ZMP
specc1
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate spectrin domain with coiled-coils 1 (SPECC1) [Source:UniProtKB/T
Human Orthologue:
SPECC1
Human Description:
sperm antigen with calponin homology and coiled-coil domains 1 [Source:HGNC Symbol;Acc:30615]
Mouse Orthologue:
Specc1
Mouse Description:
sperm antigen with calponin homology and coiled-coil domains 1 Gene [Source:MGI Symbol;Acc:MGI:24423
Alleles
There are 6 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa13380 | Nonsense | Available for shipment | Available now |
sa13468 | Nonsense | Available for shipment | Available now |
sa1298 | Nonsense | Available for shipment | Available now |
sa20566 | Essential Splice Site | Available for shipment | Available now |
sa38521 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa13380
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000047143 | Nonsense | 556 | 1011 | 3 | 14 |
ENSDART00000137052 | Nonsense | 556 | 1035 | 3 | 14 |
ENSDART00000047143 | Nonsense | 556 | 1011 | 3 | 14 |
ENSDART00000137052 | Nonsense | 556 | 1035 | 3 | 14 |
Genomic Location (Zv9):
Chromosome 5 (position 65949950)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 62204858 |
GRCz11 | 5 | 62889584 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTAGTGACAACACTGAGCTGCAAAGTCTGCTCAAAGTGGCGCATGAAGAT[C/T]GAGACAAGCTGGAGATGACCTGCACAGAGCTACGACAAGAGCTGCAGCAG
Long Flanking Sequence:
CCCTACAGCAGCAAAGGGAGCGCGTAGAACTCTTGGCGCAACAAAACGAGACTCTTCTCCAGAGGCTCAGAGAACAAGCTCAGAGTCAAGAAGCTGAGGCTTCACGTGCCTCTCGGATGGCAGAACTCGAACAGCGTTTGGCTGAGCAAGTAGAGAGTTCGCGATTTGAAAGAGAGAAGCTGGTAGACATCCAGCAGCAGCTGACAGGGAGTCTCAGAGCCTTGGAGAAGGAGAATCAGGAGGCGCAAACTGCTGTGAAGAGCTTAAGGGAAGAAGAAGGGCTTCTGCAAGGGCATCTGGAGAGTGAGAAGCTTGCTAGAGATGAGGCAGTGAGGAAAACTGAGGAACAGAGGCTAGCCATGGAGGCTCTGAGGGTGGACAATGCGAGTATGAAGGCGCAGGTGGAGGTGGAGCGGCAGAAGGTTGCTGAGCTGAAGGCAGTGCAGAGCGCTAGTGACAACACTGAGCTGCAAAGTCTGCTCAAAGTGGCGCATGAAGAT[C/T]GAGACAAGCTGGAGATGACCTGCACAGAGCTACGACAAGAGCTGCAGCAGGTATGCAGTGAAGTAGAAGTTAACAAGGGATAGAACAGGGATGGGCAAACTTGACCCTTGAGGGCTGGTGTTCCTTCAAAGTTTTGCTATAATACATTAATCAGACACACCTAATCAAACGAATTAGTGTTTTCTTTAGTGTCTTGATTAGGGTTGGACCAAAACTATGCAGGACACCAGCCCTCCAGGATCAAGTTTGCATATGCCTGGTATATAACCAGACTGGTAATTTCTAACATAAAGAAGAAGCTACCCAATTTACGATGATCCTAAAATACCCAAAATAATGGGCAGGTTTTTTTTTTTTTGCTAATGCTTTTATGCCAGGGGTCACCAATCTTGGTCCTGGAGGTCCGGTACCCTGCAGGGTTTAGCTCCAACTTGCCTCAACACGCCTGCCTGGGTGTTTCAAGTATACCTAGTAAGAACTTGATTAGCTTGTTCAGGTGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13468
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000047143 | Nonsense | 556 | 1011 | 3 | 14 |
ENSDART00000137052 | Nonsense | 556 | 1035 | 3 | 14 |
ENSDART00000047143 | Nonsense | 556 | 1011 | 3 | 14 |
ENSDART00000137052 | Nonsense | 556 | 1035 | 3 | 14 |
Genomic Location (Zv9):
Chromosome 5 (position 65949950)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 62204858 |
