGGCTGTTTTGCCCCTGAGAGTGCTCTGATTGGCCGTTTTTTCCTGAGCATTCTCTAATAGGCCGCTTTCCCCCTGAACGTTTCCTGATTAGCTGTTTCTCACCTGAGTATTCTCTGATTGCCCGTTTATCTCCTGAACATCCTCTGATTGGCTGTTTTCCCCCTCTGAGAGTCTCTGATTGGCTGTTTTCCCTCTGAGCATTTTCTGATTGGCTGTCTGATCCTCCTGCAGGCTGAAGTTAAGAAGAGATCGTGCGGGACAGTAAAGATGCGAGCG[C/T]AGGCCCTGCTGCTGTACCTGACGCTGCTGCAGACGGCTGGAGCCGCTTTCCCAGAAGACACCGAGCCCATCAGCATCGCACATGGAAACTGTGAGTCTGCAAAAACATGTTACTTACCTAGAGTTTTAGTCTTGTTTCTAGTCCAAATATCTCCAAATTCAAGAAGCAGTTTTCTAGACAAGCACAATATATGGCCTTTTAGAAACAATGAGTCAAAATGAAGTGAGTGTTTTAACTTGGACATCAGATTATTCGGCTTGTTTTAAGGAGAAACCCACTGATTATTTCTGAAAACAACACTGTATGACAACACTTGTCTAGAAAATGCTCCTGGATTTAAGAATTTTTAAACATATAGACAAGAAACAAGCGTCTGCATCTCTCAGAGCTCTGTAATTATTGCACCAGTGTGAATTAATCTGTGCTGTTCATCATCTTCCCCATCAGACACTAAACAGTACCCAGTGTTCGTGGGACACAAACCAGGCAGGAATAACACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34267
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000063167 | Nonsense | 9 | 967 | 1 | 21 |
Genomic Location (Zv9):
Chromosome 8 (position 241167)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | KN149932.1 | 63147 |
| GRCz11 | KN149932.1 | 63147 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGAGATCGTGCGGGACAGTAAAGATGCGAGCGCAGGCCCTGCTGCTGTA[C/A]CTGACGCTGCTGCAGACGGCTGGAGCCGCTTTCCCAGAAGACACCGAGCC
Long Flanking Sequence:
CGGTTTTCTACCTGAGCGTTCTCTTATTGCCCATTGGTCTCCAGAGCGTCCTCTGATTGGCTGTTTTCCCCCTGAGAGTGCTCTGATTGGCTGTTTTCCTCCTGAGAGTGCTCTGATTTGCTGTTTCCTCTTGAACATTCCCTCATTGTCTGTTTTCTCCCTGAACATTCTCTTACTGCCTGTTTAACTCCAGAGCGTCCTCTGATTGGCTGTTTTGCCCCTGAGAGTGCTCTGATTGGCCGTTTTTTCCTGAGCATTCTCTAATAGGCCGCTTTCCCCCTGAACGTTTCCTGATTAGCTGTTTCTCACCTGAGTATTCTCTGATTGCCCGTTTATCTCCTGAACATCCTCTGATTGGCTGTTTTCCCCCTCTGAGAGTCTCTGATTGGCTGTTTTCCCTCTGAGCATTTTCTGATTGGCTGTCTGATCCTCCTGCAGGCTGAAGTTAAGAAGAGATCGTGCGGGACAGTAAAGATGCGAGCGCAGGCCCTGCTGCTGTA[C/A]CTGACGCTGCTGCAGACGGCTGGAGCCGCTTTCCCAGAAGACACCGAGCCCATCAGCATCGCACATGGAAACTGTGAGTCTGCAAAAACATGTTACTTACCTAGAGTTTTAGTCTTGTTTCTAGTCCAAATATCTCCAAATTCAAGAAGCAGTTTTCTAGACAAGCACAATATATGGCCTTTTAGAAACAATGAGTCAAAATGAAGTGAGTGTTTTAACTTGGACATCAGATTATTCGGCTTGTTTTAAGGAGAAACCCACTGATTATTTCTGAAAACAACACTGTATGACAACACTTGTCTAGAAAATGCTCCTGGATTTAAGAATTTTTAAACATATAGACAAGAAACAAGCGTCTGCATCTCTCAGAGCTCTGTAATTATTGCACCAGTGTGAATTAATCTGTGCTGTTCATCATCTTCCCCATCAGACACTAAACAGTACCCAGTGTTCGTGGGACACAAACCAGGCAGGAATAACACACAGCGACACAAACTGGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa41095
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000063167 | Essential Splice Site | 72 | 967 | 3 | 21 |
Genomic Location (Zv9):
Chromosome 8 (position 241715)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | KN149932.1 | 63695 |
| GRCz11 | KN149932.1 | 63695 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGACACCAGCTGATCGTCATCATGAACCGGACGCTGTATGTGGCTGCGAG[G/A]TGAGTCTGATCTTCATCATCACTCCTGATCTGAGAACGCAGACAGAGCAG
Long Flanking Sequence:
