ZMP
usp20
Ensembl ID:
Description:
Ubiquitin carboxyl-terminal hydrolase 20 [Source:UniProtKB/Swiss-Prot;Acc:A5PN09]
Human Orthologue:
USP20
Human Description:
ubiquitin specific peptidase 20 [Source:HGNC Symbol;Acc:12619]
Mouse Orthologue:
Usp20
Mouse Description:
ubiquitin specific peptidase 20 Gene [Source:MGI Symbol;Acc:MGI:1921520]
Alleles
There are 5 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa25304 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa17352 | Essential Splice Site | Available for shipment | Available now |
| sa10888 | Nonsense | Available for shipment | Available now |
| sa38483 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa25304
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000006021 | Nonsense | 68 | 913 | 5 | 25 |
| ENSDART00000030969 | Nonsense | 68 | 88 | 6 | 7 |
| ENSDART00000097945 | Nonsense | 68 | 898 | 4 | 24 |
| ENSDART00000111946 | Nonsense | 68 | 340 | 5 | 11 |
| ENSDART00000122077 | Nonsense | 68 | 340 | 5 | 14 |
Genomic Location (Zv9):
Chromosome 5 (position 34920311)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 32702260 |
| GRCz11 | 5 | 33302413 |
KASP Assay ID:
554-7343.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGTACATTTTTGTACATCTGTTTATCTTCTTTTAACTATTTTCCAGGCC[A/T]AAAAGCACAATCTGACAGTAAACCTGACCACATTCAGGGTGTGGTGTTAT
Long Flanking Sequence:
TATATTTTGAAGAAAACTGTAAACCGTAAACATTGATCTGCATAGTAGGAAAAGCAAATACTATGCAAGTCAATGGTTACAGGTTTTCTACTTTCTTTAAAATATCTTTTTTTGTGTTCAACAGAAGAAAGAAACTCAAACCAGGTTTGGGACAAGTGAAGGGAAAGAAAATGGTGACAAGATTTTCAGTTTTGGGTGAACTACTTCTTTAAATGTAACATGCTCTTTTGTTTGGATAATTATGACAGAACATTGCATTATATAGGTATTCAATACAATTCATCCTTATTTTTATAGCGCTTTTAGCAAAATGTAGATTTTGTCAAAGCTGCTTAACATAAAAGTTCTAGTAAAGTCCAGATTTCAGAGTTGAAGTTCAGTTTAGTTCAGTTCAGCATGGTTTAAATTTCACTGCTGTAAGTAACAGGTGTAATAATATGTAACTCTCGAATGTACATTTTTGTACATCTGTTTATCTTCTTTTAACTATTTTCCAGGCC[A/T]AAAAGCACAATCTGACAGTAAACCTGACCACATTCAGGGTGTGGTGTTATGTCTGCGAAAGAGAGGTGTTTCTGGAACCGAAGCCTGTTACTCCTGTATCATCAGCTCACCGCTGCAAACCACATGACCAGGTAGATACGTTAGACTATTTGAAACCGCTCATAGAGTTGCACTTTTAGTATTGTGCAAAGGTTGCTGTTTGAGGTTGGCTGTCTCCTATATAATTAACATCAGTCTGGAGATCCTCTTTAGACAATGTGCTTCATAAAGGTCATGTACAATACAAGATACATAGTTCTGTCTTTTTTTGTTTCACAAAGGATCCTGTTTCGCAGACTACATGTTACCCATTGAAGGCGGTGCCTATCGCAGTGGCAGATGAGGAGGGCTCAGAGTCTGAGGAGGATGAGCTCAAACCTAGAGGTATCATGTATACTGAAAGCTGGTACATGCTACATACCATTTCAAATCTTTTAATAAATGCTAAAAGCAAGAGCACC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17352
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000006021 | Essential Splice Site | 207 | 913 | 8 | 25 |