GRCz11 | 5 | 62889584 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTAGTGACAACACTGAGCTGCAAAGTCTGCTCAAAGTGGCGCATGAAGAT[C/T]GAGACAAGCTGGAGATGACCTGCACAGAGCTACGACAAGAGCTGCAGCAG
Long Flanking Sequence:
CCCTACAGCAGCAAAGGGAGCGCGTAGAACTCTTGGCGCAACAAAACGAGACTCTTCTCCAGAGGCTCAGAGAACAAGCTCAGAGTCAAGAAGCTGAGGCTTCACGTGCCTCTCGGATGGCAGAACTCGAACAGCGTTTGGCTGAGCAAGTAGAGAGTTCGCGATTTGAAAGAGAGAAGCTGGTAGACATCCAGCAGCAGCTGACAGGGAGTCTCAGAGCCTTGGAGAAGGAGAATCAGGAGGCGCAAACTGCTGTGAAGAGCTTAAGGGAAGAAGAAGGGCTTCTGCAAGGGCATCTGGAGAGTGAGAAGCTTGCTAGAGATGAGGCAGTGAGGAAAACTGAGGAACAGAGGCTAGCCATGGAGGCTCTGAGGGTGGACAATGCGAGTATGAAGGCGCAGGTGGAGGTGGAGCGGCAGAAGGTTGCTGAGCTGAAGGCAGTGCAGAGCGCTAGTGACAACACTGAGCTGCAAAGTCTGCTCAAAGTGGCGCATGAAGAT[C/T]GAGACAAGCTGGAGATGACCTGCACAGAGCTACGACAAGAGCTGCAGCAGGTATGCAGTGAAGTAGAAGTTAACAAGGGATAGAACAGGGATGGGCAAACTTGACCCTTGAGGGCTGGTGTTCCTTCAAAGTTTTGCTATAATACATTAATCAGACACACCTAATCAAACGAATTAGTGTTTTCTTTAGTGTCTTGATTAGGGTTGGACCAAAACTATGCAGGACACCAGCCCTCCAGGATCAAGTTTGCATATGCCTGGTATATAACCAGACTGGTAATTTCTAACATAAAGAAGAAGCTACCCAATTTACGATGATCCTAAAATACCCAAAATAATGGGCAGGTTTTTTTTTTTTTGCTAATGCTTTTATGCCAGGGGTCACCAATCTTGGTCCTGGAGGTCCGGTACCCTGCAGGGTTTAGCTCCAACTTGCCTCAACACGCCTGCCTGGGTGTTTCAAGTATACCTAGTAAGAACTTGATTAGCTTGTTCAGGTGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1298
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000047143 | None | None | 1011 | None | 14 |
ENSDART00000137052 | Nonsense | 655 | 1035 | 4 | 14 |
Genomic Location (Zv9):
Chromosome 5 (position 65946035)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 62200943 |
GRCz11 | 5 | 62885669 |
KASP Assay ID:
554-1213.1 (used for ordering genotyping assays)
KASP Sequence:
TGGACCTGGAGAGTATGATTATTATCTSTCTGTCTCTGGCTSTCCGTATA[C/T]AACACTGYCAAATGATCATGATCCCTGCGGCGTGTGTGTTTAACTGCTCT
Long Flanking Sequence:
AGGGTAATTAGGGTAAAAAAATATTGCTTTAGGGGGTCTAATATTGACCTTGAAAATTATTTTTTATAAAATTAAAAACTGCTTTTATTCTAGCCAGAATAAAGCAAATGATATTTTCTCCAGAAGAAAAAATATAAGAGGGAAATACTGTGAAAAATTCCGTGCTCTGTTAAACAAAATTTGGGAAATACTTGAAAAGAAAAAAAAAATCACTAGAGGGTTAATCAACTGACTTCAACTGTATGTGTCTGCAGGTGGAGGCAGACAGACAGCAGCTTCTGGAGAAGGTGGAGAAACAGGAACAAGATCATAAAGCCAACACAAATTCTCTCGAGGAAAAGAGCATAGATGCTGAGAACCAAATCAAGGACCTGAAAGAGACCATCTTCGAGTTGGAGGACCAGGTGGAGCAGCAACGGGCTGTTAGACTGCACACCAACCAGACCATCCTGGACCTGGAGAGTATGATTATTATCTGTCTGTCTCTGGCTGTCCGTATA[C/T]AACACTGTCAAATGATCATGATCCCTGCGGCGTGTGTGTTTAACTGCTCTCTCTCAGCCAATGCTAAATATACTGTATCATCTAGCCTACACACACACAGGCTGGAGTCTGCTGTGATTAGTGAAACACATTGATTGTATCTGGCAGCCTGGATGGATTGAGATACTGAGCTGTTTAGCTATACCCCTCCAGCTTAAACCGTTGCCAAACTGCATCCTGCAGGAATTATATGCAGCATCTGCCTTTCTCTCTAATATGGAGGAGGAAATTTCATGGTGCAGATTATAGTTTTATTGCAGCCTCAGTCTGTTTCCAGCTGCAATGAACCAAATAGCTTCAAATAGCTCCTTATGACACTTTATGTAAACAGTATTTATATTTCAAGAGCAAATGAATTTAGTCCCGGTTTCCAAGAACACGATTTAACACGAGATCAAAAGAAGGAAAGATGTAAAAATGTTTAAATATGCATAGCGTGTGAAATTATTATTTTATAATTA
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa20566
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000047143 | Essential Splice Site | 820 | 1011 | 8 | 14 |
ENSDART00000137052 | Essential Splice Site | 844 | 1035 | 8 | 14 |