GCCCATCAGCATCGCACATGGAAACTGTGAGTCTGCAAAAACATGTTACTTACCTAGAGTTTTAGTCTTGTTTCTAGTCCAAATATCTCCAAATTCAAGAAGCAGTTTTCTAGACAAGCACAATATATGGCCTTTTAGAAACAATGAGTCAAAATGAAGTGAGTGTTTTAACTTGGACATCAGATTATTCGGCTTGTTTTAAGGAGAAACCCACTGATTATTTCTGAAAACAACACTGTATGACAACACTTGTCTAGAAAATGCTCCTGGATTTAAGAATTTTTAAACATATAGACAAGAAACAAGCGTCTGCATCTCTCAGAGCTCTGTAATTATTGCACCAGTGTGAATTAATCTGTGCTGTTCATCATCTTCCCCATCAGACACTAAACAGTACCCAGTGTTCGTGGGACACAAACCAGGCAGGAATAACACACAGCGACACAAACTGGACACCAGCTGATCGTCATCATGAACCGGACGCTGTATGTGGCTGCGAG[G/A]TGAGTCTGATCTTCATCATCACTCCTGATCTGAGAACGCAGACAGAGCAGACTGCTGACATTATGAAGAGCAGGCAGATCCAGCGCGCGCACACACACACTCACACACACGCCTCTTATATGATTATATTGTACACACGTGTGTGATTTACCCAGAGCTGAAGACACTCCCCTTCACTGATTGATTGACCTGGACTCCGCCCACTCACTCTCACTAATGAAAACACCGGAGCTCAGACTGATTGATAGCTGTAGGCTCCGCCCACTTATCTTCCACCAATGAGAGCTCTGCGCAGCTGTGGCTCAGTGACCGGCTGATGGGTTTTGGAGTAATAGGAGTAAATCCTCCAAAAATCTGAGAGCAGATCCAGAGTTCTGGACGTGACTTTTACAGTAAAAACTGAACATAAAGTCACAGAGAGAGTAGATGTTCACATTATATTGAAACTATTGTGTATGTTTTCCAGAACAGCTGACCACAGAGTTATGAGATCAGAGAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21166
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000063167 | Nonsense | 227 | 967 | 9 | 21 |
Genomic Location (Zv9):
Chromosome 8 (position 262949)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | KN149932.1 | 84929 |
| GRCz11 | KN149932.1 | 84929 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCCTGCTCCTCCTGCTTGCAGAGCCGTATTTCGTGCAGGCGGTGGATTA[C/A]GAGGACTTCATCTACTTCTTCTTTCGGGAAATCGCCATGGAGTACAACAG
Long Flanking Sequence:
CCACACACACACTCACTCACACACACACACACCCACACACACACTCACTCACACACACACTTCGCCATATTTCACTACTAAACTCATTACAGTACTCGTTTCTTCAATAAAACAAACATTGTTTTAATAAACCCTTCTGGGATGTAATGCTTAAATATGCAAATGAGGCATTATCTAATGAACTAATTTGCATATATCTCCATAACATATTAACATATTCTGCAACAGATATTCTCCTGAAAGCATCCATCCAAAAACTGAAGAGGTTATGTTGTTGCTTATTATTTACACACACACACACACACACACACACACACACGCACACACACACACACACTTTACATCACAGTTAGGCCAGACTAATCTGTGCATTAGAGTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCATGTCTCTCATGTCTGCTTGACTCTCGTGTCTCCTGCTCCTCCTGCTTGCAGAGCCGTATTTCGTGCAGGCGGTGGATTA[C/A]GAGGACTTCATCTACTTCTTCTTTCGGGAAATCGCCATGGAGTACAACAGCATGGGGAAGGTAGGAGAGCTCTGGGAAAACATCCGTGCTTTCAGACAGGGAAGTGCACAGGAAGCGGGCGTGTGGAGTGTGTGAGCGGGTTTAAAGGGTCTGGGCGCGGGCCGTCAGGACGCAGCTGCTAAAAATAAAGCAAACATTGTCTGCCGTCTCAAAGAAAAGCCCTGAATAGCCTGAAGCCCATCACCGCCTTCCTGAGATTAGGATCCGCAGACGGACAGCAGCGCAGTGCGCAGGGTTCAGCAGGATGATGGCGGAGCTGTGATTGGACGAGCAGTAATTACAGTGCATATGAGTGTGGGGTTACTGTACCTGCCTGATTACTGTAATTACAGCAGCGCTGCGACCCTCTTCCTGACGCAGAGCAGCTCTCACATTACAGCAGAGTGTGTGTCACATCTACAGGCACACAGGGAGATCAGCACCGGTAATAAAGGACGTAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16622
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000063167 | Essential Splice Site | 547 | 967 | 15 | 21 |
Genomic Location (Zv9):
Chromosome 8 (position 271989)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | KN150518.1 | 36047 |