| ENSDART00000030969 | None | None | 88 | None | 7 |
| ENSDART00000097945 | Essential Splice Site | 207 | 898 | 7 | 24 |
| ENSDART00000111946 | Essential Splice Site | 207 | 340 | 8 | 11 |
| ENSDART00000122077 | Essential Splice Site | 207 | 340 | 8 | 14 |
Genomic Location (Zv9):
Chromosome 5 (position 34922506)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 32704455 |
| GRCz11 | 5 | 33304608 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGTGTAAAAGCTATCAGAAGCTTATCTCTGAACTCTGGCACAAGAAACGG[T/A]AACAAGCACTGACTTGCCAGACCGYTAACGWAGATCTGGCCTGTTCTGTT
Long Flanking Sequence:
CTGAAACTTTACAGACACATTCTGGAGACACCAAAGGCTTATCTTACATCTTGTAAAAAGGGTAAAATATGTGCCCTTTATATTGTATCTTATTGTCAGTTGTTGTGTTTTCAACAGCTAAAATTCAACACTTCAAAATTAGTCATAGTAAGCTTCATTGTGTTATTTTCTAATACTCTTTACCCTTCCCAGGTCTGACAGGGATGAAAAACATTGGAAACTCTTGTTATATGAATGCTGCACTGCAGGCCTTGTCCAACTGGTAGGCTTAAAATCCTGACACAGATTTGTTGAGTGACTGATTGCACTGATTGATTTCTCAGGTCTGCGCGTCCAGCTCTTTAACTGACTTTGGGTTTCCTGCTTCTTTATATTCATTTCCCAGTCCTCCTTTGACTCAGTTTTTCCAGGATTGCAGTGGATTGGTGCGTACGGATAAGAAGCCGGCATTGTGTAAAAGCTATCAGAAGCTTATCTCTGAACTCTGGCACAAGAAACGG[T/A]AACAAGCACTGACTTGCCAGACCGTTAACGTAGATCTGGCCTGTTCTGTTGAACTTAATCTATTGATTTTGGTCATAATTAAGTATCCATATTGTTGCCTATGGCCTTTCTTTTTCTCTCTTTTGTGCTTTCTTTGGCCCTCTGTCCAGGCCGAGTTATGTTGTGCCAACTACTCTGTTTCATGGAATCAAACTGGTGAACCCCATGTTTCGTGGCTATGCTCAACAGGTATAAAGCAGTGTTATTTTAGTAAAGTCTGTATACTACTATTTCATGCAGTGCTTCCCACAGGTAAACTTTTATTGAGCTTACCGCTCAAGTATGTTAATTTTTTTTTGTATCCGCCCAATAGAACGAAACATCTACAATCGATTAAGTAGTGGAAAATCTTCTCTCGTTTACCCGTTTCATGCTCGATCTGTGTGGTTAAGACCTGTCGACCCTTTCACAGACAGTTTCACATTCTATAAACACCCACAGAGATGCGCTTTTTTTGTCAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10888
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000006021 | Nonsense | 507 | 913 | 13 | 25 |
| ENSDART00000030969 | None | None | 88 | None | 7 |
| ENSDART00000097945 | Nonsense | 492 | 898 | 13 | 24 |
| ENSDART00000111946 | None | None | 340 | None | 11 |
| ENSDART00000122077 | None | None | 340 | None | 14 |
Genomic Location (Zv9):
Chromosome 5 (position 34928872)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 32710821 |
| GRCz11 | 5 | 33310974 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCCATTCACCAGAGTGCACCTGTKAAAGCTGGTGTCTGCACTGATGGCTA[T/G]GCTGCACAGGGCTGGATCTCCTACATCATGGACTCTATACGAAGGTATAG
Long Flanking Sequence:
