ZMP
casp6l1
Ensembl ID:
ZFIN ID:
Description:
caspase 6, apoptosis-related cysteine peptidase, like 1 [Source:RefSeq peptide;Acc:NP_001005973]
Human Orthologue:
CASP6
Human Description:
caspase 6, apoptosis-related cysteine peptidase [Source:HGNC Symbol;Acc:1507]
Mouse Orthologue:
Casp6
Mouse Description:
caspase 6 Gene [Source:MGI Symbol;Acc:MGI:1312921]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa1603 | Essential Splice Site | Available for shipment | Available now |
| sa10094 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa1603
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000041414 | None | None | 242 | None | 6 |
| ENSDART00000125012 | Essential Splice Site | 11 | 569 | 1 | 15 |
| ENSDART00000136919 | None | None | 249 | None | 6 |
| ENSDART00000146586 | None | None | 169 | None | 6 |
| ENSDART00000147374 | None | None | 253 | None | 7 |
The following genes are also affected by this mutation:
Genomic Location (Zv9):
Chromosome 3 (position 33102708)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 32834018 |
| GRCz11 | 3 | 32965732 |
KASP Assay ID:
554-1544.1 (used for ordering genotyping assays)
KASP Sequence:
RCATTCACATAAATAACGATGGCAAGTCACACTAAGAGCGACGGATCCGG[T/A]AAGGGATTAGTTTAGTTTCTCTGTATGGAGATAAATAACTTGAATGTGTG
Long Flanking Sequence:
GTTTGCAGCTGTAAGGTCATCCACTGTGTAAAATCATATGCTGAATAAGTTGGTGGTTCATTTCACTGTGGCGACTCCTGATCAAATAAAGAGACTAAGCCGAATGAATGAATAAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAATTCAATGCGGAAGTAACCAACTGAGTTCCACCAAAGGTTTGCAGAGTTGTGATTGGGTAACGTTGTAGTGTCCTGTGATTGGTTAAAGATTTAGTGACCCACGATAGGTTTACTGTTGCACTTGGTGACTGGTCTGTGTTTGCTGAAGTTGGTTTGTCTCTACATTTCTTCTCAATTTCGCCTACATTCACATAAATAACGATGGCAAGTCACACTAAGAGCGACGGATCCGG[T/A]AAGGGATTAGTTTAGTTTCTCTGTATGGAGATAAATAACTTGAATGTGTGTAGCTACACTGTGAATGCTGTTCATGTGAGACCGCGAGTTTCATTTCCTTATTTTAGCACCTGATAAAGGTAGAAGGTATTTGTTCACAAATAACACCTTTTCGCGTTAAAACACATAAAATGTCAACTACAATGTTTGACTAAATGAGTTCATACTTACTGTAACTTGAGTCACAGCGCTTATAAAAAGAGTGTATTTTTTGTTTTAGCAGCTGTGGAGAAGGACAGCGCTTCAGCAGGACAGACAGGTAAAACTGAATCCACTTTATTGTCGTGTTTGTTCCAAGTATCAGAATGAGTGGAAATAGTTTGTATGGAGTGTAAATATAGCATTATTAGCCTATGTCTACTCTGCTTTGCTAGACAGCCTGTTTGCAAAGCCATTGAAATCCAGCTTGACCAGGTGCTCAATAAACAATACAGGCTTGACCTCAGTATATGTTCAGTGAA
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa10094
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000041414 | None | None | 242 | None | 6 |
| ENSDART00000125012 | Nonsense | 66 | 569 | 4 | 15 |
| ENSDART00000136919 | None | None | 249 | None | 6 |
| ENSDART00000146586 | None | None | 169 | None | 6 |
| ENSDART00000147374 | None | None | 253 | None | 7 |
The following genes are also affected by this mutation:
Genomic Location (Zv9):
Chromosome 3 (position 33101569)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 32832879 |
| GRCz11 | 3 | 32964593 |
KASP Assay ID:
2259-3702.1 (used for ordering genotyping assays)
KASP Sequence:
CCACAAGAGACGGGGAATGGCTCTCATATTTAATCATGAAAATTTCTTTT[G/A]GAAACTGGGATTGGGCTACCGTTCTGGAACRAATGCAGACAAGGAGAACC
Long Flanking Sequence:
GCTACAAAAGCTGTCACTGTGGAGGTACCCTTTCAAAAAGGGATACATTTTTACCTAAAGGGTCTATATATTGATACCTTAGTACAATAGTATCTTTTGAAAATTAAAGTACTAATGATATTACCTCTAACATAAGTAATATGTAAAAAAAAAAAAAAAAAAAAAAAAAACTAATATGTATCTTTTAGGTGCATACATGTACCTTCTGCAAGGGTACCACCCCATTGACAGCTCTGTACCTTTAATGTCTAGAGTGTGTGCAAGCCAAATGTTTGATGGTGTTTTCTTTTTTCAGTTGAAGAGAACCTGACAGAGACTGATAGCTTTAATCAAAGGTATTTTGCCAAAGATTGTAATCATATTAGTAATGGGGAATGTACTATACTTATGTATAAATAAATTGTTTGACAGTATATTTAGTATGGATCCTAATCAGGAGTATGATATGAACCACAAGAGACGGGGAATGGCTCTCATATTTAATCATGAAAATTTCTTTT[G/A]GAAACTGGGATTGGGCTACCGTTCTGGAACAAATGCAGACAAGGAGAACCTTATTAGAAGGTATTTAACCAAGCAAACAAAAAGTCCTATTAGTTGTGCATGCTAATATTGTACTGTTTTCTGGTCTTGGATTAAAGTTACTTTTGTTAATTTTTCTCTATAACTGTTGGTAGATTTCGAGAGCTGAATTTTGAAGTTAAAGCTTTTGATGATTACAAACGACATGAAGTTTTGTCCAAAATCACAGAGGGTATGTGTTGCTTGTATCTTTCATATATTCTCTTTAAGGCTAATTTTTTCATAATTTGCAAGCGTGCTAATTGAGCATGCTGAAATGACAAATGTTATTTGTTAAATTTAAAAACATTAATTATCCATATTTTTTCTACTAATTCTACTGATATGTAGCTGTTAAAATAATATTATATTTGTTATGTAAATCCAATTAACCTGTTTAATTGTATTTGATTTAGGTCTAAGAATATATCGGTGTAAAATAA
Associated Phenotype:
Not determined