| GRCz11 | KN150518.1 | 36047 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGCGGCTGGGTGTCCGAGGGCGCCTGCAGAGAAATCACATCTGATGCAAA[G/T]TAAGTGCCTCRCTCTCAGGCCTGTAATTATAGATCASAGCCGCCAGCGCT
Long Flanking Sequence:
GAGTGTCAGTGTGTCAGTCTTCAGGATATCTATAATCCAGTGTGTCCAGCACTGACAGAGTTCACCTGTCGCAGGAAAATATGAGTCTAAGAAAAAAACTCCTCAGTGTTTAGCCCAGTATACGTCTAAAAATACATAATAAAGATCTTTTCAAAAGTCTTAAATGTGACCTGCAGAAAGCCTGGTGTGAAAGCGCCGTGCTCCCCCTCCTCCAGCAGTCTCCGCTTCAGATGTTAGGTCCACGTTTGGTGCACACCTGAACACAAGCTGCTGTCACACCTGAACAAACCAACCACACCAAACAGACAACATTAGATTTAACCGAAAGCACCCTAAATCTTCCCCTCGCTAGTGTCCACACTAACCCTCCTCAGTTCAATTGCTCTGTGTCTCTATAACAGTGTCCCGTGTGTCTCTGTCAGGTCCTGTATCGCCTCCAGAGACCCGTACTGCGGCTGGGTGTCCGAGGGCGCCTGCAGAGAAATCACATCTGATGCAAA[G/T]TAAGTGCCTCACTCTCAGGCCTGTAATTATAGATCACAGCCGCCAGCGCTGATGTCACTCTACCCAGAGGCATGATGGGATTGTGGTTTGAGCCGCTGGAGCTTCTCATCTGGAAAAAAAGAGTGTTTGACCCCAGAATGCCTCTGTAATTCATCTCTTTATTTATATCACGTATTAAATGAGCAGCATGTGGCGTTTGTGAACGCCTGCGTCATCATGTGATCATCATGGCTGCGTCTGATCTGTACAGCTCATATACACTACATTACTGCTCATATACACTGCATTACTGCTCACATACACTGCATTACAGCTCATATACACTGCATTACTGCTCATATACACTGCATTACAGCTCATATACACTGCATTACAGCTCATATACACTACATTACTGCTCACACACACTGCATTACTGCTCACACACACTGCATTACAGCTCATATACACTGCATTACTGCTCATATACACTGCATTACTGCTCATACACACTGCATTAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa38661
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000063167 | Nonsense | 752 | 967 | 21 | 21 |
Genomic Location (Zv9):
Chromosome 8 (position 289795)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | KN150518.1 | 18241 |
| GRCz11 | KN150518.1 | 18241 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CACCCGAGTCCACACCACTGCAGCCACGCCGCAAGCCTAGCAGGGGGAGC[C/T]GAGAGTGGGAGCGCAACCAGAACCTGATCAACGCCTGCACCAAAGAGCTG
Long Flanking Sequence:
AACAGCCCCTGACTCAGGAATGGAGTAGACTGTCAGGATGCACAGATGAATGTTGGTGTTATAGTCATTAATGAGGGTTTACTCTGTCTGCAGGAGTGATCCGCGAGACCTTCCACCGGGACCGGGATCAGATGGTTCCAGTGACGCTGTTGGCCATCGCTGTGATCCTGGCCTTCAGCATGGGCGCCATCTTCAGCGGGATCCTGGTGTACTGTGTGTGTGACCACCACCGCCGGCGGGAGTTCCCCATGTCAGGACGCAAAGAGAAGGACTGTGCGGCGTCCCGCCGCGGCTCCATGAACAGTGTGACCAAGCTGACGGGGCTGTTCGAGACGCAGGCTAAAGACGGGCGTGCAGAGCAGATGCTGACCCCGCTGATGAACGGCCGGCTGGTCAACGGGCGGATGCTGATTAAAGCGGAGCAGCACCTGGACCTGTCCGCCCTGCCCACACCCGAGTCCACACCACTGCAGCCACGCCGCAAGCCTAGCAGGGGGAGC[C/T]GAGAGTGGGAGCGCAACCAGAACCTGATCAACGCCTGCACCAAAGAGCTGTCATCAATGGGGTCACCTGTGATCCCGACAGAGCTGCCGCTTCGGGCATCCCCGGGCCACATCTCCAGTGTGGTGGTGCTGCCACTGCCACCACATCAGTCGTACCAGCACGAGTACGTGGAGCATCCGCAGCAGCGCCCTGACGATCCAGCGGCCACGCTGGAGTTCCAGACGCTGCGGAGTCCGTGCCGTGGTGCAGAGGAGGAGGTGGTGCCGCCACGAGTGCCCCAGCGGGAGGCGTCCCTGGTGCCACCGGCCGTCCCACAGATGGGCAAACGGCTAGACATGCACTCCTCCATGTACGCCCGCGGGTTCCCCATGAGCTCCGGCCTGAAGAAGCAGCACAACACCAACTCCTCCAACTCCTCACACATGTCCAGGAACCACAGCTTCCGTGTGGAGACGCCTCCGCCCGCCCCGCAGCGCGTGGACTCCATGCAGGTCTCCTCT
Associated Phenotype:
Not determined