AAGAAGAAGCAGTCCCGTTTCCGTAGTGTTATTTCCGATATCTTTGATGGATCCATTCTGAGTCTTGTTCAGTGTTTGACATGTGACCGGGTGAGCAGGGATGCCAGCATCTTTTATTTTGTCTCTAGAGGGCGCCAAGCATCAAATTACATTTAAAACACTTCAAAATGCACTACTACAGTTTATTCGCGACTGTGCTCATTTATAAACCATGTAGTTCATTTAAGGTCACATCTAGAAAAAAACTGCAATGCATAGCAGCACAGAACAGCCCTTATATACATGAATCATATTGAGGATATTTTTCAAAAATACAGTATGTTTAAGACTGCAGACACACAAAAGGTTTAACAAAACTATTTGGCTTTGCAGGTTTCGACAACTGTGGAGACGTTTCAGGACCTTTCTTTGCCTATACCCGGTAAAGAAGATTTGGCTAAGCTTCATTCCTCCATTCACCAGAGTGCACCTGTTAAAGCTGGTGTCTGCACTGATGGCTA[T/G]GCTGCACAGGGCTGGATCTCCTACATCATGGACTCTATACGAAGGTATAGTAAGACAGTGATTGGACAGAGAATGAACAAAGAGTCAAAAAAGGATTTGACAAAAAGAAAAATTCACCCAAAAATGAAAATTTAGTTTTTAATTTTTCACATTTATGTTGACCTTCTTAGACCTTTATTCATCTTCAGAACAGAAATGAATCTCTTTAGCTCTTTGACCCTCCATGGACAGCAACAGTCCTAAGATGAATCTAAAACGTCAGAACATTTGGTAACGCTTTAGATTAGGTCACAATCACAGCATTAAAGGGTCATGACACCCCCACTTTCGGGTCCACCTCAGAATTTTTTCAAAAGATGCATCATAGTGGGCGTGGAGCTCCACGAGCAAAGGGCAGGAGTGGGCGTGGCCAGAAGAGCAGGGGAGAAGGAGGGGAGCGAGCAACTGTCAGTCAGTTTACAAAATGAGACACAAACCATGCGGAGACCCATGATTTTATA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa38483
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000006021 | Nonsense | 792 | 913 | 21 | 25 |
| ENSDART00000030969 | None | None | 88 | None | 7 |
| ENSDART00000097945 | Nonsense | 775 | 898 | 21 | 24 |
| ENSDART00000111946 | None | None | 340 | None | 11 |
| ENSDART00000122077 | None | None | 340 | None | 14 |
Genomic Location (Zv9):
Chromosome 5 (position 34936902)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 32718851 |
| GRCz11 | 5 | 33319004 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTGAATCACTTATATGTGTGTGCAATTTGCCAAGTGGAGATCGAGACCT[T/A]AGCCAAACGACGGAAACTGGAGATAGACACCTTCATTAAGGTGAACAAAT
Long Flanking Sequence:
GTATGCATATATATTATTATTATTATTTTTTTTCACTTGCTGTAGCAGTGGAAACTAAAATGATATATTAATTTCTACAGGAATTCCTCCTACGAAGTACCATTATGTGGATGATCTGGTTGTGATCCTTCCTCAAAATGTGTGGGAATATCTCTACAACAGGTGAGTCATACATAGCAATGCACAAAATTGACCTTTTGGACGTCCTCAACATTTATTACCTTCTAGAACATGGGATGATACTTAAACATTTGATCTTGTCAAGTCAACAAAACCAATGCTGAACTAAAAAAAATGTGAATGGTTTTCTGCCTGATGTCATGTGCGAGGAACTCCTCTTGCCGTGCAATATAAACAATGTTGAGTTATGTGTTTGCTCTTTTCACTGGCCATACTTGTGTAATTCCTCATGTTTTGAAATATTTTTCACAGGTTTGGAGGTGGCCCGGCTGTGAATCACTTATATGTGTGTGCAATTTGCCAAGTGGAGATCGAGACCT[T/A]AGCCAAACGACGGAAACTGGAGATAGACACCTTCATTAAGGTGAACAAATGACCATTACAGAATTACAGAACTCCTGTCTGTGAGTGTGATGTTTAAAATAGGAAGTGGCATTCATGAACAGCCAAATGCCTCAGACTTTAACATGTCGCCTTGTTTTTGAGCATCAAAATTATATTGTGAGAACACACTACATGGGTTTAACTGCTGTCTTGGCCTAAAGGATGATTTATACTTTTGCCTGGGTCTGCAGCGAGACCTTCCATTGACTGCCGTGAGTTTTGCCTCGAGGCTTTCATGCTTGATGCTATTGCCATTGTACTATTTTTTAATAACAACAGGGGAGGGACTTGGAATAACTGCCCTGACGACAGTGGCGAAAAAATAGTCAGGGATTGGAGTTGTTAAATGAATTAATTGTATATAAAATGAAATTGTTTTCAGTAACTTAAATAAAATTATTAGTAAATTAGTAACTTGTGCTGCATTTTATACATCCAAG
Associated Phenotype:
Not determined