ZMP

calrl

Ensembl ID:

ENSDARG00000020103

ZFIN ID:

ZDB-GENE-030131-9907

Description:

calreticulin like [Source:RefSeq peptide;Acc:NP_958873]

Human Orthologue:

CALR

Human Description:

calreticulin [Source:HGNC Symbol;Acc:1455]

Mouse Orthologue:

Calr

Mouse Description:

calreticulin Gene [Source:MGI Symbol;Acc:MGI:88252]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa19907	Nonsense	Available for shipment	Available now
sa25938	Nonsense	Mutation detected in F1 DNA	Not yet available
sa38361	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa19907

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000025570	Nonsense	90	417	3	9

Genomic Location (Zv9):

Chromosome 2 (position 55844059)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	55669548
GRCz11	2	55793393

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CTCGTTTCTACGCCACCTCTGTCCGCTTCGAGCCCTTTAGCAATGAGGGC[A/T]AAACACTGGTGATCCAGTTTACGGTTAAACACGAGCAGAAGATCGACTGT

Long Flanking Sequence:

GAAAATATACGATACAATAATTGTTGCTATTATTGTTTGCAATATAACATTTCCCAACAGCTACTTTATTTATGTAATAATACTAAAATTAATGGGTAATAGATATTTATCTGATCTAATTTCATTTAATTAAGCCTGTCACAATGTCTTCTATTGTTGTACGATATATTGCACCAAAATATATTGCGATATTATTTCCATTTTAAGACCATTTTATGCATTCATTATATAACGCCAGAATGACAATATAATATCATCACAATGCAGGTACGCTCTTTCAAAGATCACATCATATTTTATGTAATTTCATTGAATTTCTTTGGTTCTTTCAGTATAGTTTAGGAGATTTGAAAAAGGAGTGTGAATAATTTTGACGTATACTGTATTTGAGTTTTGCATCACTTTTATTATCACTTTGTCCATCAACAGGCCTGCAGACCAGTCAAGATGCTCGTTTCTACGCCACCTCTGTCCGCTTCGAGCCCTTTAGCAATGAGGGC[A/T]AAACACTGGTGATCCAGTTTACGGTTAAACACGAGCAGAAGATCGACTGTGGAGGCGGATACGTTAAAGTCTTCCCAGCTGATCTCAACCAGGCGGACATGCACGGCGACTCCCAGTATTACATCATGTTTGGTACATTGAGCAAAAATTTCTGGTTACCACCTTTTTAAACAGACTCGTGTTCATTAAAATACAGTTGTGGACAAAATTGTTGGTACACTTCAGTGTTGTCCATGGGAGGTTTATTAGTTTGCCTATTATGCTTTATTAAGGGGTTTTAAACATGGGCAGCAGTGTGTAAATAATAATATAAGCAACTTCTTGTGGTAAAAAATTTATTATTTGTATTGTTTATAATCAGACTTGATGAAATCAGTCTGCAGAAACACTTTAATTGACATTCTCCTTTTGTACGTGTCATCAGAGGGGGAAAACCCCGCCCACTAGTGACCATCACTCCCTCATTAGCATAGGTTATTAGTCTTGTTATTGAATCTGCC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa25938

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000025570	Nonsense	102	417	3	9

Genomic Location (Zv9):

Chromosome 2 (position 55844095)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	55669512
GRCz11	2	55793357

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TTAGCAATGAGGGCAAAACACTGGTGATCCAGTTTACGGTTAAACACGAG[C/T]AGAAGATCGACTGTGGAGGCGGATACGTTAAAGTCTTCCCAGCTGATCTC

Long Flanking Sequence:

