ZMP

zgc:172271

Ensembl ID:

ENSDARG00000013240

ZFIN ID:

ZDB-GENE-080204-110

Description:

hypothetical protein LOC100000381 [Source:RefSeq peptide;Acc:NP_001107938]

Human Orthologues:

LTF, TF

Human Descriptions:

lactotransferrin [Source:HGNC Symbol;Acc:6720]
transferrin [Source:HGNC Symbol;Acc:11740]

Mouse Orthologues:

1300017J02Rik, Ltf, RP24-421P3.2, Trf

Mouse Descriptions:

RIKEN cDNA 1300017J02 gene Gene [Source:MGI Symbol;Acc:MGI:1919025]
lactotransferrin Gene [Source:MGI Symbol;Acc:MGI:96837]
signal recognition particle receptor subunit beta [Source:RefSeq peptide;Acc:NP_033301]
transferrin Gene [Source:MGI Symbol;Acc:MGI:98821]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa38574	Nonsense	Mutation detected in F1 DNA	Not yet available
sa14356	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa38574

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000021969	Nonsense	27	733	2	18

Genomic Location (Zv9):

Chromosome 6 (position 40828981)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	6	40900581
GRCz11	6	40898117

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TTCTGCAAGCATCTGCCTGTGTATCTACATCCAGGTAAGAAGATGCGCTG[G/A]TGTGCAGTATCAGAGGCAGAGCAGAAGAAGTGTGCAGAACTGGCCAAAGC

Long Flanking Sequence:

AAGTATAAAATGCAAACTGATGTATTTTTGATGGGTTTTCATTATTATTATTATTTCCGATGTTTTGAATCCATTTGTATTATGATCTTTTTGTTTTAATTGGTGCATTCTGCGTATTTGATATTTCTAATTAATTTTAGTGAATCTTTTAATGTATTTGTGGATTGCAATTTATTTATTGATTGTACAATTTCAAATTAACTAACTATTTGTATTTTTTTCATTTAGTTTAGATTTGTCTATTTTATTTATTGGGAGACTAATTATTCTCCCATAGAAACCCTGATAAAATGTAGCTTCACTGCAATGTAAGTCACCTTACATTTAAAACAGTTAAAAAACCTCTGCCAGATGCATGAATGTAATGCAATTTTTAGGTATGGTTGGGGAAAGAAAGCCACCATTAAGCCCCATGAAACCTTAAAAACATTTAATTTGTGAAAACCACTTTTCTGCAAGCATCTGCCTGTGTATCTACATCCAGGTAAGAAGATGCGCTG[G/A]TGTGCAGTATCAGAGGCAGAGCAGAAGAAGTGTGCAGAACTGGCCAAAGCTCTTGTCGCTGTCCTTCCACCTGCAGCAGTCACTGCGTTCGCTCGTCTGTCATGTGTGAAAGCTTACAGCACCGCAGACTGCATTAATAAGATAAGGGTGGGTTACGTGACACTGATTACACTAAAAAACAAATCTGTTAACACAAATGAACCTCTGCAGTATAAATATTTGAATGCTTGTTCAAACGACTTATTTCTTGAAGTTTATTTGGGGAATAACCTATTTATTTTTTTATGTTCAATCCACTTAAATTTGAAAAAACAATTTAGTTAACTTAATCGATTTGTGTTGGGACAATCTAAAGGAATTTTGTGGAACCCAGCATTTTTCACAGTGTTCTATTTCCCTTCTCATCAGGATAATAAAGCTGACCTGGTGACTCTGGACGCCGGAGAGGTTTATTCTGCTGTCAAACAGTTTGGGCTCACAGTAGTTGCAAAGGAAATCTA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa14356

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000021969	Essential Splice Site	596	733	14	18

Genomic Location (Zv9):

Chromosome 6 (position 40818229)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	6	40889829
GRCz11	6	40887365

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GGAGAWGTGGCCTTTATGGAGCACCACAATCTAGAAAGCAACATTGAACG[T/C]AGGATATAATMTCTCTSTCTTTCTTTTTTTGGTAGGTTTAAATATGTTCA

Long Flanking Sequence:

GTTTTGGAAAGGCTGTTTGCCTGGGGGTCAGGGTAATCTGTGTAAGGTGTGTATGGGTGGAACTGAGGAAGCTGCCACGAAACGTTGTGCTGACAACCATAATGAGCGCTACTACGGCAACATGGGTGCATTAAGGTGAGGATTTGAACTCGATGAAGATCAAATAAAACATTGTACTACATATACTTGACTGTTTTTATTTCATTACGAAGGAACAGTGCACATCTAACAACCTTTCTCAAGAAAGTTAATGTACCCAAATTAGCCCAAAGCTAGTTTTCACTGAGACTCCCTTTGCCAGAAGTTATAGGCCTAAAAATGTTAATTGTAGCAATATATAGGATTATTTTTTATTGGTAGTGCCACATTGCTTAAACCAAACCGCTCTTCAGGGCTTATATTGTCTTTCACTCCAGGTGCCTGGTTGGAGACCCAACTGGGAAAAGTTTTGGAGATGTGGCCTTTATGGAGCACCACAATCTAGAAAGCAACATTGAACG[T/C]AGGATATAATCTCTCTCTCTTTCTTTTTTTGGTAGGTTTAAATATGTTCAGAGAAAACGTTTTAAATTTTAACTCCTTCAATTTTATTATTTAATTGGCAGTTTTCTTTAATTCTTTTAAAATCAAGAATTCATCTTGAGTTTTCATTATTCCAAACCTTTGATCTTCCGTGTTTTGACCCCCCCCCCCCCCCCCCCGCCCCCCGTATACATATTCTTCTCTTTTTTTCTATTTTTAAGTACTTTTTATTTAGATAATGTATTGATGGGGGATGCAGTGGCGCAGTAGGTAGTGCTGTTGCCTCACAGCAAGAAGGTCGCTGGTTTGAACCTCGGCTCAGTTGGCGTTTCTGTGTGGAGTTTGCATGTTCTCCCTGCATTCGAGTGGGTTTTTTCCGGGTGCTCGGTTTCCCCCACAGTCCAAAGACATGCGGTACAGGTGAATTGGGTAGGCTAAATTGTCCGTAGTGTATAAGTGTGTGTGTGAATGTGTGTGTGGAT

Associated Phenotype:

Not determined