ZMP
snapc4
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate small nuclear RNA activating complex, polypeptide 4, 190kDa (SNA
Human Orthologue:
SNAPC4
Human Description:
small nuclear RNA activating complex, polypeptide 4, 190kDa [Source:HGNC Symbol;Acc:11137]
Mouse Orthologue:
Snapc4
Mouse Description:
small nuclear RNA activating complex, polypeptide 4 Gene [Source:MGI Symbol;Acc:MGI:2443935]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa38504 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa38504
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000097473 | Nonsense | 170 | 393 | 5 | 11 |
| ENSDART00000141424 | Nonsense | 152 | 615 | 6 | 16 |
Genomic Location (Zv9):
Chromosome 5 (position 52875281)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 50542477 |
| GRCz11 | 5 | 51189070 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGGCGAGGAAAAAGAACAACTGAAAGCGCAAATAGAATTAATTGAGAAA[C/T]AAATAGCTGAAATAAGGTAACGTCATTTTAAGCACTTTCATCAGAGAATA
Long Flanking Sequence:
TTAATTGATTTAATTCACCGGATCAGTTTTACACAGATAGCCTCTGTGAGCAAAACCTTAATCAATTTAAAATATCAATATATAATTGTCAATCATCGATAAACGATCATCAATATTTAATGTTTCCATTACACGAGCAAATTCTAATTCTGGTAATTAAAACATAAAAGATTAAACTAACGTCAGATTGTTGCTGTAAATAATAAATGTCATCAATGTTCAGTTATGGAGCGTCAACTAAGGAGGAAACACTAAATTGTTGAACTACATTGGTAACAATGGAACTTGTGTATTTTGAGAAACACACCCCTGTTTCTTCAGTTTTAGTTTTGTTAGCTTGGCTTTTAGAAATACAAGATTTTTTGTGTGCATTTAAATATGTGTGAAAAGCTTGACATGATCTGTGTTTTCTTAGGATGGAATATCTCAGCAACAAACTGTGTAGAGCGGAAGGCGAGGAAAAAGAACAACTGAAAGCGCAAATAGAATTAATTGAGAAA[C/T]AAATAGCTGAAATAAGGTAACGTCATTTTAAGCACTTTCATCAGAGAATATATACGATTATAACTAAATTACTATTCAAAAGTTTGAGGTCAGTAAGATTGTATATGGTGAAGAAATATATTTCATTCAGTCTTTTTAATGTTTCAGCATTCATTATAATTAGAAATTATAATAAGTAATGTTTCTTGAGCACCAAATCACCATATTAGAATGATTTCAGAAAGGTCATGGGACACTAAAGGCTGGATTAATGACAATTAACAATGCAGCTCTTAATCACAGACATATATCATTATTTTAATGAAATAATAAAATACCAAACAGCCATGTTCAATTGTATTAATGTCCCACAGTATTGCTGTGTTTCGGCATTTATTGATTACATAAACACAGCCTTGGTAAGTGCTAGAGCTGAGATGCCAAAACTGGGGGCTGCGAGCCAAAGATGGCCCATGGTAACTTTTGATTTGATTTGGTCCACCAGAAATTGCTGAGCTAGA
Associated Phenotype:
Not determined