TTGCAATATAACATTTCCCAACAGCTACTTTATTTATGTAATAATACTAAAATTAATGGGTAATAGATATTTATCTGATCTAATTTCATTTAATTAAGCCTGTCACAATGTCTTCTATTGTTGTACGATATATTGCACCAAAATATATTGCGATATTATTTCCATTTTAAGACCATTTTATGCATTCATTATATAACGCCAGAATGACAATATAATATCATCACAATGCAGGTACGCTCTTTCAAAGATCACATCATATTTTATGTAATTTCATTGAATTTCTTTGGTTCTTTCAGTATAGTTTAGGAGATTTGAAAAAGGAGTGTGAATAATTTTGACGTATACTGTATTTGAGTTTTGCATCACTTTTATTATCACTTTGTCCATCAACAGGCCTGCAGACCAGTCAAGATGCTCGTTTCTACGCCACCTCTGTCCGCTTCGAGCCCTTTAGCAATGAGGGCAAAACACTGGTGATCCAGTTTACGGTTAAACACGAG[C/T]AGAAGATCGACTGTGGAGGCGGATACGTTAAAGTCTTCCCAGCTGATCTCAACCAGGCGGACATGCACGGCGACTCCCAGTATTACATCATGTTTGGTACATTGAGCAAAAATTTCTGGTTACCACCTTTTTAAACAGACTCGTGTTCATTAAAATACAGTTGTGGACAAAATTGTTGGTACACTTCAGTGTTGTCCATGGGAGGTTTATTAGTTTGCCTATTATGCTTTATTAAGGGGTTTTAAACATGGGCAGCAGTGTGTAAATAATAATATAAGCAACTTCTTGTGGTAAAAAATTTATTATTTGTATTGTTTATAATCAGACTTGATGAAATCAGTCTGCAGAAACACTTTAATTGACATTCTCCTTTTGTACGTGTCATCAGAGGGGGAAAACCCCGCCCACTAGTGACCATCACTCCCTCATTAGCATAGGTTATTAGTCTTGTTATTGAATCTGCCACTATGCTGACACACAGGCATTTGTAGCTCCGCCCT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa38361

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000025570	Essential Splice Site	273	417	6	9

Genomic Location (Zv9):

Chromosome 2 (position 55849455)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	2	55664152
GRCz11	2	55787997

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CATGGATGGAGAGTGGGAGCCTGCCATGATCCCTAACCCCGAGTACAAGG[T/A]ACAGATTCACATGCTATTCACACGCTACTAAAAAGTAAAAGTAAATTATT

Long Flanking Sequence:

AGAGTTGCAGTTATCCAGTCTGGAGAGAACAAGAGCTTGAACAAGGAGTTGAGCTGCATGTTTAGATAAGAGTCGGACCTTAAATTATTTTAATGGTGAATCTAAAGAAGCAGACTAAACTGTCTAAAGTGTAATTCACCAGCATTAACGTCTCGTTTTAACTAACTTTTACTGTCAAATACAGTACTTTTTGCTTGCTTGTCATATTACTGAACTACATATTTCAAATAAACCTATACTTTTTGCAAAACTTTTACATTTATTTATTTATTTTTTTGCTTAATGATTGACAATCAGTGAAAATGGTTAAAACAAATAATAATATTATAGACTTAAATGGCAGAGAAGGTCAGTTTTATAAATCCTGCTTTCTGACATTTATCAGGACTGGGATAAGCCCGAGAATATCCCCGATCCTGATGCTAAGAAGCCAGAAGACTGGGATGAGGACATGGATGGAGAGTGGGAGCCTGCCATGATCCCTAACCCCGAGTACAAGG[T/A]ACAGATTCACATGCTATTCACACGCTACTAAAAAGTAAAAGTAAATTATTTGTGCTCATTGATTTCAGACTGTGATTGTATTATTGTTCTGTTATGGCGCAGGGTGAGTGGAAACCCAAACAGATTGACAACCCGAACTACAAGGGCGCCTGGGTGCATCCTGAAATCGATAACCCAGAACACGTTCCTGATGACCAGATCTACAAATTCGACAATATTGGAGTCCTTGGGCTGGATCTCTGGCAGGTAAGAATGCTTACATTTACAGTTCTCCGCAAAAACAAGTACACCCTATTTTAAAAATGATGATTTTTTTTTTATCCATTTCTCGATTGTAGGTCATATATTTGAGTGCATTTGAACAAAACATAGTTATTAAACAGATGCATTTATTAAAGTAGTAATTTAGCCACTTATAGCTTTTAAATAAATATAGAATTGTATTAAATATTGTCAAATGCATATTTTTTTATTGTCTTTGTTTTGTTTTTTTTTCATTT

Associated Phenotype:

Not determined