Genomic Location (Zv9):
Chromosome 5 (position 65925590)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 62180498 |
GRCz11 | 5 | 62865224 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGCATACCAGTCCGTACAGCTCCCGCTGCTGCCGTCTCACCCATTCAGG[T/C]ACTGCGAATCTCAAAATACACCAGGAGTTTATATGGAGAATGCCATCGCT
Long Flanking Sequence:
GTCTGTCTTTGTTTTGGTCATTTAACCTGCCTAATGCCAGTTTAGCCAATTATATTTCATCAGCCCGTGTTGCCTTGAATGAAAAATATGCTGAATGAAAACAGCATATTTCATTCATTTAGTCAGAAAGGCTCTCTAAGTGTGCATCCATGACCAAAGTGCGACCTCTGGTGGATAGTAGCAGACTGCAACATGAGACAGATTCAGAGTTCCACATGACATGAGGTTATTAATTAGCAAATAATATAAATATTATGAACGTAAACATTATGAAACATTAGGTAACAGCACACTACGTGACGAGATTTGCAGTGATAAGCAATGTTTATTTCTTCATATTTATTTGTGTCTGAAGCAAAGATTTTACAATTAAAATTGTTCCAAATGCATTTCTCTAGATGGATCTAGCAGCTCAGTACAGATACACACATCTCCCAGAAGCCCCCTGAGTGGCATACCAGTCCGTACAGCTCCCGCTGCTGCCGTCTCACCCATTCAGG[T/C]ACTGCGAATCTCAAAATACACCAGGAGTTTATATGGAGAATGCCATCGCTAACATGTGCTTTGTTTTCTAGAGGCACTCTGGAATCAAGCCACTGTCGAAGACCCTCGAGAGAAGAATTGCCTTTGGAGATTTCCCACACAATGGTACTTCACAGTGACACATCCAATTCAAACAACACTTGAGCCATCCCTAAACACCCATACCTATTCATTGATAGAATCTGTTGCATATCATGAAAATAGTAAAGAGTGTGGCGTTGTATTATTCACAGTAATGCATTTTAGTGGATGTCTCTGAACTCTACACACAAAAAATGCTGTTTGTTTCAAACTACTTATTTAAAATGAGCTGAACTGTTTTGTGTTTAAACAACTTCAATTTGTAAAAACTATTATGTTAACTTAATTCTTCATGTTGTCCCAACACAAATCGTTTGTCTGCAACCTAGAATTTTTTACAGAGAAAAGCCCCTAATTCATTGCTAGCCCAAATGAATCGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa38521
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000047143 | Nonsense | 995 | 1011 | 14 | 14 |
ENSDART00000137052 | Nonsense | 1019 | 1035 | 14 | 14 |
Genomic Location (Zv9):
Chromosome 5 (position 65867892)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 62122800 |
GRCz11 | 5 | 62807526 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTGTCTTTGTAGGACTTCGAGGAATTGATGCGCACCGATCGACCCGACT[G/A]GCAAAGCGTCATGCAATACGTGTCTCAGATTTACAAATACTTCGAGACTT
Long Flanking Sequence:
TCAAGAGTATTCTACGCAAAACAAAGCACAATGTATCTGTTGATGGTGGTTTAGTTCAAAACACCAAACGGTCATAGTTTAGTCAAAAAAAGCAGATGGCAAACACAAAAAACACAGAAGGTCAGTTCTTTACAAATGTACAGGGTGGCCATTTATATGGATTCACTGTATTTTGTTAATATTATGTCACTGTAAATATCATAAGTGTGAAAAGGAATAAAATTTGCTGGCATCATGTTGCTGTACTGTTGACTTTACCTAGAAACTGAGGTCAAACATGCAGTATGATTAAGTACATTTTTGCGGTTGTACAAAAATGTAGGCTGAAGCAAGCATTTCCAATGAGCCAGTGTTGGCTTTTATGGCTTAAATAAACTAAACTGAATGCAAAAGTTCACAAGAATCTTCATAGATGAAGTGTTTCCTGCATCTAACTGTCTACATCTGCTCTGTGTCTTTGTAGGACTTCGAGGAATTGATGCGCACCGATCGACCCGACT[G/A]GCAAAGCGTCATGCAATACGTGTCTCAGATTTACAAATACTTCGAGACTTGATTTTTGGACTTTGAAGAGGATGGAGGCACAGAAGCACTTTTATTTGCCAGGTCCAGTTCTTCCAAAAACACACAGTTCTGTATTTATACAACCAGCACATCATATAAGTCCAATAACCACACACACACACACAGAATCCTTCCAGCCTCTAACATCTTCTCTGTCCCTCAAATGTCTCACATGGAGATAACTCAGAATTGTTTGAAGTTGCTTGCAGAGTGTAGGTTAGCAATCTTGCACTAAAACTGGTATAGTTTTTATAGTATGGTCAATTTTGCTAAGAGTTCAAGTGTAGCTGCTAAACTTTATAAAGTGTTATTACCCAAATCTCTATATATATATATTGGCATACTTATGTATTAATATACTTATGGAGGTATTTTTAAATATTTAGTTTTCTCACAAAGACTTTGTCAAACTATATATATTAAAAAAAATAGTTTCATGT
Associated Phenotype:
Not determined